FFCP PHASE1:Mm9::chr2:172219302..172219329,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320664 | |EntrezGene=320664 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |MCL_coexpression_id=3 | ||
|TSSclassifier=NA | |||
|UniProt=Q08EC4 | |UniProt=Q08EC4 | ||
|association_with_transcript=0bp_to_ENSMUST00000103073_5end | |association_with_transcript=0bp_to_ENSMUST00000103073_5end | ||
|cluster_id=chr2:172219302..172219329,+ | |||
|description=CAGE_peak_2_at_Cass4_5end | |description=CAGE_peak_2_at_Cass4_5end | ||
|id=chr2:172219302..172219329,+ | |id=chr2:172219302..172219329,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.39e-10,14;UBERON:0000117,7.39e-10,14;UBERON:0000171,7.39e-10,14;UBERON:0000170,7.39e-10,14;UBERON:0005597,7.39e-10,14;UBERON:0000118,7.39e-10,14;UBERON:0005153,2.01e-09,17;UBERON:0005178,1.07e-07,17;UBERON:0005181,1.07e-07,17;UBERON:0002224,1.07e-07,17;UBERON:0000915,1.07e-07,17;UBERON:0008947,1.07e-07,17;UBERON:0003258,1.07e-07,17;UBERON:0005157,1.32e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.703943610758334,0.234064526321993,0,0,0,0,2.6648780945253,1.21485160433896,1.39912375625629,1.57731082679119,1.91960207048034,0.84877930359606,0.510259740906419,2.28369187762036,4.17919662622297,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,15.4856703372656,7.0320181007142,4.71171369576418,9.99993529652724,20.4913645487534,13.5942898848723,0,0,0,0,0,0,0,0,0,1.8456086666351,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0.579728977403356,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.73238497482646,0,0,0.304465478312141,0,0,0,0.125666591329675,0,1.59059292611903,1.76922110389975,0.647067399789637,1.10420759230197,0.969750506270444,1.86391761218122,0,0,1.27728527604296,2.63593273913025,1.19980546198682,2.54140454146129,0.149790639404823,0,0,0,0,0.20778804455956,0,0.407357455401265,1.36847667671102,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0.702213187313235,1.02939162845886,1.70498099637356,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0.805238512562231,0.210289948564127,0,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,1.08069024937347,0.796565093017469,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.470996183524124,0.246794327843601,0,1.00107063429656,0.786235980452812,0.899448449539415,0.608580364165509,0.241177159752417,0.50925170356284,1.15078454980324,0.810676133875177,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,2.95605104266567,0.189491411770485,0,0,1.64283173801951,1.34005005953453,1.19021820443007,0.975668239288994,2.99506773801763,2.87904096543407,3.98636921643718,2.78567635016755,3.62638461918381,2.74833211304872,0,0.54390568381871,1.96705709207614,0.275936746304732,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,1.31976098378028,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0.164549020602121,0,0,0,0.441056796109924,6.10079135883476,0.484393280087717,0.603129249281559,0.119372344003136,0.328281799490123,1.45740418314925,0,1.36696704638282,0,0.740778109478847,0.565105371014073,0.546776910884101,1.14389086603261,3.0596117398894,2.93898049879682,3.04039942369732,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.41326727862668,0.523511883968059,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0.651021924219751,0.209718688851422,0.724752362478018,0.288030006257865,2.21207784439725,0.202725215290164,0.205421914329655,0.129920822977795,0.716106782669926,1.19208812868759,0.480781798079875,1.62458479892035,0.605798699688886,0.685861259894999,0.907435666231565,1.36441033035653,1.25075394132428,1.16876902181569,0.680191150845634,0,0,0,1.35232715822533,1.50145980360946,0.36630324853453,1.71494703263253,1.50471631210609,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0,0.675022500231806,0,0,0,0.207574695168353,0.399024873401031,0,0.486213434136588,0,0.551530525350042,0.666740183404846,0.412070114477788,0,0.252697211763798,0.50695859978048,0.754505365544305,0.280924522409647,0.448176066834085,0.459483751644906,0,0.115884325944855,0.38581844092741,0,0,0.685738504770831,0.354951612318675,0.238436189947321,0.581385666529314,0.564656282491984,0.0846146078916765,0.914639864363863,0.789209134313529,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,1.07435527024149,0.382576664137687,0.882365676478062,1.39120701372253 | |phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.703943610758334,0.234064526321993,0,0,0,0,2.6648780945253,1.21485160433896,1.39912375625629,1.57731082679119,1.91960207048034,0.84877930359606,0.510259740906419,2.28369187762036,4.17919662622297,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,15.4856703372656,7.0320181007142,4.71171369576418,9.99993529652724,20.4913645487534,13.5942898848723,0,0,0,0,0,0,0,0,0,1.8456086666351,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0.579728977403356,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.73238497482646,0,0,0.304465478312141,0,0,0,0.125666591329675,0,1.59059292611903,1.76922110389975,0.647067399789637,1.10420759230197,0.969750506270444,1.86391761218122,0,0,1.27728527604296,2.63593273913025,1.19980546198682,2.54140454146129,0.149790639404823,0,0,0,0,0.20778804455956,0,0.407357455401265,1.36847667671102,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0.702213187313235,1.02939162845886,1.70498099637356,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0.805238512562231,0.210289948564127,0,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,1.08069024937347,0.796565093017469,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0.470996183524124,0.246794327843601,0,1.00107063429656,0.786235980452812,0.899448449539415,0.608580364165509,0.241177159752417,0.50925170356284,1.15078454980324,0.810676133875177,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,2.95605104266567,0.189491411770485,0,0,1.64283173801951,1.34005005953453,1.19021820443007,0.975668239288994,2.99506773801763,2.87904096543407,3.98636921643718,2.78567635016755,3.62638461918381,2.74833211304872,0,0.54390568381871,1.96705709207614,0.275936746304732,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,1.31976098378028,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0.164549020602121,0,0,0,0.441056796109924,6.10079135883476,0.484393280087717,0.603129249281559,0.119372344003136,0.328281799490123,1.45740418314925,0,1.36696704638282,0,0.740778109478847,0.565105371014073,0.546776910884101,1.14389086603261,3.0596117398894,2.93898049879682,3.04039942369732,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.41326727862668,0.523511883968059,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0.651021924219751,0.209718688851422,0.724752362478018,0.288030006257865,2.21207784439725,0.202725215290164,0.205421914329655,0.129920822977795,0.716106782669926,1.19208812868759,0.480781798079875,1.62458479892035,0.605798699688886,0.685861259894999,0.907435666231565,1.36441033035653,1.25075394132428,1.16876902181569,0.680191150845634,0,0,0,1.35232715822533,1.50145980360946,0.36630324853453,1.71494703263253,1.50471631210609,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0,0.675022500231806,0,0,0,0.207574695168353,0.399024873401031,0,0.486213434136588,0,0.551530525350042,0.666740183404846,0.412070114477788,0,0.252697211763798,0.50695859978048,0.754505365544305,0.280924522409647,0.448176066834085,0.459483751644906,0,0.115884325944855,0.38581844092741,0,0,0.685738504770831,0.354951612318675,0.238436189947321,0.581385666529314,0.564656282491984,0.0846146078916765,0.914639864363863,0.789209134313529,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,1.07435527024149,0.382576664137687,0.882365676478062,1.39120701372253 | ||
|short_description=p2@Cass4 | |short_description=p2@Cass4 | ||
}} | }} |
Latest revision as of 05:57, 26 September 2015
Short description: | p2@Cass4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cass4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000103073_5end |
EntrezGene: | Cass4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 7.39e-10 | 14 |
respiratory tube | 7.39e-10 | 14 |
respiration organ | 7.39e-10 | 14 |
pair of lungs | 7.39e-10 | 14 |
lung primordium | 7.39e-10 | 14 |
lung bud | 7.39e-10 | 14 |
epithelial bud | 2.01e-09 | 17 |
thoracic cavity element | 1.07e-07 | 17 |
thoracic segment organ | 1.07e-07 | 17 |
thoracic cavity | 1.07e-07 | 17 |
thoracic segment of trunk | 1.07e-07 | 17 |
respiratory primordium | 1.07e-07 | 17 |
endoderm of foregut | 1.07e-07 | 17 |
epithelial fold | 1.32e-07 | 20 |