FFCP PHASE1:Hg19::chr2:202563414..202563426,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:202563414..202563426,-
|short_description=p6@MPP4
|description=CAGE_peak_6_at_MPP4_5end
|association_with_transcript=0bp_to_ENST00000315506,ENST00000315549...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58538 | |EntrezGene=58538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13680 | |HGNC=13680 | ||
|TSSclassifier=strong | |||
|UniProt=F8WC25,F8WDZ0,C9K002,Q96JB8 | |UniProt=F8WC25,F8WDZ0,C9K002,Q96JB8 | ||
|association_with_transcript=0bp_to_ENST00000315506,ENST00000315549,ENST00000359962,ENST00000374605,ENST00000409474,NM_033066,uc002uyk.3,uc002uyl.3,uc002uym.1,uc002uyn.2,uc010ftk.2_5end | |||
|cluster_id=chr2:202563414..202563426,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_6_at_MPP4_5end | |||
|id=chr2:202563414..202563426,- | |||
|ontology_enrichment_celltype=CL:0000359!1.61e-24!32;CL:0000192!7.79e-19!42;CL:0000514!7.79e-19!42;CL:0000680!2.35e-16!57;CL:0000056!2.35e-16!57;CL:0000355!2.35e-16!57;CL:0000222!8.80e-16!119;CL:0000055!1.67e-15!180;CL:0000187!1.47e-14!54;CL:0000183!4.27e-14!59;CL:0002539!2.29e-13!10;CL:0000393!1.88e-12!60;CL:0000211!1.88e-12!60;CL:0002139!1.39e-11!24;CL:0000071!1.16e-09!18;CL:0002546!1.16e-09!18;CL:0002544!2.83e-09!6;CL:0002594!6.32e-09!4;CL:1000413!3.22e-08!9;CL:0000048!4.50e-08!430;CL:0002371!8.11e-08!591;CL:0000723!1.01e-07!436;CL:0000034!2.83e-07!444;CL:0000057!2.94e-07!75;CL:0000144!3.38e-07!625;CL:0000115!5.87e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.00e-15;32!CL:0002591;8.17e-12;1!CL:0002539;5.35e-10;10!CL:0000192;1.10e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.69e-15,32;CL:0002591,8.64e-12,1;CL:0000192,3.21e-11,43;CL:0000514,3.21e-11,43;CL:0000680,1.32e-10,58;CL:0000056,1.32e-10,58;CL:0000355,1.32e-10,58;CL:0002539,5.28e-10,10;CL:0000222,7.63e-09,121;CL:0000187,1.26e-08,55;CL:0000393,1.04e-07,61;CL:0000211,1.04e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.10e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!4.09e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.26e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.25e-35!42;UBERON:0003509!4.25e-35!42;UBERON:0004572!4.25e-35!42;UBERON:0000055!1.60e-29!69;UBERON:0001981!2.97e-29!60;UBERON:0007500!2.97e-29!60;UBERON:0004537!2.97e-29!60;UBERON:0006965!2.97e-29!60;UBERON:0002049!8.77e-28!79;UBERON:0007798!8.77e-28!79;UBERON:0004573!4.92e-26!33;UBERON:0004571!4.92e-26!33;UBERON:0004872!1.64e-23!84;UBERON:0004535!2.77e-20!110;UBERON:0000947!4.98e-20!21;UBERON:0010191!4.98e-20!21;UBERON:0001009!1.97e-19!113;UBERON:0004290!1.68e-15!70;UBERON:0001134!8.28e-15!61;UBERON:0002036!8.28e-15!61;UBERON:0003082!8.28e-15!61;UBERON:0003914!1.10e-14!118;UBERON:0002385!4.12e-14!63;UBERON:0001015!4.12e-14!63;UBERON:0000383!4.12e-14!63;UBERON:0000914!5.75e-14!83;UBERON:0002329!5.75e-14!83;UBERON:0003077!5.75e-14!83;UBERON:0003059!5.75e-14!83;UBERON:0007282!5.75e-14!83;UBERON:0009618!5.75e-14!83;UBERON:0007285!5.75e-14!83;UBERON:0004237!2.29e-13!10;UBERON:0004695!2.29e-13!10;UBERON:0002111!2.29e-13!10;UBERON:0004178!2.29e-13!10;UBERON:0000486!3.68e-13!82;UBERON:0000490!6.87e-13!138;UBERON:0001135!3.08e-10!15;UBERON:0001986!1.16e-09!18;UBERON:0004638!1.16e-09!18;UBERON:0004852!1.16e-09!18;UBERON:0001310!6.32e-09!4;UBERON:0003915!3.22e-08!9;UBERON:0004700!3.22e-08!9;UBERON:0001917!3.22e-08!9;UBERON:0000487!1.67e-07!22;UBERON:0000992!3.02e-07!13;UBERON:0002118!3.12e-07!5;UBERON:0004532!3.12e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.17e-12;42!UBERON:0003509;7.17e-12;42!UBERON:0004572;7.17e-12;42!UBERON:0004573;4.86e-10;33!UBERON:0004571;4.86e-10;33!UBERON:0004237;5.35e-10;10!UBERON:0004695;5.35e-10;10!UBERON:0002111;5.35e-10;10!UBERON:0004178;5.35e-10;10!UBERON:0002118;2.57e-09;5!UBERON:0000947;3.38e-08;21!UBERON:0010191;3.38e-08;21!UBERON:0007500;1.51e-07;56!UBERON:0001981;1.51e-07;56!UBERON:0004537;1.51e-07;56!UBERON:0001135;7.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.03e-15,42;UBERON:0003509,6.03e-15,42;UBERON:0004572,6.03e-15,42;UBERON:0000055,6.20e-14,68;UBERON:0007500,3.45e-13,59;UBERON:0001981,3.45e-13,59;UBERON:0004537,3.45e-13,59;UBERON:0006965,3.45e-13,59;UBERON:0002049,5.67e-12,78;UBERON:0007798,5.67e-12,78;UBERON:0004573,5.18e-11,33;UBERON:0004571,5.18e-11,33;UBERON:0004237,5.28e-10,10;UBERON:0004695,5.28e-10,10;UBERON:0002111,5.28e-10,10;UBERON:0004178,5.28e-10,10;UBERON:0001134,7.34e-10,62;UBERON:0002036,7.34e-10,62;UBERON:0003082,7.34e-10,62;UBERON:0002385,1.60e-09,64;UBERON:0001015,1.60e-09,64;UBERON:0000383,1.60e-09,64;UBERON:0002118,2.68e-09,5;UBERON:0004872,4.86e-09,83;UBERON:0002329,1.71e-08,71;UBERON:0003059,1.71e-08,71;UBERON:0007282,1.71e-08,71;UBERON:0004290,1.71e-08,71;UBERON:0009618,1.71e-08,71;UBERON:0003077,2.32e-08,72;UBERON:0007285,2.32e-08,72;UBERON:0007524,3.11e-08,73;UBERON:0000947,3.45e-08,21;UBERON:0010191,3.45e-08,21;UBERON:0004535,3.57e-08,109;UBERON:0001009,6.45e-08,112;UBERON:0007503,1.20e-07,78;UBERON:0000486,3.96e-07,83;UBERON:0000490,5.60e-07,148;UBERON:0001135,7.81e-07,15 | |||
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| ||
|short_description=p6@MPP4 | |||
}} | }} |
Latest revision as of 13:56, 19 September 2015
Short description: | p6@MPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MPP4_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000315506, ENST00000315549, ENST00000359962, ENST00000374605, ENST00000409474, NM_033066, uc002uyk.3, uc002uyl.3, uc002uym.1, uc002uyn.2, uc010ftk.2_5end |
EntrezGene: | MPP4 |
HGNC: | 13680 |
UniProt: | F8WC25F8WDZ0C9K002Q96JB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.69e-15 | 32 |
smooth muscle cell of the pulmonary artery | 8.64e-12 | 1 |
smooth muscle cell | 3.21e-11 | 43 |
smooth muscle myoblast | 3.21e-11 | 43 |
muscle precursor cell | 1.32e-10 | 58 |
myoblast | 1.32e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.32e-10 | 58 |
aortic smooth muscle cell | 5.28e-10 | 10 |
mesodermal cell | 7.63e-09 | 121 |
muscle cell | 1.26e-08 | 55 |
electrically responsive cell | 1.04e-07 | 61 |
electrically active cell | 1.04e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.26e-07 | 14 |