Personal tools

FFCP PHASE1:Mm9::chr7:111393010..111393066,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=94094
|EntrezGene=94094
|HGNC=
|HGNC=
|MCL_coexpression_id=18
|MCL_coexpression_id=18
|TSSclassifier=NA
|UniProt=Q99PP6
|UniProt=Q99PP6
|association_with_transcript=-2bp_to_ENSMUST00000106854_5end
|association_with_transcript=-2bp_to_ENSMUST00000106854_5end
|cluster_id=chr7:111393010..111393066,+
|description=CAGE_peak_1_at_Trim34a_5end
|description=CAGE_peak_1_at_Trim34a_5end
|id=chr7:111393010..111393066,+
|id=chr7:111393010..111393066,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.47e-11!193;UBERON:0004120!1.47e-11!193;UBERON:0006603!1.47e-11!193;UBERON:0004119!9.19e-10!130;UBERON:0000925!9.19e-10!130;UBERON:0006595!9.19e-10!130;UBERON:0001007!3.85e-09!128;UBERON:0001555!3.85e-09!128;UBERON:0007026!3.85e-09!128;UBERON:0004921!4.38e-09!126;UBERON:0004185!4.38e-09!126;UBERON:0003104!3.62e-08!131;UBERON:0009142!3.62e-08!131;UBERON:0002405!5.83e-07!70
|ontology_enrichment_uberon=UBERON:0000926!1.47e-11!193;UBERON:0004120!1.47e-11!193;UBERON:0006603!1.47e-11!193;UBERON:0004119!9.19e-10!130;UBERON:0000925!9.19e-10!130;UBERON:0006595!9.19e-10!130;UBERON:0001007!3.85e-09!128;UBERON:0001555!3.85e-09!128;UBERON:0007026!3.85e-09!128;UBERON:0004921!4.38e-09!126;UBERON:0004185!4.38e-09!126;UBERON:0003104!3.62e-08!131;UBERON:0009142!3.62e-08!131;UBERON:0002405!5.83e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.10e-09,118;UBERON:0000925,1.10e-09,118;UBERON:0006595,1.10e-09,118;UBERON:0001007,4.66e-09,116;UBERON:0001555,4.66e-09,116;UBERON:0007026,4.66e-09,116;UBERON:0004921,5.17e-09,114;UBERON:0000926,1.25e-07,120;UBERON:0004120,1.25e-07,120;UBERON:0006603,1.25e-07,120
|phase1_expression=0.960893082628764,6.97950815278722,5.91499011206397,8.77146212789807,5.00895729946347,3.02182689441402,4.43864017131499,14.4618122254565,1.68946466582,1.17032263160997,1.19852577757853,0.398860794976682,36.8081569352092,10.9275503023747,20.3196954707554,31.9910922475925,8.39474253753776,96.846884764979,98.173934461709,69.1755132430789,5.6128571499706,7.4468213400664,6.52999472847338,3.35984087866154,2.52350209173887,7.46501553349526,6.46142994238612,6.24866574789078,5.70070258369122,7.05684363327806,1.77384408524244,0,0.61506478758457,0,2.3108129580102,2.49351968037739,1.63335485009895,12.1374172913703,15.626706890476,15.7057123192139,11.7646297606203,13.6609096991689,15.0508209439658,3.02152363141385,3.04130793658544,1.28482726513177,1.56478268869608,0.218025156380447,0.439372365468944,1.36100929351998,1.67983705950435,0,46.8113470901084,13.7818806982155,9.41062637598899,2.82985379639542,2.57880095944881,7.21940929188419,0.202316460859598,0.528990979272033,0,1.35537812827653,1.77858959222228,1.7997994345628,0.988866362566974,1.4209602298922,0.898800331555214,0,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0,0.122490799214954,0,0,0,0.383062014255563,1.0752457327937,0,0.182975287204819,0.52091337055676,0.837548997004143,1.12552522006336,0.763991238884051,0,0.711858403995515,0,3.63485727999283,3.02286240427142,22.8992946074325,9.46466264679525,0,1.61910957491345,5.84798775702902,3.58421509677868,2.94933282276679,1.02258193546835,0.259786004602869,0.35333957451034,1.83096445709685,2.56652954828636,2.54805239706646,0,0.865964164044856,1.52015919285059,1.01104889002957,5.1382745873577,124.54912203429,6.82833839698194,0.867426633830679,1.82679286987285,1.84492397804847,8.74191315205211,7.64326596382081,5.6549966098354,14.5845030963281,19.5209131841881,8.84610551949874,1.45590164952668,6.8460870722722,6.30337829075789,0,0.585561594023094,1.8850203613211,10.7291963187608,3.59445373517761,2.99951365496704,3.81210681219194,2.09706895166752,1.83000241127451,0.251308704225729,1.04294592115366,1.02286182932132,2.0778804455956,0.648965052271031,3.66621709861139,5.97153458928446,6.57079171927554,5.89237196482127,0.390361328888111,0.919608417733892,0.540186389416048,1.65775299619287,1.42876648217788,0.640568601424249,0.843315521037559,3.3631438196072,0.215567992932842,0.756424320671277,1.40760899331159,0.876782929710299,0.834141747676794,0.696504333044333,3.2925141825271,1.59227413454795,0.702213187313235,1.54408744268829,2.27330799516474,0.621377317606506,1.64168241986767,1.62055855314913,2.60419209143731,1.96764231747404,2.1597395804233,2.09280550275367,5.633741429392,4.67061369468678,2.46839774870221,4.59668899421467,5.99909190639332,8.18719929581861,11.8557062257167,7.64976586934119,1.05144974282064,0.720332286654991,24.4509899408011,12.164726066523,0.853153002140936,0.928946687441754,0.902072229254653,1.21010114774006,1.77902435075896,6.46767128782701,7.59246498471219,5.27036655116835,11.5614196048124,12.1363447945102,12.8676297498619,17.0775687644302,11.8875927431082,6.17337947088538,0.379335801906163,0.913988100877831,3.38123207019241,1.62921062276251,3.29719228184964,2.73529697572242,4.48979413582227,5.46157547524528,6.43694784149637,4.68909222902842,8.30067355844017,1.50160595144485,2.55526693647164,1.57403478669398,1.42002084971952,0.964708639009667,1.78238096246994,12.6586300478357,9.89024883327716,4.11842119782122,8.62609239164127,10.0478055870496,4.68056509671841,6.56705082662491,7.17589654087649,4.3419916922703,26.0501998134913,0.757965647081939,0.814824882210129,0.678980343100753,0.469380496577004,4.18765643604539,9.52174563544055,7.02481132288076,6.77831119656621,8.41565820665345,8.77001227616179,17.533374674584,20.7221978239075,15.1881511510587,30.1582567878545,23.3879444042045,6.88469982226651,10.7615331058846,2.88991061978026,1.40654023910644,0.163934945376675,2.52470927204373,0,0.390438744296638,0.215423397732799,0,0.668396022247182,1.13230612315533,1.21443210502468,1.16902343164525,1.18586333383957,2.24924921495265,7.80670468645477,2.31485284767432,2.44330439030364,9.73323725537959,1.32745138339963,1.69946445308487,1.209294227859,1.13163047853539,0.590603785761546,5.22639751504677,8.78656196771952,2.18120237686503,4.27796854061666,2.84433082142234,3.16255825724996,9.28219889233682,6.80879211507576,0.900305470156551,1.03486947026204,0.428674070063185,1.95074257006501,1.60531935841864,0.658196082408484,4.56697423671899,6.57080782578389,15.0400770313312,4.6310963591542,3.95727007059552,3.22928853391811,1.99032652262914,1.19372344003136,1.31312719796049,11.0762717919343,2.22510362412612,28.8771788548371,1.857481811669,17.4082855727529,8.85331747922048,26.5186801778789,31.3426097292936,6.28920190977265,5.59805809294632,6.21899882119907,2.86401185404534,0.632671987162271,1.82987520414164,0.86404272657441,1.25452977608681,3.49380101993884,2.69728692769641,4.29797969771747,2.87931536182433,6.61036363788144,9.32008969630389,1.69107881605257,1.79419855252775,0.827292452285488,1.16670713006429,1.80823752868824,4.05494701177868,5.16371850041317,2.8644964665669,2.9360616439199,2.65742532908607,1.44015003128933,8.84831137758899,1.62180172232131,3.80030541509861,7.7952493786677,4.65469408735452,6.75516606256301,8.77426781495773,6.20296014133224,7.77441664600737,6.55378537232999,8.4693995514946,11.6949456887703,11.3529973135589,9.11639837016238,4.30787728868902,2.66383144048878,0.62799699626633,1.51096154727671,6.95482538515886,11.6363134779733,17.2162526811229,4.71610433973945,6.52043735245972,0.564751842617067,0,0,0.515559547031063,0,0,0.675022500231806,0,0.453142408984205,1.03552062350364,0.518936737920883,0.399024873401031,0.682934423016537,0.729320151204882,1.25767897576789,0.919217542250071,2.889207461421,3.09052585858341,1.28367683836726,3.03236654116557,2.02783439912192,1.88626341386076,2.24739617927718,2.24088033417042,2.01024141344646,5.23923060411381,1.73826488917283,1.73618298417335,2.06042950401653,1.32479028120958,1.71434626192708,1.59728225543404,1.1921809497366,1.74415699958794,2.82328141245992,2.28459441307527,2.56099162021882,2.10455769150274,2.8518863907631,1.68342681497322,1.18635018124174,2.75812550651578,0.409231043169689,1.85924209423159,1.54325288784913,0.749431733813838,3.74290573512653,3.86767897286937,2.48674831689496,2.20591419119516,3.47801753430632
|phase1_expression=0.960893082628764,6.97950815278722,5.91499011206397,8.77146212789807,5.00895729946347,3.02182689441402,4.43864017131499,14.4618122254565,1.68946466582,1.17032263160997,1.19852577757853,0.398860794976682,36.8081569352092,10.9275503023747,20.3196954707554,31.9910922475925,8.39474253753776,96.846884764979,98.173934461709,69.1755132430789,5.6128571499706,7.4468213400664,6.52999472847338,3.35984087866154,2.52350209173887,7.46501553349526,6.46142994238612,6.24866574789078,5.70070258369122,7.05684363327806,1.77384408524244,0,0.61506478758457,0,2.3108129580102,2.49351968037739,1.63335485009895,12.1374172913703,15.626706890476,15.7057123192139,11.7646297606203,13.6609096991689,15.0508209439658,3.02152363141385,3.04130793658544,1.28482726513177,1.56478268869608,0.218025156380447,0.439372365468944,1.36100929351998,1.67983705950435,0,46.8113470901084,13.7818806982155,9.41062637598899,2.82985379639542,2.57880095944881,7.21940929188419,0.202316460859598,0.528990979272033,0,1.35537812827653,1.77858959222228,1.7997994345628,0.988866362566974,1.4209602298922,0.898800331555214,0,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0,0.122490799214954,0,0,0,0.383062014255563,1.0752457327937,0,0.182975287204819,0.52091337055676,0.837548997004143,1.12552522006336,0.763991238884051,0,0.711858403995515,0,3.63485727999283,3.02286240427142,22.8992946074325,9.46466264679525,0,1.61910957491345,5.84798775702902,3.58421509677868,2.94933282276679,1.02258193546835,0.259786004602869,0.35333957451034,1.83096445709685,2.56652954828636,2.54805239706646,0,0.865964164044856,1.52015919285059,1.01104889002957,5.1382745873577,124.54912203429,6.82833839698194,0.867426633830679,1.82679286987285,1.84492397804847,8.74191315205211,7.64326596382081,5.6549966098354,14.5845030963281,19.5209131841881,8.84610551949874,1.45590164952668,6.8460870722722,6.30337829075789,0,0.585561594023094,1.8850203613211,10.7291963187608,3.59445373517761,2.99951365496704,3.81210681219194,2.09706895166752,1.83000241127451,0.251308704225729,1.04294592115366,1.02286182932132,2.0778804455956,0.648965052271031,3.66621709861139,5.97153458928446,6.57079171927554,5.89237196482127,0.390361328888111,0.919608417733892,0.540186389416048,1.65775299619287,1.42876648217788,0.640568601424249,0.843315521037559,3.3631438196072,0.215567992932842,0.756424320671277,1.40760899331159,0.876782929710299,0.834141747676794,0.696504333044333,3.2925141825271,1.59227413454795,0.702213187313235,1.54408744268829,2.27330799516474,0.621377317606506,1.64168241986767,1.62055855314913,2.60419209143731,1.96764231747404,2.1597395804233,2.09280550275367,5.633741429392,4.67061369468678,2.46839774870221,4.59668899421467,5.99909190639332,8.18719929581861,11.8557062257167,7.64976586934119,1.05144974282064,0.720332286654991,24.4509899408011,12.164726066523,0.853153002140936,0.928946687441754,0.902072229254653,1.21010114774006,1.77902435075896,6.46767128782701,7.59246498471219,5.27036655116835,11.5614196048124,12.1363447945102,12.8676297498619,17.0775687644302,11.8875927431082,6.17337947088538,0.379335801906163,0.913988100877831,3.38123207019241,1.62921062276251,3.29719228184964,2.73529697572242,4.48979413582227,5.46157547524528,6.43694784149637,4.68909222902842,8.30067355844017,1.50160595144485,2.55526693647164,1.57403478669398,1.42002084971952,0.964708639009667,1.78238096246994,12.6586300478357,9.89024883327716,4.11842119782122,8.62609239164127,10.0478055870496,4.68056509671841,6.56705082662491,7.17589654087649,4.3419916922703,26.0501998134913,0.757965647081939,0.814824882210129,0.678980343100753,0.469380496577004,4.18765643604539,9.52174563544055,7.02481132288076,6.77831119656621,8.41565820665345,8.77001227616179,17.533374674584,20.7221978239075,15.1881511510587,30.1582567878545,23.3879444042045,6.88469982226651,10.7615331058846,2.88991061978026,1.40654023910644,0.163934945376675,2.52470927204373,0,0.390438744296638,0.215423397732799,0,0.668396022247182,1.13230612315533,1.21443210502468,1.16902343164525,1.18586333383957,2.24924921495265,7.80670468645477,2.31485284767432,2.44330439030364,9.73323725537959,1.32745138339963,1.69946445308487,1.209294227859,1.13163047853539,0.590603785761546,5.22639751504677,8.78656196771952,2.18120237686503,4.27796854061666,2.84433082142234,3.16255825724996,9.28219889233682,6.80879211507576,0.900305470156551,1.03486947026204,0.428674070063185,1.95074257006501,1.60531935841864,0.658196082408484,4.56697423671899,6.57080782578389,15.0400770313312,4.6310963591542,3.95727007059552,3.22928853391811,1.99032652262914,1.19372344003136,1.31312719796049,11.0762717919343,2.22510362412612,28.8771788548371,1.857481811669,17.4082855727529,8.85331747922048,26.5186801778789,31.3426097292936,6.28920190977265,5.59805809294632,6.21899882119907,2.86401185404534,0.632671987162271,1.82987520414164,0.86404272657441,1.25452977608681,3.49380101993884,2.69728692769641,4.29797969771747,2.87931536182433,6.61036363788144,9.32008969630389,1.69107881605257,1.79419855252775,0.827292452285488,1.16670713006429,1.80823752868824,4.05494701177868,5.16371850041317,2.8644964665669,2.9360616439199,2.65742532908607,1.44015003128933,8.84831137758899,1.62180172232131,3.80030541509861,7.7952493786677,4.65469408735452,6.75516606256301,8.77426781495773,6.20296014133224,7.77441664600737,6.55378537232999,8.4693995514946,11.6949456887703,11.3529973135589,9.11639837016238,4.30787728868902,2.66383144048878,0.62799699626633,1.51096154727671,6.95482538515886,11.6363134779733,17.2162526811229,4.71610433973945,6.52043735245972,0.564751842617067,0,0,0.515559547031063,0,0,0.675022500231806,0,0.453142408984205,1.03552062350364,0.518936737920883,0.399024873401031,0.682934423016537,0.729320151204882,1.25767897576789,0.919217542250071,2.889207461421,3.09052585858341,1.28367683836726,3.03236654116557,2.02783439912192,1.88626341386076,2.24739617927718,2.24088033417042,2.01024141344646,5.23923060411381,1.73826488917283,1.73618298417335,2.06042950401653,1.32479028120958,1.71434626192708,1.59728225543404,1.1921809497366,1.74415699958794,2.82328141245992,2.28459441307527,2.56099162021882,2.10455769150274,2.8518863907631,1.68342681497322,1.18635018124174,2.75812550651578,0.409231043169689,1.85924209423159,1.54325288784913,0.749431733813838,3.74290573512653,3.86767897286937,2.48674831689496,2.20591419119516,3.47801753430632
|short_description=p1@Trim34a
|short_description=p1@Trim34a
}}
}}

Latest revision as of 16:12, 25 September 2015

Short description:p1@Trim34a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim34a_5end
Coexpression cluster:MCL_coexpression_mm9:18
Association with transcript: -2bp_to_ENSMUST00000106854_5end
EntrezGene:Trim34a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim34a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.77
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E436.81
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A331.99
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A296.85
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A498.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A669.18
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I26.25
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A246.81
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.14
accessory axillary lymph node, adult.CNhs10475.1063-29H9124.55
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C17.64
adrenal gland, neonate N25.CNhs11223.1377-27I35.65
amnion, adult pregnant day17.5.CNhs10488.583-22A814.58
aorta, adult.CNhs10498.46-23H119.52
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H710.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.97
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G14.60
heart, neonate N16.CNhs11209.782-15G16.00
heart, neonate N20.CNhs11127.821-26I68.19
heart, neonate N25.CNhs11196.1351-25D311.86
heart, neonate N30.CNhs11202.1390-42D27.65
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I324.45
intestine, adult.CNhs10496.178-9A312.16
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F76.47
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B811.56
intestine, neonate N07.CNhs11095.720-20F212.14
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E311.89
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D54.49
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F36.44
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F49.89
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B126.05
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I69.52
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E68.77
lung, neonate N20.CNhs11109.822-18A417.53
lung, neonate N25.CNhs11119.1359-25C720.72
lung, neonate N30.CNhs11133.1394-42H215.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.39
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H210.76
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G69.73
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G315.04
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G228.88
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F217.41
spleen, neonate N10.CNhs11116.752-24D18.85
spleen, neonate N20.CNhs11112.824-19H126.52
spleen, neonate N25.CNhs11099.1354-25G331.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.22
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A94.30
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I16.61
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B75.16
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C57.80
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F88.77
thymus, neonate N03.CNhs11137.2104-43C76.20
thymus, neonate N06.CNhs11197.681-26C47.77
thymus, neonate N07.CNhs11211.713-19D36.55
thymus, neonate N10.CNhs11194.748-24E48.47
thymus, neonate N20.CNhs11186.820-7A211.69
thymus, neonate N25.CNhs11125.1362-25G711.35
thymus, neonate N30.CNhs11132.1393-42G29.12
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F511.64
uterus, adult.CNhs10509.92-27E517.22
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.10e-09118
endoderm1.10e-09118
presumptive endoderm1.10e-09118
digestive system4.66e-09116
digestive tract4.66e-09116
primitive gut4.66e-09116
subdivision of digestive tract5.17e-09114
mesoderm1.25e-07120
mesoderm-derived structure1.25e-07120
presumptive mesoderm1.25e-07120
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:111393010..111393066,%2B&oldid=4201288"