FFCP PHASE1:Mm9::chr12:40925904..40925918,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380755 | |EntrezGene=380755 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |MCL_coexpression_id=19 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UQS2,B2RVW5 | |UniProt=Q3UQS2,B2RVW5 | ||
|association_with_transcript=-2bp_to_ENSMUST00000095760,ENSMUST00000101468,NM_001033437,uc007nkx.1,uc011ylo.1,uc011ylp.1_5end | |association_with_transcript=-2bp_to_ENSMUST00000095760,ENSMUST00000101468,NM_001033437,uc007nkx.1,uc011ylo.1,uc011ylp.1_5end | ||
|cluster_id=chr12:40925904..40925918,- | |||
|description=CAGE_peak_3_at_Gm889_5end | |description=CAGE_peak_3_at_Gm889_5end | ||
|id=chr12:40925904..40925918,- | |id=chr12:40925904..40925918,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.11e-17!18;UBERON:0000948!4.11e-17!18;UBERON:0005498!4.11e-17!18;UBERON:0004140!4.11e-17!18;UBERON:0009881!4.11e-17!18;UBERON:0004141!4.11e-17!18;UBERON:0003084!4.11e-17!18;UBERON:0007005!4.11e-17!18;UBERON:0004139!4.11e-17!18;UBERON:0004291!4.11e-17!18;UBERON:0004535!2.27e-13!23;UBERON:0001009!2.27e-13!23;UBERON:0004872!2.14e-08!33;UBERON:0003081!5.61e-08!88 | |ontology_enrichment_uberon=UBERON:0007100!4.11e-17!18;UBERON:0000948!4.11e-17!18;UBERON:0005498!4.11e-17!18;UBERON:0004140!4.11e-17!18;UBERON:0009881!4.11e-17!18;UBERON:0004141!4.11e-17!18;UBERON:0003084!4.11e-17!18;UBERON:0007005!4.11e-17!18;UBERON:0004139!4.11e-17!18;UBERON:0004291!4.11e-17!18;UBERON:0004535!2.27e-13!23;UBERON:0001009!2.27e-13!23;UBERON:0004872!2.14e-08!33;UBERON:0003081!5.61e-08!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.19e-43,18;UBERON:0000948,1.19e-43,18;UBERON:0005498,1.19e-43,18;UBERON:0004140,1.19e-43,18;UBERON:0009881,1.19e-43,18;UBERON:0004141,1.19e-43,18;UBERON:0003084,1.19e-43,18;UBERON:0007005,1.19e-43,18;UBERON:0004139,1.19e-43,18;UBERON:0004291,1.19e-43,18;UBERON:0004535,1.19e-33,23;UBERON:0001009,1.19e-33,23;UBERON:0004872,1.01e-22,33;UBERON:0003103,1.50e-19,43;UBERON:0003914,3.21e-15,47;UBERON:0003081,6.50e-11,87;UBERON:0010314,1.06e-07,92;UBERON:0000926,4.48e-07,120;UBERON:0004120,4.48e-07,120;UBERON:0006603,4.48e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,1.45590164952668,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.631325567659422,0,0,0,0.30140963567143,0,0.2562274405697,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0.834141747676794,1.0447564995665,0.205782136407943,0,0,0,0,2.69263504296152,0.938104239924385,2.88099298337624,3.07768156260773,4.72234156193769,4.47374627373397,4.18561100550734,2.95100741539581,3.73649095574942,2.30383789878873,3.94001913789829,3.56702762001765,5.99419948443863,6.36695334344047,4.2946054003319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.301564624640779,0.358117032009409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.302899349844443,0.304827226619999,0.504130925684203,0.487289403698762,0.384847366561318,0.584384510907845,3.62768613784338,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0,0.505394423527595,0.25347929989024,0.754505365544305,1.21733959710847,0.384150914429216,0.516919220600519,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0,0.436039249896986,0.564656282491984,0.338458431566706,0.914639864363863,0.789209134313529,0.814824683075171,1.12228454331548,0.711810108745045,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0,0.233931608445408,0.644613162144895,0.765153328275374,1.10295709559758,1.39120701372253 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,1.45590164952668,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.631325567659422,0,0,0,0.30140963567143,0,0.2562274405697,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0.834141747676794,1.0447564995665,0.205782136407943,0,0,0,0,2.69263504296152,0.938104239924385,2.88099298337624,3.07768156260773,4.72234156193769,4.47374627373397,4.18561100550734,2.95100741539581,3.73649095574942,2.30383789878873,3.94001913789829,3.56702762001765,5.99419948443863,6.36695334344047,4.2946054003319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.301564624640779,0.358117032009409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.302899349844443,0.304827226619999,0.504130925684203,0.487289403698762,0.384847366561318,0.584384510907845,3.62768613784338,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0,0.505394423527595,0.25347929989024,0.754505365544305,1.21733959710847,0.384150914429216,0.516919220600519,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0,0.436039249896986,0.564656282491984,0.338458431566706,0.914639864363863,0.789209134313529,0.814824683075171,1.12228454331548,0.711810108745045,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0,0.233931608445408,0.644613162144895,0.765153328275374,1.10295709559758,1.39120701372253 | ||
|short_description=p3@Gm889 | |short_description=p3@Gm889 | ||
}} | }} |
Latest revision as of 14:48, 26 September 2015
Short description: | p3@Gm889 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm889_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -2bp_to_ENSMUST00000095760, ENSMUST00000101468, NM_001033437, uc007nkx.1, uc011ylo.1, uc011ylp.1_5end |
EntrezGene: | Gm889 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.19e-43 | 18 |
heart | 1.19e-43 | 18 |
primitive heart tube | 1.19e-43 | 18 |
primary heart field | 1.19e-43 | 18 |
anterior lateral plate mesoderm | 1.19e-43 | 18 |
heart tube | 1.19e-43 | 18 |
heart primordium | 1.19e-43 | 18 |
cardiac mesoderm | 1.19e-43 | 18 |
cardiogenic plate | 1.19e-43 | 18 |
heart rudiment | 1.19e-43 | 18 |
cardiovascular system | 1.19e-33 | 23 |
circulatory system | 1.19e-33 | 23 |
splanchnic layer of lateral plate mesoderm | 1.01e-22 | 33 |
compound organ | 1.50e-19 | 43 |
epithelial tube | 3.21e-15 | 47 |
lateral plate mesoderm | 6.50e-11 | 87 |
structure with developmental contribution from neural crest | 1.06e-07 | 92 |
mesoderm | 4.48e-07 | 120 |
mesoderm-derived structure | 4.48e-07 | 120 |
presumptive mesoderm | 4.48e-07 | 120 |