FFCP PHASE1:Mm9::chr3:55046575..55046586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13175 | |EntrezGene=13175 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BRN4 | |UniProt=Q8BRN4 | ||
|association_with_transcript=47bp_to_ENSMUST00000107963_5end | |association_with_transcript=47bp_to_ENSMUST00000107963_5end | ||
|cluster_id=chr3:55046575..55046586,+ | |||
|description=CAGE_peak_6_at_Dclk1_5end | |description=CAGE_peak_6_at_Dclk1_5end | ||
|id=chr3:55046575..55046586,+ | |id=chr3:55046575..55046586,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.73e-18!33;CL:0000047!2.73e-18!33;CL:0000031!2.73e-18!33;CL:0000404!2.73e-18!33;CL:0000393!2.82e-18!39;CL:0000211!2.82e-18!39;CL:0000221!1.74e-15!44;CL:0000133!1.74e-15!44;CL:0002319!2.73e-15!43;CL:0000055!5.48e-15!50;CL:0000117!8.44e-15!23;CL:0000337!8.44e-15!23;CL:0002321!8.39e-08!70;CL:0000220!8.39e-08!70 | |ontology_enrichment_celltype=CL:0000540!2.73e-18!33;CL:0000047!2.73e-18!33;CL:0000031!2.73e-18!33;CL:0000404!2.73e-18!33;CL:0000393!2.82e-18!39;CL:0000211!2.82e-18!39;CL:0000221!1.74e-15!44;CL:0000133!1.74e-15!44;CL:0002319!2.73e-15!43;CL:0000055!5.48e-15!50;CL:0000117!8.44e-15!23;CL:0000337!8.44e-15!23;CL:0002321!8.39e-08!70;CL:0000220!8.39e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.98e-25,39;CL:0000211,1.98e-25,39;CL:0000540,5.09e-25,33;CL:0000047,5.09e-25,33;CL:0000031,5.09e-25,33;CL:0000404,5.09e-25,33;CL:0000221,2.98e-20,44;CL:0000133,2.98e-20,44;CL:0000117,4.07e-20,23;CL:0000337,4.07e-20,23;CL:0002319,5.61e-20,43;CL:0002321,7.60e-12,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.39e-33!75;UBERON:0001016!2.39e-33!75;UBERON:0001017!3.51e-32!73;UBERON:0005743!3.51e-32!73;UBERON:0004121!9.45e-28!102;UBERON:0000924!9.45e-28!102;UBERON:0006601!9.45e-28!102;UBERON:0001049!9.76e-24!52;UBERON:0005068!9.76e-24!52;UBERON:0006241!9.76e-24!52;UBERON:0007135!9.76e-24!52;UBERON:0002346!1.97e-23!71;UBERON:0003075!1.97e-23!71;UBERON:0007284!1.97e-23!71;UBERON:0000955!3.49e-23!50;UBERON:0006238!3.49e-23!50;UBERON:0000033!8.22e-23!63;UBERON:0002616!1.91e-22!49;UBERON:0003056!9.04e-21!49;UBERON:0003080!2.31e-20!40;UBERON:0002780!9.96e-20!39;UBERON:0001890!9.96e-20!39;UBERON:0006240!9.96e-20!39;UBERON:0002020!5.56e-19!34;UBERON:0002791!2.46e-16!29;UBERON:0003528!2.46e-16!29;UBERON:0001893!2.46e-16!29;UBERON:0000956!2.31e-11!21;UBERON:0001869!2.31e-11!21;UBERON:0000203!2.31e-11!21;UBERON:0000153!3.77e-11!94;UBERON:0007811!7.61e-11!86;UBERON:0002619!2.30e-09!17;UBERON:0002021!3.36e-08!10;UBERON:0000411!3.36e-08!10;UBERON:0001950!3.36e-08!10 | |ontology_enrichment_uberon=UBERON:0000073!2.39e-33!75;UBERON:0001016!2.39e-33!75;UBERON:0001017!3.51e-32!73;UBERON:0005743!3.51e-32!73;UBERON:0004121!9.45e-28!102;UBERON:0000924!9.45e-28!102;UBERON:0006601!9.45e-28!102;UBERON:0001049!9.76e-24!52;UBERON:0005068!9.76e-24!52;UBERON:0006241!9.76e-24!52;UBERON:0007135!9.76e-24!52;UBERON:0002346!1.97e-23!71;UBERON:0003075!1.97e-23!71;UBERON:0007284!1.97e-23!71;UBERON:0000955!3.49e-23!50;UBERON:0006238!3.49e-23!50;UBERON:0000033!8.22e-23!63;UBERON:0002616!1.91e-22!49;UBERON:0003056!9.04e-21!49;UBERON:0003080!2.31e-20!40;UBERON:0002780!9.96e-20!39;UBERON:0001890!9.96e-20!39;UBERON:0006240!9.96e-20!39;UBERON:0002020!5.56e-19!34;UBERON:0002791!2.46e-16!29;UBERON:0003528!2.46e-16!29;UBERON:0001893!2.46e-16!29;UBERON:0000956!2.31e-11!21;UBERON:0001869!2.31e-11!21;UBERON:0000203!2.31e-11!21;UBERON:0000153!3.77e-11!94;UBERON:0007811!7.61e-11!86;UBERON:0002619!2.30e-09!17;UBERON:0002021!3.36e-08!10;UBERON:0000411!3.36e-08!10;UBERON:0001950!3.36e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.84e-40,75;UBERON:0001017,1.86e-38,73;UBERON:0004121,1.10e-31,95;UBERON:0000924,1.10e-31,95;UBERON:0006601,1.10e-31,95;UBERON:0000073,1.91e-29,54;UBERON:0001049,2.41e-27,52;UBERON:0005068,2.41e-27,52;UBERON:0006241,2.41e-27,52;UBERON:0007135,2.41e-27,52;UBERON:0002346,1.54e-26,64;UBERON:0003075,1.54e-26,64;UBERON:0007284,1.54e-26,64;UBERON:0002020,5.56e-26,34;UBERON:0003080,8.12e-25,40;UBERON:0002780,6.04e-24,39;UBERON:0001890,6.04e-24,39;UBERON:0006240,6.04e-24,39;UBERON:0000955,8.01e-24,47;UBERON:0006238,8.01e-24,47;UBERON:0010371,4.25e-23,73;UBERON:0002616,7.28e-23,46;UBERON:0003528,2.89e-22,29;UBERON:0002791,2.89e-22,29;UBERON:0001893,2.89e-22,29;UBERON:0003056,5.38e-22,49;UBERON:0010314,6.78e-16,92;UBERON:0000956,2.75e-15,21;UBERON:0001869,2.75e-15,21;UBERON:0000203,2.75e-15,21;UBERON:0002619,1.73e-12,17;UBERON:0002021,7.21e-11,10;UBERON:0000411,7.21e-11,10;UBERON:0001950,7.21e-11,10;UBERON:0002420,3.66e-08,8;UBERON:0007245,3.66e-08,8;UBERON:0010009,3.66e-08,8;UBERON:0010011,3.66e-08,8;UBERON:0000454,3.66e-08,8;UBERON:0000025,5.81e-07,114;UBERON:0000010,9.15e-07,11 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.11514624341466,2.0190142737785,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,1.02903774414379,1.43266719969378,0,11.7343547298567,13.2247744818008,14.5781222806421,0,0,0,0.988866362566974,0,0.299600110518405,1.15265491596466,3.94020526772215,3.78016627328734,2.3135745748652,2.28520787523043,1.76694832761291,6.00204916153275,5.94241920313065,2.75765635983006,11.0115880999389,4.85211884723713,5.06901559745603,12.7929699098288,12.6252948171325,6.25096044668112,4.74611098302348,3.93933827022176,4.88954392885792,6.77645746589436,4.55589378557129,6.71038004971082,2.80186915332781,2.87171928405785,0.289864488701678,0,0,0,0,0,0.140444420131752,0.852151612890289,0.259786004602869,1.7666978725517,1.26759077799012,1.28326477414318,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0.173485326766136,0.913396434936424,0.230615497256059,0.452167921657868,0.587943535678524,0,0,0.289198713839823,0,0.485300549842228,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,5.09288173976397,3.66000482254901,5.15182843662744,5.38855392596057,2.55715457330331,4.36354893575076,3.89379031362618,0.712875546952214,0,0,0.210441855886474,0.520481771850815,0.919608417733892,1.98068342785884,1.50704817835715,1.29269348387523,1.2811372028485,0.655912071918102,0.258703370739016,0,0.567318240503458,1.05570674498369,0.876782929710299,0.556094498451196,1.74126083261083,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0,0.473489471170421,0.196764231747404,0,0,0,0.233530684734339,0.493679549740441,0,0,0,0,0,5.88811855979556,6.48299057989492,0.330418782983798,0,0.213288250535234,1.39342003116263,0.38660238396628,0.605050573870028,0.889512175379481,0,0,0.494096864172033,0.251335208800269,0,0,0,0,0,0.569003702859245,0.571242563048644,0,0.610953983535943,0.775809948670503,0.701358198903186,0.632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,5.29816946959713,3.6335622843583,0.163934945376675,0,1.26203287766503,1.56175497718655,3.23135096599198,1.91175038362042,2.45078541490634,3.67999490025482,1.61924280669958,1.75353514746787,3.16230222357219,7.39039027770156,0,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,5.10659408630682,2.34079422240703,0.517434735131018,0.857348140126369,2.48276327099183,2.31879462882692,2.46823530903181,0.913394847343798,0,0.21183207086382,0,0.65954501176592,0.161464426695906,0.361877549568935,0.238744688006273,0,0,2.78137953015765,0.512612642393558,0,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.448549638131936,0,0,0.258319646955462,0,0.234714477291508,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,11.2950368523413,10.1271552031579,10.3121192419091,7.56154002312225,9.59115527678899,8.3093328712867,6.07520250208625,4.95353323546643,5.89085131679466,8.28416498802912,1.45302286617847,4.38927360741134,2.04880326904961,1.21553358534147,1.25767897576789,1.2869045591501,2.22246727801615,1.64828045791115,1.28367683836726,3.03236654116557,2.28131369901216,2.64076877940507,0.749132059759059,1.85672941974121,1.37845125493472,0.952587382566147,2.20180219295225,2.31491064556446,4.12085900803307,1.61918812147837,2.40008476669791,1.59728225543404,0.953744759789284,2.32554266611726,1.97629698872194,1.4384483341585,3.10977553883713,1.8414879800649,2.17286582153379,2.24456908663095,1.89816028998679,1.28055827088233,0,2.16911577660352,1.54325288784913,1.74867404556562,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,1.15933917810211 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|phase1_expression=2.88267924788629,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.11514624341466,2.0190142737785,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,1.02903774414379,1.43266719969378,0,11.7343547298567,13.2247744818008,14.5781222806421,0,0,0,0.988866362566974,0,0.299600110518405,1.15265491596466,3.94020526772215,3.78016627328734,2.3135745748652,2.28520787523043,1.76694832761291,6.00204916153275,5.94241920313065,2.75765635983006,11.0115880999389,4.85211884723713,5.06901559745603,12.7929699098288,12.6252948171325,6.25096044668112,4.74611098302348,3.93933827022176,4.88954392885792,6.77645746589436,4.55589378557129,6.71038004971082,2.80186915332781,2.87171928405785,0.289864488701678,0,0,0,0,0,0.140444420131752,0.852151612890289,0.259786004602869,1.7666978725517,1.26759077799012,1.28326477414318,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0.173485326766136,0.913396434936424,0.230615497256059,0.452167921657868,0.587943535678524,0,0,0.289198713839823,0,0.485300549842228,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,5.09288173976397,3.66000482254901,5.15182843662744,5.38855392596057,2.55715457330331,4.36354893575076,3.89379031362618,0.712875546952214,0,0,0.210441855886474,0.520481771850815,0.919608417733892,1.98068342785884,1.50704817835715,1.29269348387523,1.2811372028485,0.655912071918102,0.258703370739016,0,0.567318240503458,1.05570674498369,0.876782929710299,0.556094498451196,1.74126083261083,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0,0.473489471170421,0.196764231747404,0,0,0,0.233530684734339,0.493679549740441,0,0,0,0,0,5.88811855979556,6.48299057989492,0.330418782983798,0,0.213288250535234,1.39342003116263,0.38660238396628,0.605050573870028,0.889512175379481,0,0,0.494096864172033,0.251335208800269,0,0,0,0,0,0.569003702859245,0.571242563048644,0,0.610953983535943,0.775809948670503,0.701358198903186,0.632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,5.29816946959713,3.6335622843583,0.163934945376675,0,1.26203287766503,1.56175497718655,3.23135096599198,1.91175038362042,2.45078541490634,3.67999490025482,1.61924280669958,1.75353514746787,3.16230222357219,7.39039027770156,0,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,5.10659408630682,2.34079422240703,0.517434735131018,0.857348140126369,2.48276327099183,2.31879462882692,2.46823530903181,0.913394847343798,0,0.21183207086382,0,0.65954501176592,0.161464426695906,0.361877549568935,0.238744688006273,0,0,2.78137953015765,0.512612642393558,0,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.448549638131936,0,0,0.258319646955462,0,0.234714477291508,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,11.2950368523413,10.1271552031579,10.3121192419091,7.56154002312225,9.59115527678899,8.3093328712867,6.07520250208625,4.95353323546643,5.89085131679466,8.28416498802912,1.45302286617847,4.38927360741134,2.04880326904961,1.21553358534147,1.25767897576789,1.2869045591501,2.22246727801615,1.64828045791115,1.28367683836726,3.03236654116557,2.28131369901216,2.64076877940507,0.749132059759059,1.85672941974121,1.37845125493472,0.952587382566147,2.20180219295225,2.31491064556446,4.12085900803307,1.61918812147837,2.40008476669791,1.59728225543404,0.953744759789284,2.32554266611726,1.97629698872194,1.4384483341585,3.10977553883713,1.8414879800649,2.17286582153379,2.24456908663095,1.89816028998679,1.28055827088233,0,2.16911577660352,1.54325288784913,1.74867404556562,0.467863216890817,1.07435527024149,0.382576664137687,0.220591419119515,1.15933917810211 | ||
|short_description=p6@Dclk1 | |short_description=p6@Dclk1 | ||
}} | }} |
Latest revision as of 14:32, 25 September 2015
Short description: | p6@Dclk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dclk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 47bp_to_ENSMUST00000107963_5end |
EntrezGene: | Dclk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.98e-25 | 39 |
electrically active cell | 1.98e-25 | 39 |
neuron | 5.09e-25 | 33 |
neuronal stem cell | 5.09e-25 | 33 |
neuroblast | 5.09e-25 | 33 |
electrically signaling cell | 5.09e-25 | 33 |
ectodermal cell | 2.98e-20 | 44 |
neurectodermal cell | 2.98e-20 | 44 |
CNS neuron (sensu Vertebrata) | 4.07e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.07e-20 | 23 |
neural cell | 5.61e-20 | 43 |
embryonic cell | 7.60e-12 | 70 |