FFCP PHASE1:Mm9::chr2:104250760..104250782,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241589 | |EntrezGene=241589 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=D3YZ21,E9Q533 | |UniProt=D3YZ21,E9Q533 | ||
|association_with_transcript=-269bp_to_ENSMUST00000089726,ENSMUST00000165018,NM_001033347,uc008ljr.1_5end | |association_with_transcript=-269bp_to_ENSMUST00000089726,ENSMUST00000165018,NM_001033347,uc008ljr.1_5end | ||
|cluster_id=chr2:104250760..104250782,- | |||
|description=CAGE_peak_1_at_D430041D05Rik_5end | |description=CAGE_peak_1_at_D430041D05Rik_5end | ||
|id=chr2:104250760..104250782,- | |id=chr2:104250760..104250782,- | ||
|ontology_enrichment_celltype=CL:0000117!1.20e-13!23;CL:0000337!1.20e-13!23;CL:0000540!1.16e-10!33;CL:0000047!1.16e-10!33;CL:0000031!1.16e-10!33;CL:0000404!1.16e-10!33;CL:0000221!2.48e-07!44;CL:0000133!2.48e-07!44;CL:0002319!3.89e-07!43;CL:0000393!8.62e-07!39;CL:0000211!8.62e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.20e-13!23;CL:0000337!1.20e-13!23;CL:0000540!1.16e-10!33;CL:0000047!1.16e-10!33;CL:0000031!1.16e-10!33;CL:0000404!1.16e-10!33;CL:0000221!2.48e-07!44;CL:0000133!2.48e-07!44;CL:0002319!3.89e-07!43;CL:0000393!8.62e-07!39;CL:0000211!8.62e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.72e-16,23;CL:0000337,5.72e-16,23;CL:0000540,6.30e-11,33;CL:0000047,6.30e-11,33;CL:0000031,6.30e-11,33;CL:0000404,6.30e-11,33;CL:0000393,1.15e-07,39;CL:0000211,1.15e-07,39;CL:0000221,3.15e-07,44;CL:0000133,3.15e-07,44;CL:0002319,5.27e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.21e-23!71;UBERON:0003075!1.21e-23!71;UBERON:0007284!1.21e-23!71;UBERON:0001017!9.68e-22!73;UBERON:0005743!9.68e-22!73;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0004121!4.07e-21!102;UBERON:0000924!4.07e-21!102;UBERON:0006601!4.07e-21!102;UBERON:0000073!4.37e-21!75;UBERON:0001016!4.37e-21!75;UBERON:0000033!4.46e-21!63;UBERON:0000955!2.56e-20!50;UBERON:0006238!2.56e-20!50;UBERON:0002020!7.10e-20!34;UBERON:0002616!8.23e-20!49;UBERON:0003056!5.18e-19!49;UBERON:0003080!1.15e-17!40;UBERON:0002780!4.75e-17!39;UBERON:0001890!4.75e-17!39;UBERON:0006240!4.75e-17!39;UBERON:0002791!4.82e-17!29;UBERON:0003528!4.82e-17!29;UBERON:0001893!4.82e-17!29;UBERON:0007811!7.85e-17!86;UBERON:0000153!1.43e-16!94;UBERON:0000956!1.96e-12!21;UBERON:0001869!1.96e-12!21;UBERON:0000203!1.96e-12!21;UBERON:0002619!5.19e-10!17;UBERON:0002021!1.36e-08!10;UBERON:0000411!1.36e-08!10;UBERON:0001950!1.36e-08!10;UBERON:0000468!1.61e-07!333 | |ontology_enrichment_uberon=UBERON:0002346!1.21e-23!71;UBERON:0003075!1.21e-23!71;UBERON:0007284!1.21e-23!71;UBERON:0001017!9.68e-22!73;UBERON:0005743!9.68e-22!73;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0004121!4.07e-21!102;UBERON:0000924!4.07e-21!102;UBERON:0006601!4.07e-21!102;UBERON:0000073!4.37e-21!75;UBERON:0001016!4.37e-21!75;UBERON:0000033!4.46e-21!63;UBERON:0000955!2.56e-20!50;UBERON:0006238!2.56e-20!50;UBERON:0002020!7.10e-20!34;UBERON:0002616!8.23e-20!49;UBERON:0003056!5.18e-19!49;UBERON:0003080!1.15e-17!40;UBERON:0002780!4.75e-17!39;UBERON:0001890!4.75e-17!39;UBERON:0006240!4.75e-17!39;UBERON:0002791!4.82e-17!29;UBERON:0003528!4.82e-17!29;UBERON:0001893!4.82e-17!29;UBERON:0007811!7.85e-17!86;UBERON:0000153!1.43e-16!94;UBERON:0000956!1.96e-12!21;UBERON:0001869!1.96e-12!21;UBERON:0000203!1.96e-12!21;UBERON:0002619!5.19e-10!17;UBERON:0002021!1.36e-08!10;UBERON:0000411!1.36e-08!10;UBERON:0001950!1.36e-08!10;UBERON:0000468!1.61e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.19e-25,54;UBERON:0001049,1.44e-23,52;UBERON:0005068,1.44e-23,52;UBERON:0006241,1.44e-23,52;UBERON:0007135,1.44e-23,52;UBERON:0001017,6.17e-23,73;UBERON:0002346,1.23e-22,64;UBERON:0003075,1.23e-22,64;UBERON:0007284,1.23e-22,64;UBERON:0002020,1.32e-22,34;UBERON:0001016,1.17e-21,75;UBERON:0000955,4.11e-20,47;UBERON:0006238,4.11e-20,47;UBERON:0003056,1.42e-19,49;UBERON:0002616,1.57e-19,46;UBERON:0010371,3.09e-19,73;UBERON:0003528,3.10e-19,29;UBERON:0002791,3.10e-19,29;UBERON:0001893,3.10e-19,29;UBERON:0004121,4.60e-19,95;UBERON:0000924,4.60e-19,95;UBERON:0006601,4.60e-19,95;UBERON:0003080,1.98e-18,40;UBERON:0002780,1.02e-17,39;UBERON:0001890,1.02e-17,39;UBERON:0006240,1.02e-17,39;UBERON:0010314,5.13e-15,92;UBERON:0000956,9.32e-14,21;UBERON:0001869,9.32e-14,21;UBERON:0000203,9.32e-14,21;UBERON:0002619,6.86e-11,17;UBERON:0002021,6.04e-10,10;UBERON:0000411,6.04e-10,10;UBERON:0001950,6.04e-10,10 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,19.0177473208022,21.6886301501533,20.2826049121977,0,0,0,0,0,1.79760066311043,1.15265491596466,23.6412316063329,28.0812351729917,29.8661445118962,19.4242669394586,13.4729809980484,19.5985278743926,19.1690942036473,32.1726575313507,24.2254938198655,24.6436562504412,17.8183578577242,31.3889364797861,30.2824100323976,26.045668527838,16.7509799400829,15.1945904708554,15.8910177687883,26.2219441071564,20.786265396669,31.3151068986505,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,2.81686839553361,0,0,0,0,0,0,0.5709193985953,0,9.94562331734326,1.90833859442749,5.1759131313064,1.84492397804847,2.41156224884196,2.58695155698551,6.78599593180248,0,0,0.884610551949874,0.323533699894818,0.441683036920787,0.484875253135222,0,76.7085688170254,81.8936623640609,0,0,0,0,27.861058929297,83.26510971299,47.246036394437,95.0819031451752,95.3818655842133,26.8046577481833,40.0735919777361,1.73126918545538,0.248813941220186,0,1.89397670297827,0.520481771850815,2.29902104433473,2.34080768746954,3.16480117455002,4.83059143974428,3.71529788826064,4.49768277886698,4.13925393182425,1.5089759505299,1.70195472151037,1.40760899331159,1.09597866213787,2.22437799380478,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,39.9550902271842,62.8747181637428,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.80673409849337,0,0.760902504450237,0,0.164698954724011,0,0,0,0,0,0,1.13800740571849,1.71372768914593,0,1.83286195060783,1.16371492300575,1.1221731182451,0.758838445491087,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0.369506380333209,2.08440552947533,3.25929952884052,3.05541154395339,1.64283173801951,2.1775813467436,0.476087281772027,0.195133647857799,2.04925687338048,3.32197034473162,0.797273843287435,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,17.0183625387059,16.0580010631318,0,1.26235463602186,0.315508219416257,0,0.430846795465598,0.716906393857656,2.45078541490634,2.26461224631066,0,0.584511715822624,1.18586333383957,14.4594592389813,0.425820255624806,2.49291845134157,0.977321756121456,2.63952196756057,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,2.16073312837572,1.81102157295856,0.643011105094777,0.354680467284547,1.78368817602071,1.64549020602121,1.2178597964584,0.704015124191131,0,0.220528398054962,1.31909002353184,0,0.180938774784468,0.119372344003136,0.164140899745061,0.291480836629851,18.7279555030615,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.432021363287205,0.209088296014469,0,0.404593039154462,0.330613822901344,0,0,0,0.56369293868419,0.747582730219894,0.330916980914195,0.388902376688095,1.42075805825504,0.675824501963113,1.40828686374905,0.911430693907651,1.57289016638566,0.483168241652012,0,0.316011120628178,4.86540516696394,2.56777392912068,2.33857481360031,3.58053391334963,2.78153896693771,3.60586348559907,2.65841148914239,2.22126189885925,3.58171991278499,2.21817607301049,1.07203668813728,0.769694733122636,0.935015217452552,0.453460767230423,1.33191572024439,2.15313255862742,1.67884616364078,0,1.12609485270709,0.183151624267265,0,0.501572104035363,119.727390634818,104.954153923636,111.714625120682,90.222920730436,104.817625524908,101.97817614761,101.928397535003,95.0177738803105,116.004456699956,112.353987650145,0.93408612825759,6.3843979744165,4.26834014385335,4.86213434136588,3.5634237646757,5.33146174505041,6.66740183404846,5.15087643097235,10.5903339165299,7.32821914115013,6.33698249725599,7.73367999682912,6.27398100048212,7.36289252655997,6.71994986780675,5.23923060411381,6.83717523074647,5.59436739344745,7.82963211526283,6.47675248591348,6.85738504770831,4.2594193478241,7.86839426826159,5.37781741539616,4.98779716201252,7.36147088657586,5.67076715905595,6.31367307450823,6.24698923690964,6.17256498823512,6.4062909787054,5.81176446015824,6.95692773388472,5.73266312388074,5.40138510747196,22.982573170291,5.14649538579898,7.73535794573874,1.3390183244819,2.20591419119516,1.62307484934295 | |phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,19.0177473208022,21.6886301501533,20.2826049121977,0,0,0,0,0,1.79760066311043,1.15265491596466,23.6412316063329,28.0812351729917,29.8661445118962,19.4242669394586,13.4729809980484,19.5985278743926,19.1690942036473,32.1726575313507,24.2254938198655,24.6436562504412,17.8183578577242,31.3889364797861,30.2824100323976,26.045668527838,16.7509799400829,15.1945904708554,15.8910177687883,26.2219441071564,20.786265396669,31.3151068986505,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,2.81686839553361,0,0,0,0,0,0,0.5709193985953,0,9.94562331734326,1.90833859442749,5.1759131313064,1.84492397804847,2.41156224884196,2.58695155698551,6.78599593180248,0,0,0.884610551949874,0.323533699894818,0.441683036920787,0.484875253135222,0,76.7085688170254,81.8936623640609,0,0,0,0,27.861058929297,83.26510971299,47.246036394437,95.0819031451752,95.3818655842133,26.8046577481833,40.0735919777361,1.73126918545538,0.248813941220186,0,1.89397670297827,0.520481771850815,2.29902104433473,2.34080768746954,3.16480117455002,4.83059143974428,3.71529788826064,4.49768277886698,4.13925393182425,1.5089759505299,1.70195472151037,1.40760899331159,1.09597866213787,2.22437799380478,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,39.9550902271842,62.8747181637428,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.80673409849337,0,0.760902504450237,0,0.164698954724011,0,0,0,0,0,0,1.13800740571849,1.71372768914593,0,1.83286195060783,1.16371492300575,1.1221731182451,0.758838445491087,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0.393117990226406,0.224862112384854,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0.369506380333209,2.08440552947533,3.25929952884052,3.05541154395339,1.64283173801951,2.1775813467436,0.476087281772027,0.195133647857799,2.04925687338048,3.32197034473162,0.797273843287435,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,17.0183625387059,16.0580010631318,0,1.26235463602186,0.315508219416257,0,0.430846795465598,0.716906393857656,2.45078541490634,2.26461224631066,0,0.584511715822624,1.18586333383957,14.4594592389813,0.425820255624806,2.49291845134157,0.977321756121456,2.63952196756057,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,2.16073312837572,1.81102157295856,0.643011105094777,0.354680467284547,1.78368817602071,1.64549020602121,1.2178597964584,0.704015124191131,0,0.220528398054962,1.31909002353184,0,0.180938774784468,0.119372344003136,0.164140899745061,0.291480836629851,18.7279555030615,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.432021363287205,0.209088296014469,0,0.404593039154462,0.330613822901344,0,0,0,0.56369293868419,0.747582730219894,0.330916980914195,0.388902376688095,1.42075805825504,0.675824501963113,1.40828686374905,0.911430693907651,1.57289016638566,0.483168241652012,0,0.316011120628178,4.86540516696394,2.56777392912068,2.33857481360031,3.58053391334963,2.78153896693771,3.60586348559907,2.65841148914239,2.22126189885925,3.58171991278499,2.21817607301049,1.07203668813728,0.769694733122636,0.935015217452552,0.453460767230423,1.33191572024439,2.15313255862742,1.67884616364078,0,1.12609485270709,0.183151624267265,0,0.501572104035363,119.727390634818,104.954153923636,111.714625120682,90.222920730436,104.817625524908,101.97817614761,101.928397535003,95.0177738803105,116.004456699956,112.353987650145,0.93408612825759,6.3843979744165,4.26834014385335,4.86213434136588,3.5634237646757,5.33146174505041,6.66740183404846,5.15087643097235,10.5903339165299,7.32821914115013,6.33698249725599,7.73367999682912,6.27398100048212,7.36289252655997,6.71994986780675,5.23923060411381,6.83717523074647,5.59436739344745,7.82963211526283,6.47675248591348,6.85738504770831,4.2594193478241,7.86839426826159,5.37781741539616,4.98779716201252,7.36147088657586,5.67076715905595,6.31367307450823,6.24698923690964,6.17256498823512,6.4062909787054,5.81176446015824,6.95692773388472,5.73266312388074,5.40138510747196,22.982573170291,5.14649538579898,7.73535794573874,1.3390183244819,2.20591419119516,1.62307484934295 | ||
|short_description=p1@D430041D05Rik | |short_description=p1@D430041D05Rik | ||
}} | }} |
Latest revision as of 22:02, 1 October 2015
Short description: | p1@D430041D05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D430041D05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -269bp_to_ENSMUST00000089726, ENSMUST00000165018, NM_001033347, uc008ljr.1_5end |
EntrezGene: | D430041D05Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.72e-16 | 23 |
neuroblast (sensu Vertebrata) | 5.72e-16 | 23 |
neuron | 6.30e-11 | 33 |
neuronal stem cell | 6.30e-11 | 33 |
neuroblast | 6.30e-11 | 33 |
electrically signaling cell | 6.30e-11 | 33 |
electrically responsive cell | 1.15e-07 | 39 |
electrically active cell | 1.15e-07 | 39 |
ectodermal cell | 3.15e-07 | 44 |
neurectodermal cell | 3.15e-07 | 44 |
neural cell | 5.27e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.19e-25 | 54 |
neural tube | 1.44e-23 | 52 |
neural rod | 1.44e-23 | 52 |
future spinal cord | 1.44e-23 | 52 |
neural keel | 1.44e-23 | 52 |
central nervous system | 6.17e-23 | 73 |
neurectoderm | 1.23e-22 | 64 |
neural plate | 1.23e-22 | 64 |
presumptive neural plate | 1.23e-22 | 64 |
gray matter | 1.32e-22 | 34 |
nervous system | 1.17e-21 | 75 |
brain | 4.11e-20 | 47 |
future brain | 4.11e-20 | 47 |
pre-chordal neural plate | 1.42e-19 | 49 |
regional part of brain | 1.57e-19 | 46 |
ecto-epithelium | 3.09e-19 | 73 |
brain grey matter | 3.10e-19 | 29 |
regional part of telencephalon | 3.10e-19 | 29 |
telencephalon | 3.10e-19 | 29 |
ectoderm-derived structure | 4.60e-19 | 95 |
ectoderm | 4.60e-19 | 95 |
presumptive ectoderm | 4.60e-19 | 95 |
anterior neural tube | 1.98e-18 | 40 |
regional part of forebrain | 1.02e-17 | 39 |
forebrain | 1.02e-17 | 39 |
future forebrain | 1.02e-17 | 39 |
structure with developmental contribution from neural crest | 5.13e-15 | 92 |
cerebral cortex | 9.32e-14 | 21 |
cerebral hemisphere | 9.32e-14 | 21 |
pallium | 9.32e-14 | 21 |
regional part of cerebral cortex | 6.86e-11 | 17 |
occipital lobe | 6.04e-10 | 10 |
visual cortex | 6.04e-10 | 10 |
neocortex | 6.04e-10 | 10 |