FFCP PHASE1:Mm9::chr11:68903458..68903499,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:68903458..68903499,+ | |||
|description=CAGE_peak_at_chr11:68903458..68903499,+ | |description=CAGE_peak_at_chr11:68903458..68903499,+ | ||
|id=chr11:68903458..68903499,+ | |id=chr11:68903458..68903499,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.05e-09!23;CL:0000337!4.05e-09!23 | |ontology_enrichment_celltype=CL:0000117!4.05e-09!23;CL:0000337!4.05e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.57e-17,23;CL:0000337,9.57e-17,23;CL:0000540,1.27e-10,33;CL:0000047,1.27e-10,33;CL:0000031,1.27e-10,33;CL:0000404,1.27e-10,33;CL:0002319,1.56e-08,43;CL:0000393,1.77e-08,39;CL:0000211,1.77e-08,39;CL:0000221,2.93e-08,44;CL:0000133,2.93e-08,44;CL:0002610,2.41e-07,3;CL:0002614,7.01e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.14e-16!34;UBERON:0001049!9.59e-16!52;UBERON:0005068!9.59e-16!52;UBERON:0006241!9.59e-16!52;UBERON:0007135!9.59e-16!52;UBERON:0001017!9.70e-16!73;UBERON:0005743!9.70e-16!73;UBERON:0000073!2.32e-15!75;UBERON:0001016!2.32e-15!75;UBERON:0000955!4.64e-15!50;UBERON:0006238!4.64e-15!50;UBERON:0002616!2.02e-14!49;UBERON:0002791!4.87e-13!29;UBERON:0003528!4.87e-13!29;UBERON:0001893!4.87e-13!29;UBERON:0004121!6.09e-13!102;UBERON:0000924!6.09e-13!102;UBERON:0006601!6.09e-13!102;UBERON:0002346!9.75e-13!71;UBERON:0003075!9.75e-13!71;UBERON:0007284!9.75e-13!71;UBERON:0003080!2.18e-11!40;UBERON:0000033!2.58e-11!63;UBERON:0002780!6.19e-11!39;UBERON:0001890!6.19e-11!39;UBERON:0006240!6.19e-11!39;UBERON:0000956!3.62e-09!21;UBERON:0001869!3.62e-09!21;UBERON:0000203!3.62e-09!21;UBERON:0003056!4.20e-09!49;UBERON:0002619!4.31e-09!17;UBERON:0002021!1.97e-08!10;UBERON:0000411!1.97e-08!10;UBERON:0001950!1.97e-08!10;UBERON:0007811!2.08e-07!86;UBERON:0000153!6.13e-07!94 | |ontology_enrichment_uberon=UBERON:0002020!8.14e-16!34;UBERON:0001049!9.59e-16!52;UBERON:0005068!9.59e-16!52;UBERON:0006241!9.59e-16!52;UBERON:0007135!9.59e-16!52;UBERON:0001017!9.70e-16!73;UBERON:0005743!9.70e-16!73;UBERON:0000073!2.32e-15!75;UBERON:0001016!2.32e-15!75;UBERON:0000955!4.64e-15!50;UBERON:0006238!4.64e-15!50;UBERON:0002616!2.02e-14!49;UBERON:0002791!4.87e-13!29;UBERON:0003528!4.87e-13!29;UBERON:0001893!4.87e-13!29;UBERON:0004121!6.09e-13!102;UBERON:0000924!6.09e-13!102;UBERON:0006601!6.09e-13!102;UBERON:0002346!9.75e-13!71;UBERON:0003075!9.75e-13!71;UBERON:0007284!9.75e-13!71;UBERON:0003080!2.18e-11!40;UBERON:0000033!2.58e-11!63;UBERON:0002780!6.19e-11!39;UBERON:0001890!6.19e-11!39;UBERON:0006240!6.19e-11!39;UBERON:0000956!3.62e-09!21;UBERON:0001869!3.62e-09!21;UBERON:0000203!3.62e-09!21;UBERON:0003056!4.20e-09!49;UBERON:0002619!4.31e-09!17;UBERON:0002021!1.97e-08!10;UBERON:0000411!1.97e-08!10;UBERON:0001950!1.97e-08!10;UBERON:0007811!2.08e-07!86;UBERON:0000153!6.13e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.35e-33,54;UBERON:0001017,6.96e-32,73;UBERON:0001016,8.13e-31,75;UBERON:0001049,1.36e-27,52;UBERON:0005068,1.36e-27,52;UBERON:0006241,1.36e-27,52;UBERON:0007135,1.36e-27,52;UBERON:0002020,2.74e-27,34;UBERON:0000955,1.47e-26,47;UBERON:0006238,1.47e-26,47;UBERON:0002616,7.41e-25,46;UBERON:0003528,4.47e-24,29;UBERON:0002791,4.47e-24,29;UBERON:0001893,4.47e-24,29;UBERON:0004121,4.65e-24,95;UBERON:0000924,4.65e-24,95;UBERON:0006601,4.65e-24,95;UBERON:0002021,3.48e-23,10;UBERON:0000411,3.48e-23,10;UBERON:0001950,3.48e-23,10;UBERON:0002346,9.79e-23,64;UBERON:0003075,9.79e-23,64;UBERON:0007284,9.79e-23,64;UBERON:0002780,7.08e-21,39;UBERON:0001890,7.08e-21,39;UBERON:0006240,7.08e-21,39;UBERON:0003080,3.22e-20,40;UBERON:0010371,4.70e-19,73;UBERON:0003056,4.64e-17,49;UBERON:0000956,1.87e-16,21;UBERON:0001869,1.87e-16,21;UBERON:0000203,1.87e-16,21;UBERON:0002619,1.93e-15,17;UBERON:0010314,1.17e-13,92;UBERON:0000025,7.37e-09,114;UBERON:0002420,9.03e-09,8;UBERON:0007245,9.03e-09,8;UBERON:0010009,9.03e-09,8;UBERON:0010011,9.03e-09,8;UBERON:0000454,9.03e-09,8;UBERON:0004111,7.60e-08,122;UBERON:0003076,7.77e-08,12;UBERON:0003057,7.77e-08,12;UBERON:0011216,1.53e-07,194;UBERON:0004684,2.41e-07,3;UBERON:0002275,2.41e-07,3;UBERON:0002038,7.01e-07,3;UBERON:0009663,7.01e-07,3;UBERON:0009661,7.01e-07,3;UBERON:0000125,7.01e-07,3;UBERON:0002308,7.01e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0.34243593645101,0.0797721589953364,0,0,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,0.680346321208558,0,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.777719596297134,0,1.43752564364972,0,0,0.336093799142464,0,0.286533439938757,0,1.21389876515759,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,2.1314403448383,0,0,0.103689612308478,1.08004750665353,0.210324961351382,0.856952953211411,1.76694832761291,0.367472397644862,0.670918297127655,0,3.30347642998166,3.95830748064082,2.61131106535614,0.395658863190582,1.46380229763855,2.08365348222704,2.51264699101243,2.8138130501584,1.98637722109853,4.12480019663135,3.27454865837937,0.745597783301202,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0.70667914902068,0.14084341977668,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.304465478312141,0,0.452167921657868,0.352766121407114,0.376999773989026,0.741584903203122,0.289198713839823,0.884610551949874,0,0.220841518460394,0,0,4.68449275218475,2.09446706813455,0.255457055208591,0.239630249011841,0,0.254140454146129,0.898743836428936,2.28750301409313,0.628271760564322,2.60736480288415,3.58001640262463,3.74018480207208,2.92034273521964,0.101839363850316,0,0.252722758433675,1.05220927943237,0,0,0,0,0.476255494059295,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,0,0.411564272815887,0,0,0,0.284163499395593,0,0,0,0.473489471170421,0.590292695242212,0.308534225774757,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.402619256281115,5.04695876553905,0.720332286654991,0.660837565967596,0,0.213288250535234,0,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.590440591918409,0.784993639206874,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0,0,0.469380496577004,0,0,0.585400943573396,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0.275936746304732,2.0871576698413,1.28932855251423,0.163934945376675,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0,4.4984984299053,0.425820255624806,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,0,0.493647061806363,0,0.23467170806371,0,0.220528398054962,0.49465875882444,0.322928853391811,0.301564624640779,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0,0.185194527369712,0,0.136694227721025,0.686334519619568,0,0,0.276399947608848,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0.404593039154462,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.506868376472335,0.234714477291508,0,0.314578033277133,0,0,0.316011120628178,0.405450430580328,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0,0.226730383615211,0,0.269141569828427,0.167884616364078,0.579568782096571,0.187682475451182,0.73260649706906,0,0.501572104035363,14.6835479080437,3.68260189205742,12.0308057822273,5.84300819968538,6.85082519770642,6.7985450765073,5.40018000185445,6.30449684513909,4.98456649882625,3.62432218226274,0.207574695168353,0.798049746802062,0.170733605754134,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.320125762024346,0.287177344778066,0.952587382566147,0.579421629724277,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0.34243593645101,0.0797721589953364,0,0,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,0.680346321208558,0,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0.777719596297134,0,1.43752564364972,0,0,0.336093799142464,0,0.286533439938757,0,1.21389876515759,1.05798195854407,1.26766280701236,0.338844532069132,0,0,0,2.1314403448383,0,0,0.103689612308478,1.08004750665353,0.210324961351382,0.856952953211411,1.76694832761291,0.367472397644862,0.670918297127655,0,3.30347642998166,3.95830748064082,2.61131106535614,0.395658863190582,1.46380229763855,2.08365348222704,2.51264699101243,2.8138130501584,1.98637722109853,4.12480019663135,3.27454865837937,0.745597783301202,0.151452386666368,0.226714680320357,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0.70667914902068,0.14084341977668,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.304465478312141,0,0.452167921657868,0.352766121407114,0.376999773989026,0.741584903203122,0.289198713839823,0.884610551949874,0,0.220841518460394,0,0,4.68449275218475,2.09446706813455,0.255457055208591,0.239630249011841,0,0.254140454146129,0.898743836428936,2.28750301409313,0.628271760564322,2.60736480288415,3.58001640262463,3.74018480207208,2.92034273521964,0.101839363850316,0,0.252722758433675,1.05220927943237,0,0,0,0,0.476255494059295,0.12811372028485,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,0,0.411564272815887,0,0,0,0.284163499395593,0,0,0,0.473489471170421,0.590292695242212,0.308534225774757,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0.402619256281115,5.04695876553905,0.720332286654991,0.660837565967596,0,0.213288250535234,0,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.590440591918409,0.784993639206874,0.123397163921801,0.296452627087149,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0,0,0.469380496577004,0,0,0.585400943573396,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0.275936746304732,2.0871576698413,1.28932855251423,0.163934945376675,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0,4.4984984299053,0.425820255624806,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,0,0.493647061806363,0,0.23467170806371,0,0.220528398054962,0.49465875882444,0.322928853391811,0.301564624640779,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0,0.185194527369712,0,0.136694227721025,0.686334519619568,0,0,0.276399947608848,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0.404593039154462,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.506868376472335,0.234714477291508,0,0.314578033277133,0,0,0.316011120628178,0.405450430580328,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0,0.226730383615211,0,0.269141569828427,0.167884616364078,0.579568782096571,0.187682475451182,0.73260649706906,0,0.501572104035363,14.6835479080437,3.68260189205742,12.0308057822273,5.84300819968538,6.85082519770642,6.7985450765073,5.40018000185445,6.30449684513909,4.98456649882625,3.62432218226274,0.207574695168353,0.798049746802062,0.170733605754134,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.320125762024346,0.287177344778066,0.952587382566147,0.579421629724277,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr11:68903458..68903499,+ | |short_description=p@chr11:68903458..68903499,+ | ||
}} | }} |
Latest revision as of 09:24, 6 August 2015
Short description: | p@chr11:68903458..68903499, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:68903458..68903499, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.57e-17 | 23 |
neuroblast (sensu Vertebrata) | 9.57e-17 | 23 |
neuron | 1.27e-10 | 33 |
neuronal stem cell | 1.27e-10 | 33 |
neuroblast | 1.27e-10 | 33 |
electrically signaling cell | 1.27e-10 | 33 |
neural cell | 1.56e-08 | 43 |
electrically responsive cell | 1.77e-08 | 39 |
electrically active cell | 1.77e-08 | 39 |
ectodermal cell | 2.93e-08 | 44 |
neurectodermal cell | 2.93e-08 | 44 |
raphe nuclei neuron | 2.41e-07 | 3 |
neuron of the substantia nigra | 7.01e-07 | 3 |