FFCP PHASE1:Mm9::chr8:124967535..124967559,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100689703 | |EntrezGene=100689703 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1276 | |MCL_coexpression_id=1276 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000059529,NR_045696_5end | |association_with_transcript=0bp_to_ENSMUST00000059529,NR_045696_5end | ||
|cluster_id=chr8:124967535..124967559,+ | |||
|description=CAGE_peak_1_at_9330133O14Rik_5end | |description=CAGE_peak_1_at_9330133O14Rik_5end | ||
|id=chr8:124967535..124967559,+ | |id=chr8:124967535..124967559,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.07e-08!23;CL:0000337!1.07e-08!23 | |ontology_enrichment_celltype=CL:0000117!1.07e-08!23;CL:0000337!1.07e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.78e-10,23;CL:0000337,1.78e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!5.91e-18!94;UBERON:0007811!5.99e-16!86;UBERON:0000033!3.03e-13!63;UBERON:0000955!4.92e-13!50;UBERON:0006238!4.92e-13!50;UBERON:0003056!5.20e-13!49;UBERON:0001049!7.00e-13!52;UBERON:0005068!7.00e-13!52;UBERON:0006241!7.00e-13!52;UBERON:0007135!7.00e-13!52;UBERON:0002616!1.59e-12!49;UBERON:0003080!1.66e-12!40;UBERON:0002780!4.76e-12!39;UBERON:0001890!4.76e-12!39;UBERON:0006240!4.76e-12!39;UBERON:0002020!1.09e-10!34;UBERON:0002346!2.00e-10!71;UBERON:0003075!2.00e-10!71;UBERON:0007284!2.00e-10!71;UBERON:0002791!2.97e-10!29;UBERON:0003528!2.97e-10!29;UBERON:0001893!2.97e-10!29;UBERON:0001017!2.03e-09!73;UBERON:0005743!2.03e-09!73;UBERON:0004121!7.76e-09!102;UBERON:0000924!7.76e-09!102;UBERON:0006601!7.76e-09!102;UBERON:0000073!1.33e-08!75;UBERON:0001016!1.33e-08!75;UBERON:0000956!3.02e-07!21;UBERON:0001869!3.02e-07!21;UBERON:0000203!3.02e-07!21 | |ontology_enrichment_uberon=UBERON:0000153!5.91e-18!94;UBERON:0007811!5.99e-16!86;UBERON:0000033!3.03e-13!63;UBERON:0000955!4.92e-13!50;UBERON:0006238!4.92e-13!50;UBERON:0003056!5.20e-13!49;UBERON:0001049!7.00e-13!52;UBERON:0005068!7.00e-13!52;UBERON:0006241!7.00e-13!52;UBERON:0007135!7.00e-13!52;UBERON:0002616!1.59e-12!49;UBERON:0003080!1.66e-12!40;UBERON:0002780!4.76e-12!39;UBERON:0001890!4.76e-12!39;UBERON:0006240!4.76e-12!39;UBERON:0002020!1.09e-10!34;UBERON:0002346!2.00e-10!71;UBERON:0003075!2.00e-10!71;UBERON:0007284!2.00e-10!71;UBERON:0002791!2.97e-10!29;UBERON:0003528!2.97e-10!29;UBERON:0001893!2.97e-10!29;UBERON:0001017!2.03e-09!73;UBERON:0005743!2.03e-09!73;UBERON:0004121!7.76e-09!102;UBERON:0000924!7.76e-09!102;UBERON:0006601!7.76e-09!102;UBERON:0000073!1.33e-08!75;UBERON:0001016!1.33e-08!75;UBERON:0000956!3.02e-07!21;UBERON:0001869!3.02e-07!21;UBERON:0000203!3.02e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.23e-18,52;UBERON:0005068,3.23e-18,52;UBERON:0006241,3.23e-18,52;UBERON:0007135,3.23e-18,52;UBERON:0000073,6.59e-18,54;UBERON:0000955,1.10e-17,47;UBERON:0006238,1.10e-17,47;UBERON:0003080,4.67e-17,40;UBERON:0002616,6.26e-17,46;UBERON:0002780,2.23e-16,39;UBERON:0001890,2.23e-16,39;UBERON:0006240,2.23e-16,39;UBERON:0001017,4.49e-16,73;UBERON:0001016,3.29e-15,75;UBERON:0002020,3.52e-15,34;UBERON:0002346,6.30e-15,64;UBERON:0003075,6.30e-15,64;UBERON:0007284,6.30e-15,64;UBERON:0003528,7.47e-15,29;UBERON:0002791,7.47e-15,29;UBERON:0001893,7.47e-15,29;UBERON:0003056,8.39e-15,49;UBERON:0010371,1.29e-14,73;UBERON:0004121,1.80e-14,95;UBERON:0000924,1.80e-14,95;UBERON:0006601,1.80e-14,95;UBERON:0000956,5.23e-11,21;UBERON:0001869,5.23e-11,21;UBERON:0000203,5.23e-11,21;UBERON:0010314,2.73e-08,92;UBERON:0002619,9.12e-08,17 | |||
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| ||
|short_description=p1@9330133O14Rik | |short_description=p1@9330133O14Rik | ||
}} | }} |
Latest revision as of 16:12, 1 October 2015
Short description: | p1@9330133O14Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_9330133O14Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1276 |
Association with transcript: | 0bp_to_ENSMUST00000059529, NR_045696_5end |
EntrezGene: | 9330133O14Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.78e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.78e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.23e-18 | 52 |
neural rod | 3.23e-18 | 52 |
future spinal cord | 3.23e-18 | 52 |
neural keel | 3.23e-18 | 52 |
regional part of nervous system | 6.59e-18 | 54 |
brain | 1.10e-17 | 47 |
future brain | 1.10e-17 | 47 |
anterior neural tube | 4.67e-17 | 40 |
regional part of brain | 6.26e-17 | 46 |
regional part of forebrain | 2.23e-16 | 39 |
forebrain | 2.23e-16 | 39 |
future forebrain | 2.23e-16 | 39 |
central nervous system | 4.49e-16 | 73 |
nervous system | 3.29e-15 | 75 |
gray matter | 3.52e-15 | 34 |
neurectoderm | 6.30e-15 | 64 |
neural plate | 6.30e-15 | 64 |
presumptive neural plate | 6.30e-15 | 64 |
brain grey matter | 7.47e-15 | 29 |
regional part of telencephalon | 7.47e-15 | 29 |
telencephalon | 7.47e-15 | 29 |
pre-chordal neural plate | 8.39e-15 | 49 |
ecto-epithelium | 1.29e-14 | 73 |
ectoderm-derived structure | 1.80e-14 | 95 |
ectoderm | 1.80e-14 | 95 |
presumptive ectoderm | 1.80e-14 | 95 |
cerebral cortex | 5.23e-11 | 21 |
cerebral hemisphere | 5.23e-11 | 21 |
pallium | 5.23e-11 | 21 |
structure with developmental contribution from neural crest | 2.73e-08 | 92 |
regional part of cerebral cortex | 9.12e-08 | 17 |