FFCP PHASE1:Mm9::chr1:135937391..135937415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |MCL_coexpression_id=148 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135937391..135937415,+ | |||
|description=CAGE_peak_at_chr1:135937391..135937415,+ | |description=CAGE_peak_at_chr1:135937391..135937415,+ | ||
|id=chr1:135937391..135937415,+ | |id=chr1:135937391..135937415,+ | ||
|ontology_enrichment_celltype=CL:0002453!1.65e-08!8;CL:0000128!3.95e-08!6;CL:0000126!3.95e-08!6;CL:0000127!3.95e-08!6 | |ontology_enrichment_celltype=CL:0002453!1.65e-08!8;CL:0000128!3.95e-08!6;CL:0000126!3.95e-08!6;CL:0000127!3.95e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.66e-44,2;CL:0002604,1.66e-44,2;CL:0002453,2.39e-25,8;CL:0000333,1.71e-20,10;CL:0000095,1.71e-20,10;CL:0000243,1.71e-20,10;CL:0000123,1.71e-20,10;CL:0000125,1.71e-20,10;CL:0000030,1.71e-20,10;CL:0000339,1.71e-20,10;CL:0000128,1.13e-15,6;CL:0000126,1.13e-15,6;CL:0000127,1.13e-15,6;CL:0000878,4.02e-12,2;CL:0000129,4.02e-12,2;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002614,1.88e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.34e-13,7;UBERON:0003022,1.34e-13,7;UBERON:0002421,1.34e-13,7;UBERON:0000349,1.34e-13,7;UBERON:0002600,1.34e-13,7;UBERON:0002038,1.88e-08,3;UBERON:0009663,1.88e-08,3;UBERON:0009661,1.88e-08,3;UBERON:0000125,1.88e-08,3;UBERON:0002308,1.88e-08,3;UBERON:0003528,1.22e-07,29;UBERON:0002791,1.22e-07,29;UBERON:0001893,1.22e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.101376931219515,0,0.782391344348039,0.436050312760893,4.61340983742391,11.4713640453827,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,1.92109152660777,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,1.68828783009504,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0.43839146485515,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.651859905768103,0.339490171550376,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0.249810577937946,0.467863216890817,0,0.956441660344217,0.882365676478062,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.101376931219515,0,0.782391344348039,0.436050312760893,4.61340983742391,11.4713640453827,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,1.92109152660777,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,1.68828783009504,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,0,0,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0.43839146485515,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.651859905768103,0.339490171550376,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0,0.385813221962283,0.249810577937946,0.467863216890817,0,0.956441660344217,0.882365676478062,0.231867835620421 | ||
|short_description=p@chr1:135937391..135937415,+ | |short_description=p@chr1:135937391..135937415,+ | ||
}} | }} |
Latest revision as of 19:56, 4 August 2015
Short description: | p@chr1:135937391..135937415, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135937391..135937415, + |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.66e-44 | 2 |
astrocyte of the hippocampus | 1.66e-44 | 2 |
oligodendrocyte precursor cell | 2.39e-25 | 8 |
migratory neural crest cell | 1.71e-20 | 10 |
neuron associated cell | 1.71e-20 | 10 |
glial cell (sensu Vertebrata) | 1.71e-20 | 10 |
neuron associated cell (sensu Vertebrata) | 1.71e-20 | 10 |
glial cell | 1.71e-20 | 10 |
glioblast | 1.71e-20 | 10 |
glioblast (sensu Vertebrata) | 1.71e-20 | 10 |
oligodendrocyte | 1.13e-15 | 6 |
macroglial cell | 1.13e-15 | 6 |
astrocyte | 1.13e-15 | 6 |
central nervous system macrophage | 4.02e-12 | 2 |
microglial cell | 4.02e-12 | 2 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
neuron of the substantia nigra | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.34e-13 | 7 |
lobe parts of cerebral cortex | 1.34e-13 | 7 |
hippocampal formation | 1.34e-13 | 7 |
limbic system | 1.34e-13 | 7 |
limbic lobe | 1.34e-13 | 7 |
substantia nigra | 1.88e-08 | 3 |
telencephalic nucleus | 1.88e-08 | 3 |
midbrain nucleus | 1.88e-08 | 3 |
neural nucleus | 1.88e-08 | 3 |
nucleus of brain | 1.88e-08 | 3 |
brain grey matter | 1.22e-07 | 29 |
regional part of telencephalon | 1.22e-07 | 29 |
telencephalon | 1.22e-07 | 29 |