FFCP PHASE1:Mm9::chr5:36100524..36100595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231148 | |EntrezGene=231148 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BL65,E9Q0W6,E9Q4K0,Q19VH2,Q3U409 | |UniProt=Q8BL65,E9Q0W6,E9Q4K0,Q19VH2,Q3U409 | ||
|association_with_transcript=0bp_to_ENSMUST00000054598,ENSMUST00000101280,ENSMUST00000114205,ENSMUST00000114206,ENSMUST00000114210,NM_001177696,NM_001177697,NM_001177698,NM_001177699,NM_001177700,NM_177678,uc008xeg.2,uc008xeh.2,uc008xei.2,uc012dve.1,uc012dvf.1,uc012dvg.1,uc012dvh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000054598,ENSMUST00000101280,ENSMUST00000114205,ENSMUST00000114206,ENSMUST00000114210,NM_001177696,NM_001177697,NM_001177698,NM_001177699,NM_001177700,NM_177678,uc008xeg.2,uc008xeh.2,uc008xei.2,uc012dve.1,uc012dvf.1,uc012dvg.1,uc012dvh.1_5end | ||
|cluster_id=chr5:36100524..36100595,+ | |||
|description=CAGE_peak_1_at_Ablim2_5end | |description=CAGE_peak_1_at_Ablim2_5end | ||
|id=chr5:36100524..36100595,+ | |id=chr5:36100524..36100595,+ | ||
|ontology_enrichment_celltype=CL:0000540!6.35e-09!33;CL:0000047!6.35e-09!33;CL:0000031!6.35e-09!33;CL:0000404!6.35e-09!33;CL:0000221!3.75e-08!44;CL:0000133!3.75e-08!44;CL:0002319!4.66e-08!43 | |ontology_enrichment_celltype=CL:0000540!6.35e-09!33;CL:0000047!6.35e-09!33;CL:0000031!6.35e-09!33;CL:0000404!6.35e-09!33;CL:0000221!3.75e-08!44;CL:0000133!3.75e-08!44;CL:0002319!4.66e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.14e-09,33;CL:0000047,4.14e-09,33;CL:0000031,4.14e-09,33;CL:0000404,4.14e-09,33;CL:0000221,3.95e-08,44;CL:0000133,3.95e-08,44;CL:0002319,4.93e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.22e-19!73;UBERON:0005743!2.22e-19!73;UBERON:0004121!1.59e-18!102;UBERON:0000924!1.59e-18!102;UBERON:0006601!1.59e-18!102;UBERON:0000073!5.31e-18!75;UBERON:0001016!5.31e-18!75;UBERON:0001049!1.11e-11!52;UBERON:0005068!1.11e-11!52;UBERON:0006241!1.11e-11!52;UBERON:0007135!1.11e-11!52;UBERON:0002346!6.06e-11!71;UBERON:0003075!6.06e-11!71;UBERON:0007284!6.06e-11!71;UBERON:0000955!8.07e-11!50;UBERON:0006238!8.07e-11!50;UBERON:0000033!1.07e-10!63;UBERON:0002020!1.75e-10!34;UBERON:0002616!2.28e-10!49;UBERON:0000468!2.89e-08!333;UBERON:0002791!4.30e-08!29;UBERON:0003528!4.30e-08!29;UBERON:0001893!4.30e-08!29;UBERON:0002021!1.16e-07!10;UBERON:0000411!1.16e-07!10;UBERON:0001950!1.16e-07!10;UBERON:0003080!5.58e-07!40 | |ontology_enrichment_uberon=UBERON:0001017!2.22e-19!73;UBERON:0005743!2.22e-19!73;UBERON:0004121!1.59e-18!102;UBERON:0000924!1.59e-18!102;UBERON:0006601!1.59e-18!102;UBERON:0000073!5.31e-18!75;UBERON:0001016!5.31e-18!75;UBERON:0001049!1.11e-11!52;UBERON:0005068!1.11e-11!52;UBERON:0006241!1.11e-11!52;UBERON:0007135!1.11e-11!52;UBERON:0002346!6.06e-11!71;UBERON:0003075!6.06e-11!71;UBERON:0007284!6.06e-11!71;UBERON:0000955!8.07e-11!50;UBERON:0006238!8.07e-11!50;UBERON:0000033!1.07e-10!63;UBERON:0002020!1.75e-10!34;UBERON:0002616!2.28e-10!49;UBERON:0000468!2.89e-08!333;UBERON:0002791!4.30e-08!29;UBERON:0003528!4.30e-08!29;UBERON:0001893!4.30e-08!29;UBERON:0002021!1.16e-07!10;UBERON:0000411!1.16e-07!10;UBERON:0001950!1.16e-07!10;UBERON:0003080!5.58e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.05e-20,73;UBERON:0004121,1.99e-19,95;UBERON:0000924,1.99e-19,95;UBERON:0006601,1.99e-19,95;UBERON:0001016,2.03e-18,75;UBERON:0010314,2.25e-13,92;UBERON:0000073,3.36e-13,54;UBERON:0010371,6.57e-13,73;UBERON:0001049,4.20e-12,52;UBERON:0005068,4.20e-12,52;UBERON:0006241,4.20e-12,52;UBERON:0007135,4.20e-12,52;UBERON:0002346,7.85e-12,64;UBERON:0003075,7.85e-12,64;UBERON:0007284,7.85e-12,64;UBERON:0002020,1.04e-10,34;UBERON:0000955,1.37e-09,47;UBERON:0006238,1.37e-09,47;UBERON:0002616,3.79e-09,46;UBERON:0003528,2.94e-08,29;UBERON:0002791,2.94e-08,29;UBERON:0001893,2.94e-08,29;UBERON:0002021,8.11e-08,10;UBERON:0000411,8.11e-08,10;UBERON:0001950,8.11e-08,10;UBERON:0003080,2.66e-07,40;UBERON:0002780,8.69e-07,39;UBERON:0001890,8.69e-07,39;UBERON:0006240,8.69e-07,39 | |||
|phase1_expression=5.44506080156299,1.39590163055744,0.909998478779072,1.81478526784098,2.50447864973174,1.51091344720701,2.10251376535973,1.54947988129892,1.68946466582,2.10658073689794,0,0.0797721589953364,1.71200729931206,1.74840804837995,0.666219523631325,0.202475267389826,0.699561878128147,0.315462165358238,0.274228867211478,0,13.1817099734158,0.297872853602656,0,0.47997726838022,0.22940928106717,0.57423196411502,1.7230479846363,0.646413698057667,2.09025761402011,3.02436155711917,2.43903561720835,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,20.342174953049,0.436050312760893,1.5378032791413,1.55543919259427,5.45947044338914,10.062679505548,0,2.90144856804538,2.01656279485478,0,2.57880095944881,3.6097046459421,9.3065571995415,19.0436752537932,8.87363964908651,0.338844532069132,0,1.3498495759221,0.988866362566974,0,33.2556122675429,41.1113586694063,1.8664130215526,1.89008313664367,1.05162480675691,57.7014988495683,55.6588723198066,2.32732518508413,2.1086003624012,1.83843757322004,83.6880695595354,61.0345476047197,64.361137434366,8.04506355154182,11.161492519494,10.4182674111352,88.7801936824391,63.5921749335798,62.0360885973849,46.2566879193658,43.9928493669228,17.5215479075783,0.530083353332288,0.529000920747499,7.24661221754194,7.74381489283248,0,2.69851595818909,3.24888208723835,2.24013443548668,8.00533194750986,0,0,0,6.05626705039726,0,0,0,0.216491041011214,0.760079596425296,1.51657333504435,4.45317130904334,1.55362730188303,12.3206975423805,0.346970653532272,2.74018930480927,1.61430848079241,2.71300752994721,3.29248379979973,6.1576629751541,7.91023896749996,4.62717942143717,6.19227386364912,16.0149181447935,7.06692859073259,5.33362778448744,14.9113408974498,66.4612409216212,63.4623521644769,3.32094171771169,0.359445373517761,1.19980546198682,0.127070227073065,82.9840142302718,43.4625572677695,17.2146462394624,67.0961875942187,63.417433417922,58.8040166103555,57.7578896521217,0.81471491080253,5.47390670684409,6.31806896084187,9.89076722666428,0,0.689706313300419,0.720248519221397,1.65775299619287,5.10273743634959,6.66191345481219,5.71580519814346,23.2833033665114,0.215567992932842,0,0.527853372491847,1.97276159184817,1.39023624612799,3.83077383174383,1.02891068203972,0.199034266818493,0,0.772043721344145,0.284163499395593,1.65700618028402,2.11073453982987,2.70093092191522,3.55117103377815,3.54175617145327,2.00547246753592,3.95307706075693,8.31647544338819,6.18856314545998,12.1774288935976,14.4467368389604,17.7540692905424,20.9065982018225,11.8557062257167,25.2308067269499,60.3532152379045,4.93942139420565,0.660837565967596,2.3800550999719,0.426576501070468,1.16118335930219,1.15980715189884,4.23535401709019,7.33847544688072,4.37518940058886,7.11793592316767,3.78807595865225,4.27269854960458,8.15721535368718,4.874102177978,5.39291645192533,3.8904848977445,6.17337947088538,0.758671603812327,0.571242563048644,2.25415471346161,2.03651327845314,1.93952487167626,2.59502533594179,2.97211724484009,3.39503340353085,2.35498091762062,3.45512058981041,4.44678940630723,0.166845105716094,0,0,0.608580364165509,0.241177159752417,0,0,1.29708181420028,1.09824565275233,4.31304619582064,2.97712758134803,1.87222603868736,4.04126204715379,3.04975602987251,4.82443521363367,4.80358294433172,0.37898282354097,0.162964976442026,0,0.234690248288502,0.837531287209079,0.476087281772027,2.53673742215138,2.04925687338048,0.44292937929755,1.43509291791738,6.22680595919804,5.69860440157455,6.07526046042349,0,2.17562273527484,1.47529281905711,2.20749397043786,76.5826314241768,75.8359612251555,0,22.9748543755979,8.51872192423893,8.98009111882268,16.8030250231583,5.4962823529087,13.3679204449436,14.7199796010193,5.66734982344852,11.6902343164525,13.8350722281283,27.9549545286972,2.83880170416537,0.35613120733451,0.977321756121456,1.81467135269789,6.63725691699814,0.971122544619926,0.604647113929502,1.13163047853539,2.65771703592696,3.3817866273832,2.58428293168221,2.90826983582004,4.63446591900138,4.74055136903724,6.32511651449993,7.21948802737308,10.8940673841212,0.18006109403131,0,1.07168517515796,1.77340233642274,2.31879462882692,2.63278432963394,1.8267896946876,0.704015124191131,3.1774810629573,6.17479514553893,10.8824926941377,4.35953952078945,6.63442174209714,14.9215430003921,20.8458942676228,6.99554007911642,90.6729726831392,1.53783792718067,0.619160603889667,1.48155621895769,0.941842285023455,1.91371918809435,3.43167259809784,0.169978429993855,0.419854356970974,0.138199973804424,2.86401185404534,0.316335993581135,0.813277868507395,1.62008011232702,2.92723614420256,2.83871332870031,3.50647300600534,4.21532624199213,3.92633912976044,16.2018716614741,8.69875038321696,0.56369293868419,1.49516546043979,0.827292452285488,2.52786544847262,0.904118764344118,1.85851738039856,0.938857909166032,1.43224823328345,2.83120229949419,0.966336483304024,2.01621004380506,1.26404448251271,0,0.410843828659309,0.25984164595559,0.537080087002444,0.39736270956253,0.7211726971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| |phase1_expression=5.44506080156299,1.39590163055744,0.909998478779072,1.81478526784098,2.50447864973174,1.51091344720701,2.10251376535973,1.54947988129892,1.68946466582,2.10658073689794,0,0.0797721589953364,1.71200729931206,1.74840804837995,0.666219523631325,0.202475267389826,0.699561878128147,0.315462165358238,0.274228867211478,0,13.1817099734158,0.297872853602656,0,0.47997726838022,0.22940928106717,0.57423196411502,1.7230479846363,0.646413698057667,2.09025761402011,3.02436155711917,2.43903561720835,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,20.342174953049,0.436050312760893,1.5378032791413,1.55543919259427,5.45947044338914,10.062679505548,0,2.90144856804538,2.01656279485478,0,2.57880095944881,3.6097046459421,9.3065571995415,19.0436752537932,8.87363964908651,0.338844532069132,0,1.3498495759221,0.988866362566974,0,33.2556122675429,41.1113586694063,1.8664130215526,1.89008313664367,1.05162480675691,57.7014988495683,55.6588723198066,2.32732518508413,2.1086003624012,1.83843757322004,83.6880695595354,61.0345476047197,64.361137434366,8.04506355154182,11.161492519494,10.4182674111352,88.7801936824391,63.5921749335798,62.0360885973849,46.2566879193658,43.9928493669228,17.5215479075783,0.530083353332288,0.529000920747499,7.24661221754194,7.74381489283248,0,2.69851595818909,3.24888208723835,2.24013443548668,8.00533194750986,0,0,0,6.05626705039726,0,0,0,0.216491041011214,0.760079596425296,1.51657333504435,4.45317130904334,1.55362730188303,12.3206975423805,0.346970653532272,2.74018930480927,1.61430848079241,2.71300752994721,3.29248379979973,6.1576629751541,7.91023896749996,4.62717942143717,6.19227386364912,16.0149181447935,7.06692859073259,5.33362778448744,14.9113408974498,66.4612409216212,63.4623521644769,3.32094171771169,0.359445373517761,1.19980546198682,0.127070227073065,82.9840142302718,43.4625572677695,17.2146462394624,67.0961875942187,63.417433417922,58.8040166103555,57.7578896521217,0.81471491080253,5.47390670684409,6.31806896084187,9.89076722666428,0,0.689706313300419,0.720248519221397,1.65775299619287,5.10273743634959,6.66191345481219,5.71580519814346,23.2833033665114,0.215567992932842,0,0.527853372491847,1.97276159184817,1.39023624612799,3.83077383174383,1.02891068203972,0.199034266818493,0,0.772043721344145,0.284163499395593,1.65700618028402,2.11073453982987,2.70093092191522,3.55117103377815,3.54175617145327,2.00547246753592,3.95307706075693,8.31647544338819,6.18856314545998,12.1774288935976,14.4467368389604,17.7540692905424,20.9065982018225,11.8557062257167,25.2308067269499,60.3532152379045,4.93942139420565,0.660837565967596,2.3800550999719,0.426576501070468,1.16118335930219,1.15980715189884,4.23535401709019,7.33847544688072,4.37518940058886,7.11793592316767,3.78807595865225,4.27269854960458,8.15721535368718,4.874102177978,5.39291645192533,3.8904848977445,6.17337947088538,0.758671603812327,0.571242563048644,2.25415471346161,2.03651327845314,1.93952487167626,2.59502533594179,2.97211724484009,3.39503340353085,2.35498091762062,3.45512058981041,4.44678940630723,0.166845105716094,0,0,0.608580364165509,0.241177159752417,0,0,1.29708181420028,1.09824565275233,4.31304619582064,2.97712758134803,1.87222603868736,4.04126204715379,3.04975602987251,4.82443521363367,4.80358294433172,0.37898282354097,0.162964976442026,0,0.234690248288502,0.837531287209079,0.476087281772027,2.53673742215138,2.04925687338048,0.44292937929755,1.43509291791738,6.22680595919804,5.69860440157455,6.07526046042349,0,2.17562273527484,1.47529281905711,2.20749397043786,76.5826314241768,75.8359612251555,0,22.9748543755979,8.51872192423893,8.98009111882268,16.8030250231583,5.4962823529087,13.3679204449436,14.7199796010193,5.66734982344852,11.6902343164525,13.8350722281283,27.9549545286972,2.83880170416537,0.35613120733451,0.977321756121456,1.81467135269789,6.63725691699814,0.971122544619926,0.604647113929502,1.13163047853539,2.65771703592696,3.3817866273832,2.58428293168221,2.90826983582004,4.63446591900138,4.74055136903724,6.32511651449993,7.21948802737308,10.8940673841212,0.18006109403131,0,1.07168517515796,1.77340233642274,2.31879462882692,2.63278432963394,1.8267896946876,0.704015124191131,3.1774810629573,6.17479514553893,10.8824926941377,4.35953952078945,6.63442174209714,14.9215430003921,20.8458942676228,6.99554007911642,90.6729726831392,1.53783792718067,0.619160603889667,1.48155621895769,0.941842285023455,1.91371918809435,3.43167259809784,0.169978429993855,0.419854356970974,0.138199973804424,2.86401185404534,0.316335993581135,0.813277868507395,1.62008011232702,2.92723614420256,2.83871332870031,3.50647300600534,4.21532624199213,3.92633912976044,16.2018716614741,8.69875038321696,0.56369293868419,1.49516546043979,0.827292452285488,2.52786544847262,0.904118764344118,1.85851738039856,0.938857909166032,1.43224823328345,2.83120229949419,0.966336483304024,2.01621004380506,1.26404448251271,0,0.410843828659309,0.25984164595559,0.537080087002444,0.39736270956253,0.7211726971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| ||
|short_description=p1@Ablim2 | |short_description=p1@Ablim2 | ||
}} | }} |
Latest revision as of 23:59, 25 September 2015
Short description: | p1@Ablim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ablim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000054598, ENSMUST00000101280, ENSMUST00000114205, ENSMUST00000114206, ENSMUST00000114210, NM_001177696, NM_001177697, NM_001177698, NM_001177699, NM_001177700, NM_177678, uc008xeg.2, uc008xeh.2, uc008xei.2, uc012dve.1, uc012dvf.1, uc012dvg.1, uc012dvh.1_5end |
EntrezGene: | Ablim2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.14e-09 | 33 |
neuronal stem cell | 4.14e-09 | 33 |
neuroblast | 4.14e-09 | 33 |
electrically signaling cell | 4.14e-09 | 33 |
ectodermal cell | 3.95e-08 | 44 |
neurectodermal cell | 3.95e-08 | 44 |
neural cell | 4.93e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.05e-20 | 73 |
ectoderm-derived structure | 1.99e-19 | 95 |
ectoderm | 1.99e-19 | 95 |
presumptive ectoderm | 1.99e-19 | 95 |
nervous system | 2.03e-18 | 75 |
structure with developmental contribution from neural crest | 2.25e-13 | 92 |
regional part of nervous system | 3.36e-13 | 54 |
ecto-epithelium | 6.57e-13 | 73 |
neural tube | 4.20e-12 | 52 |
neural rod | 4.20e-12 | 52 |
future spinal cord | 4.20e-12 | 52 |
neural keel | 4.20e-12 | 52 |
neurectoderm | 7.85e-12 | 64 |
neural plate | 7.85e-12 | 64 |
presumptive neural plate | 7.85e-12 | 64 |
gray matter | 1.04e-10 | 34 |
brain | 1.37e-09 | 47 |
future brain | 1.37e-09 | 47 |
regional part of brain | 3.79e-09 | 46 |
brain grey matter | 2.94e-08 | 29 |
regional part of telencephalon | 2.94e-08 | 29 |
telencephalon | 2.94e-08 | 29 |
occipital lobe | 8.11e-08 | 10 |
visual cortex | 8.11e-08 | 10 |
neocortex | 8.11e-08 | 10 |
anterior neural tube | 2.66e-07 | 40 |
regional part of forebrain | 8.69e-07 | 39 |
forebrain | 8.69e-07 | 39 |
future forebrain | 8.69e-07 | 39 |