FFCP PHASE1:Mm9::chr1:33964566..33964654,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320705 | |EntrezGene=320705 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q6PFX2 | |UniProt=Q6PFX2 | ||
|association_with_transcript=0bp_to_ENSMUST00000115161,ENSMUST00000129464,ENSMUST00000171943_5end | |association_with_transcript=0bp_to_ENSMUST00000115161,ENSMUST00000129464,ENSMUST00000171943_5end | ||
|cluster_id=chr1:33964566..33964654,- | |||
|description=CAGE_peak_1_at_Bend6_5end | |description=CAGE_peak_1_at_Bend6_5end | ||
|id=chr1:33964566..33964654,- | |id=chr1:33964566..33964654,- | ||
|ontology_enrichment_celltype=CL:0000117!1.16e-13!23;CL:0000337!1.16e-13!23;CL:0000221!2.77e-11!44;CL:0000133!2.77e-11!44;CL:0002319!3.77e-11!43;CL:0000540!4.59e-11!33;CL:0000047!4.59e-11!33;CL:0000031!4.59e-11!33;CL:0000404!4.59e-11!33;CL:0000393!5.40e-09!39;CL:0000211!5.40e-09!39;CL:0000055!8.09e-09!50 | |ontology_enrichment_celltype=CL:0000117!1.16e-13!23;CL:0000337!1.16e-13!23;CL:0000221!2.77e-11!44;CL:0000133!2.77e-11!44;CL:0002319!3.77e-11!43;CL:0000540!4.59e-11!33;CL:0000047!4.59e-11!33;CL:0000031!4.59e-11!33;CL:0000404!4.59e-11!33;CL:0000393!5.40e-09!39;CL:0000211!5.40e-09!39;CL:0000055!8.09e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.00e-17,23;CL:0000337,1.00e-17,23;CL:0000540,8.95e-12,33;CL:0000047,8.95e-12,33;CL:0000031,8.95e-12,33;CL:0000404,8.95e-12,33;CL:0000221,1.59e-11,44;CL:0000133,1.59e-11,44;CL:0002319,2.44e-11,43;CL:0000393,4.71e-09,39;CL:0000211,4.71e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.29e-25!75;UBERON:0001016!1.29e-25!75;UBERON:0001017!2.20e-25!73;UBERON:0005743!2.20e-25!73;UBERON:0001049!1.90e-23!52;UBERON:0005068!1.90e-23!52;UBERON:0006241!1.90e-23!52;UBERON:0007135!1.90e-23!52;UBERON:0000955!2.85e-22!50;UBERON:0006238!2.85e-22!50;UBERON:0002346!8.28e-22!71;UBERON:0003075!8.28e-22!71;UBERON:0007284!8.28e-22!71;UBERON:0002616!1.06e-21!49;UBERON:0000033!1.17e-21!63;UBERON:0004121!3.19e-21!102;UBERON:0000924!3.19e-21!102;UBERON:0006601!3.19e-21!102;UBERON:0002020!6.14e-19!34;UBERON:0003056!2.92e-17!49;UBERON:0003080!1.30e-16!40;UBERON:0002791!6.61e-16!29;UBERON:0003528!6.61e-16!29;UBERON:0001893!6.61e-16!29;UBERON:0002780!6.68e-16!39;UBERON:0001890!6.68e-16!39;UBERON:0006240!6.68e-16!39;UBERON:0000956!1.65e-11!21;UBERON:0001869!1.65e-11!21;UBERON:0000203!1.65e-11!21;UBERON:0007811!1.79e-11!86;UBERON:0000153!8.82e-11!94;UBERON:0002619!1.93e-09!17;UBERON:0000025!5.63e-08!114;UBERON:0003076!1.58e-07!12;UBERON:0003057!1.58e-07!12;UBERON:0002021!3.08e-07!10;UBERON:0000411!3.08e-07!10;UBERON:0001950!3.08e-07!10;UBERON:0004111!3.08e-07!122 | |ontology_enrichment_uberon=UBERON:0000073!1.29e-25!75;UBERON:0001016!1.29e-25!75;UBERON:0001017!2.20e-25!73;UBERON:0005743!2.20e-25!73;UBERON:0001049!1.90e-23!52;UBERON:0005068!1.90e-23!52;UBERON:0006241!1.90e-23!52;UBERON:0007135!1.90e-23!52;UBERON:0000955!2.85e-22!50;UBERON:0006238!2.85e-22!50;UBERON:0002346!8.28e-22!71;UBERON:0003075!8.28e-22!71;UBERON:0007284!8.28e-22!71;UBERON:0002616!1.06e-21!49;UBERON:0000033!1.17e-21!63;UBERON:0004121!3.19e-21!102;UBERON:0000924!3.19e-21!102;UBERON:0006601!3.19e-21!102;UBERON:0002020!6.14e-19!34;UBERON:0003056!2.92e-17!49;UBERON:0003080!1.30e-16!40;UBERON:0002791!6.61e-16!29;UBERON:0003528!6.61e-16!29;UBERON:0001893!6.61e-16!29;UBERON:0002780!6.68e-16!39;UBERON:0001890!6.68e-16!39;UBERON:0006240!6.68e-16!39;UBERON:0000956!1.65e-11!21;UBERON:0001869!1.65e-11!21;UBERON:0000203!1.65e-11!21;UBERON:0007811!1.79e-11!86;UBERON:0000153!8.82e-11!94;UBERON:0002619!1.93e-09!17;UBERON:0000025!5.63e-08!114;UBERON:0003076!1.58e-07!12;UBERON:0003057!1.58e-07!12;UBERON:0002021!3.08e-07!10;UBERON:0000411!3.08e-07!10;UBERON:0001950!3.08e-07!10;UBERON:0004111!3.08e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.59e-29,54;UBERON:0001016,5.39e-28,75;UBERON:0001017,1.17e-27,73;UBERON:0001049,5.23e-27,52;UBERON:0005068,5.23e-27,52;UBERON:0006241,5.23e-27,52;UBERON:0007135,5.23e-27,52;UBERON:0002346,1.94e-24,64;UBERON:0003075,1.94e-24,64;UBERON:0007284,1.94e-24,64;UBERON:0002020,7.91e-24,34;UBERON:0000955,1.14e-22,47;UBERON:0006238,1.14e-22,47;UBERON:0004121,4.08e-22,95;UBERON:0000924,4.08e-22,95;UBERON:0006601,4.08e-22,95;UBERON:0002616,5.99e-22,46;UBERON:0010371,2.27e-20,73;UBERON:0003528,8.56e-20,29;UBERON:0002791,8.56e-20,29;UBERON:0001893,8.56e-20,29;UBERON:0003080,6.34e-19,40;UBERON:0002780,5.20e-18,39;UBERON:0001890,5.20e-18,39;UBERON:0006240,5.20e-18,39;UBERON:0010314,7.50e-18,92;UBERON:0003056,1.07e-17,49;UBERON:0000956,6.02e-14,21;UBERON:0001869,6.02e-14,21;UBERON:0000203,6.02e-14,21;UBERON:0002619,3.35e-11,17;UBERON:0002021,3.78e-09,10;UBERON:0000411,3.78e-09,10;UBERON:0001950,3.78e-09,10;UBERON:0003076,1.21e-08,12;UBERON:0003057,1.21e-08,12;UBERON:0002420,4.75e-07,8;UBERON:0007245,4.75e-07,8;UBERON:0010009,4.75e-07,8;UBERON:0010011,4.75e-07,8;UBERON:0000454,4.75e-07,8;UBERON:0000025,6.68e-07,114 | |||
|phase1_expression=1.28119077683835,0.348975407639361,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0.699561878128147,0,0.137114433605739,0,19.6450000248971,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.811015449756117,0.183546752161682,2.34717403304412,0.872100625521786,0.878744730937887,1.94429899074283,4.89952475688769,0,0,0,0,0.771778308107841,0,0,16.7922662513466,16.398720357433,17.1134478946668,0.338844532069132,2.66788438833342,0.449949858640699,0.988866362566974,0.7104801149461,1.19840044207362,1.53687322128622,26.5445407509703,27.1361936046698,22.9254207873006,75.9831618514118,81.9422286930486,17.8836566853833,12.0765293482978,21.1420320920305,118.92515147934,131.262583551573,133.330470866419,16.7495585417346,16.1018252740241,11.9810075228055,147.687806471731,75.4101897442451,88.6229837105499,70.7108605136802,70.6163536763551,29.4511124403975,1.06016670666458,1.66257432234928,0,0,0,0,0,0,4.77511028447956,4.4311883870295,3.89679006904303,4.94675404314476,1.83096445709685,1.28326477414318,5.09610479413291,7.11066703153331,0,0,0,3.31133251185274,0.258937883647172,0.445326417194474,0.693941307064543,0,0.922461989024234,0.452167921657868,0.117588707135705,0.251333182659351,0.494389935468748,0.433798070759735,0,0.323533699894818,0.883366073841574,1.45462575940567,1.86391761218122,96.6176630138106,100.115525856832,0,0,0,0,160.725356081375,42.0900554593136,45.2355667606312,75.7874036038325,88.221832778964,98.4915331212315,81.2828727969466,0.611036183101898,0.248813941220186,0,3.15662783829711,0.390361328888111,0.919608417733892,0.360124259610698,0.90422890701429,2.10913147369116,2.94661556655154,3.37326208415024,10.0894314588216,0,0.378212160335639,0.879755620819744,1.09597866213787,0.278047249225598,0.696504333044333,0.61734640922383,0,0,0,0,2.48550927042602,1.64168241986767,1.98068267607116,2.3674473558521,1.96764231747404,2.62254091908543,2.32533944750408,1.87791380979733,1.63471479314037,0.987359099480883,0.32833492815819,0.648550476366846,0.146199987425332,0.878200461164203,0.536825675041487,46.6843685812362,34.7817589841981,0,0,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0.316182685621286,0,0.31399745568275,0.123397163921801,0,0.667380422864376,0.786235980452812,0.674586337154561,0.608580364165509,0.241177159752417,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0,0.551873492609465,162.798298247621,157.766930153105,2.95082901678016,0.252470927204373,0.94652465824877,0.780877488593277,2.36965737506079,0,0.891194696329576,1.41538265394416,0,0.584511715822624,0.790575555893047,28.5975971615408,0.283880170416537,1.24645922567079,0.488660878060728,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.614870295887855,0,0,0,0.316036757935816,0,0,0.340439605753788,1.08036656418786,0.258717367565509,0.428674070063185,0.886701168211368,1.24858172321449,2.79733335023606,1.2178597964584,0.938686832254841,2.96564899209348,0.220528398054962,0.49465875882444,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0,188.206681540667,0.341741761595705,0,0,0.565105371014073,0,0.228778173206523,0,0,0.276399947608848,0,0.632671987162271,0.406638934253697,0.216010681643603,0,0.218362563746178,0.404593039154462,0.330613822901344,1.04702376793612,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0,0,0,0.234714477291508,0.5208175393758,0.524296722128554,0.724752362478018,2.01621004380506,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0,0.302899349844443,0.228620419965,0,0.292373642219257,0.384847366561318,0.233753804363138,0.226730383615211,0,2.06341870201794,0.335769232728157,0.386379188064381,0.375364950902364,0.73260649706906,0.428736758158132,0,88.1012874482624,79.1759406792344,95.6735507443792,85.9265911718438,71.2485820561468,61.1869056885657,54.0018000185445,49.9856535578885,63.4399372577886,74.5574848922621,0.830298780673413,0,1.87806966329548,2.18796045361465,5.8691685535835,7.53758384645058,6.88964856185007,5.56294654545014,6.09746498224449,4.80124702351215,6.33698249725599,6.79054828989874,5.61849044819294,6.21043978327232,6.54764346093991,4.28664322154766,5.79421629724277,5.40145817298374,7.41754621445952,4.41596760403192,2.74295401908332,3.01708870470874,3.81497903915713,4.36039249896986,5.92889096616583,5.24610568928394,6.95126296916536,4.47218509444333,7.06181391998481,2.24456908663095,6.4062909787054,6.99381824866501,4.50154147486658,6.50734732981057,5.01557188550968,9.74261253957989,6.31615342802603,4.94203424311086,1.72159498861959,3.08827986767322,3.94175320554716 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716 | ||
|short_description=p1@Bend6 | |short_description=p1@Bend6 | ||
}} | }} |
Latest revision as of 01:45, 27 September 2015
Short description: | p1@Bend6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bend6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000115161, ENSMUST00000129464, ENSMUST00000171943_5end |
EntrezGene: | Bend6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.00e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.00e-17 | 23 |
neuron | 8.95e-12 | 33 |
neuronal stem cell | 8.95e-12 | 33 |
neuroblast | 8.95e-12 | 33 |
electrically signaling cell | 8.95e-12 | 33 |
ectodermal cell | 1.59e-11 | 44 |
neurectodermal cell | 1.59e-11 | 44 |
neural cell | 2.44e-11 | 43 |
electrically responsive cell | 4.71e-09 | 39 |
electrically active cell | 4.71e-09 | 39 |