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FFCP PHASE1:Mm9::chr19:38339251..38339321,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56839
|EntrezGene=56839
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9JIA1
|UniProt=Q9JIA1
|association_with_transcript=0bp_to_ENSMUST00000087252,ENSMUST00000134832,NM_020278,uc008hji.1,uc008hjj.1,uc008hjk.1_5end
|association_with_transcript=0bp_to_ENSMUST00000087252,ENSMUST00000134832,NM_020278,uc008hji.1,uc008hjj.1,uc008hjk.1_5end
|cluster_id=chr19:38339251..38339321,+
|description=CAGE_peak_1_at_Lgi1_5end
|description=CAGE_peak_1_at_Lgi1_5end
|id=chr19:38339251..38339321,+
|id=chr19:38339251..38339321,+
|ontology_enrichment_celltype=CL:0000117!4.02e-09!23;CL:0000337!4.02e-09!23
|ontology_enrichment_celltype=CL:0000117!4.02e-09!23;CL:0000337!4.02e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.18e-10,23;CL:0000337,9.18e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.74e-21!71;UBERON:0003075!1.74e-21!71;UBERON:0007284!1.74e-21!71;UBERON:0000033!9.52e-21!63;UBERON:0004121!1.04e-18!102;UBERON:0000924!1.04e-18!102;UBERON:0006601!1.04e-18!102;UBERON:0001049!3.17e-18!52;UBERON:0005068!3.17e-18!52;UBERON:0006241!3.17e-18!52;UBERON:0007135!3.17e-18!52;UBERON:0003056!2.90e-17!49;UBERON:0000955!3.43e-17!50;UBERON:0006238!3.43e-17!50;UBERON:0002616!1.33e-16!49;UBERON:0002020!7.87e-15!34;UBERON:0000073!1.70e-14!75;UBERON:0001016!1.70e-14!75;UBERON:0001017!2.64e-14!73;UBERON:0005743!2.64e-14!73;UBERON:0003080!7.15e-14!40;UBERON:0002780!2.95e-13!39;UBERON:0001890!2.95e-13!39;UBERON:0006240!2.95e-13!39;UBERON:0002791!3.96e-12!29;UBERON:0003528!3.96e-12!29;UBERON:0001893!3.96e-12!29;UBERON:0007811!6.43e-11!86;UBERON:0000153!3.24e-10!94;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0002619!4.71e-08!17;UBERON:0000956!8.75e-08!21;UBERON:0001869!8.75e-08!21;UBERON:0000203!8.75e-08!21
|ontology_enrichment_uberon=UBERON:0002346!1.74e-21!71;UBERON:0003075!1.74e-21!71;UBERON:0007284!1.74e-21!71;UBERON:0000033!9.52e-21!63;UBERON:0004121!1.04e-18!102;UBERON:0000924!1.04e-18!102;UBERON:0006601!1.04e-18!102;UBERON:0001049!3.17e-18!52;UBERON:0005068!3.17e-18!52;UBERON:0006241!3.17e-18!52;UBERON:0007135!3.17e-18!52;UBERON:0003056!2.90e-17!49;UBERON:0000955!3.43e-17!50;UBERON:0006238!3.43e-17!50;UBERON:0002616!1.33e-16!49;UBERON:0002020!7.87e-15!34;UBERON:0000073!1.70e-14!75;UBERON:0001016!1.70e-14!75;UBERON:0001017!2.64e-14!73;UBERON:0005743!2.64e-14!73;UBERON:0003080!7.15e-14!40;UBERON:0002780!2.95e-13!39;UBERON:0001890!2.95e-13!39;UBERON:0006240!2.95e-13!39;UBERON:0002791!3.96e-12!29;UBERON:0003528!3.96e-12!29;UBERON:0001893!3.96e-12!29;UBERON:0007811!6.43e-11!86;UBERON:0000153!3.24e-10!94;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0002619!4.71e-08!17;UBERON:0000956!8.75e-08!21;UBERON:0001869!8.75e-08!21;UBERON:0000203!8.75e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.77e-23,64;UBERON:0003075,5.77e-23,64;UBERON:0007284,5.77e-23,64;UBERON:0000073,7.91e-22,54;UBERON:0001049,2.67e-20,52;UBERON:0005068,2.67e-20,52;UBERON:0006241,2.67e-20,52;UBERON:0007135,2.67e-20,52;UBERON:0010371,1.23e-19,73;UBERON:0003056,2.05e-18,49;UBERON:0004121,4.83e-18,95;UBERON:0000924,4.83e-18,95;UBERON:0006601,4.83e-18,95;UBERON:0001017,9.74e-18,73;UBERON:0010314,1.10e-17,92;UBERON:0002020,4.50e-17,34;UBERON:0001016,8.68e-17,75;UBERON:0000955,1.09e-16,47;UBERON:0006238,1.09e-16,47;UBERON:0002616,5.76e-16,46;UBERON:0003080,4.82e-14,40;UBERON:0003528,1.50e-13,29;UBERON:0002791,1.50e-13,29;UBERON:0001893,1.50e-13,29;UBERON:0002780,2.77e-13,39;UBERON:0001890,2.77e-13,39;UBERON:0006240,2.77e-13,39;UBERON:0002021,5.29e-11,10;UBERON:0000411,5.29e-11,10;UBERON:0001950,5.29e-11,10;UBERON:0002619,2.02e-08,17;UBERON:0000956,5.44e-08,21;UBERON:0001869,5.44e-08,21;UBERON:0000203,5.44e-08,21;UBERON:0002420,2.32e-07,8;UBERON:0007245,2.32e-07,8;UBERON:0010009,2.32e-07,8;UBERON:0010011,2.32e-07,8;UBERON:0000454,2.32e-07,8;UBERON:0003076,3.89e-07,12;UBERON:0003057,3.89e-07,12
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84450217571126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,1.90149421051854,0.338844532069132,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0,2.57085885963423,6.40518768759679,1.22490799214954,0.958454710182364,0.919218786610021,7.70811166995721,18.386976684267,18.4327839907492,3.29715719325485,3.7509933876988,5.73004707612436,13.6799669510677,14.069065250792,19.4053774676549,11.490514833473,17.2269733766915,7.08317894136142,0.605809546665472,0.982430281388212,0,0,0,0,0,0,2.66844398250329,0,0,0,2.39433813620357,0,0,0,0,0,0,1.1418387971906,0,1.33597925158342,2.25530924795977,2.43572382649713,1.84492397804847,1.65794904607885,2.58695155698551,0.376999773989026,0,0.722996784599558,0,1.13236794963186,0.220841518460394,0,0,33.9625724533395,43.3554683103852,0,0,0,0,29.6585466021549,37.0575488283087,7.28795242254614,62.4029309490273,58.3031242713154,22.648896856992,29.3656686152641,1.62942982160506,0.248813941220186,0,1.47309299120532,3.12289063110489,2.5289231487682,3.06105620669094,2.56198190320716,2.4493139694478,1.7935920839879,1.78033276663485,2.58703370739016,0,0.189106080167819,0.351902248327898,1.97276159184817,0,1.74126083261083,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,1.02339991197733,0.658650345873152,0.805238512562231,49.8387178096982,5.45394445610208,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.974820435595601,0,0,0,0.189667900953082,1.25673363870702,2.25415471346161,1.22190796707189,1.16371492300575,0.98190147846446,0.505892296994058,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0,0.983528546038072,0,31.9495674075706,30.006191767604,0,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,9.96096080907602,0.283880170416537,1.95872164033981,3.90928702448583,2.3095817216155,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,2.04263763452273,0.36012218806262,0.129358683782755,1.07168517515796,1.24138163549592,0.356737635204141,0.493647061806363,1.2178597964584,0.23467170806371,0,0.882113592219848,0.49465875882444,0.484393280087717,0.120625849856312,0.119372344003136,0.164140899745061,0,31.1514507377656,0.170870880797853,0.82554747185289,1.11116716421827,0.188368457004691,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.756037385752609,0.836353184057875,0,0.404593039154462,0.991841468704031,0.26175594198403,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0.194451188344048,0.516639293910924,0.337912250981556,0.704143431874524,0.13020438484395,0,0,0,0,0.405450430580328,0.513554785824136,0,0.358053391334963,0,0,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,1.50471631210609,35.5793660848752,51.0961012522966,41.2484769676366,44.6818274093588,65.082839378211,61.1869056885657,60.0770025206307,49.9856535578885,45.3142408984205,37.7965027578829,0,0.798049746802062,2.56100408631201,2.18796045361465,2.30574478890781,1.2869045591501,3.33370091702423,3.5025959730612,2.24643446714271,3.53776096469316,3.29523089857312,3.77252682772152,2.71560371662659,2.04880487695582,2.01024141344646,2.85776214769844,2.0859178670074,2.31491064556446,1.64834360321323,1.61918812147837,3.42869252385415,1.06485483695602,1.43061713968393,3.0522747492789,2.54095327121393,1.4384483341585,2.37806364734604,1.05227884575137,2.98769050460896,1.68342681497322,2.25406534435931,0.985044823755635,1.63692417267876,1.39443157067369,2.12197272079256,1.99848462350357,1.87145286756327,2.36358159453128,3.63447830930802,2.20591419119516,2.08681052058379
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84450217571126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,4.85559506063035,4.7609188134483,1.90149421051854,0.338844532069132,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0,2.57085885963423,6.40518768759679,1.22490799214954,0.958454710182364,0.919218786610021,7.70811166995721,18.386976684267,18.4327839907492,3.29715719325485,3.7509933876988,5.73004707612436,13.6799669510677,14.069065250792,19.4053774676549,11.490514833473,17.2269733766915,7.08317894136142,0.605809546665472,0.982430281388212,0,0,0,0,0,0,2.66844398250329,0,0,0,2.39433813620357,0,0,0,0,0,0,1.1418387971906,0,1.33597925158342,2.25530924795977,2.43572382649713,1.84492397804847,1.65794904607885,2.58695155698551,0.376999773989026,0,0.722996784599558,0,1.13236794963186,0.220841518460394,0,0,33.9625724533395,43.3554683103852,0,0,0,0,29.6585466021549,37.0575488283087,7.28795242254614,62.4029309490273,58.3031242713154,22.648896856992,29.3656686152641,1.62942982160506,0.248813941220186,0,1.47309299120532,3.12289063110489,2.5289231487682,3.06105620669094,2.56198190320716,2.4493139694478,1.7935920839879,1.78033276663485,2.58703370739016,0,0.189106080167819,0.351902248327898,1.97276159184817,0,1.74126083261083,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,1.02339991197733,0.658650345873152,0.805238512562231,49.8387178096982,5.45394445610208,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.974820435595601,0,0,0,0.189667900953082,1.25673363870702,2.25415471346161,1.22190796707189,1.16371492300575,0.98190147846446,0.505892296994058,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0.325929952884052,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,0,0,0.983528546038072,0,31.9495674075706,30.006191767604,0,1.26235463602186,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,9.96096080907602,0.283880170416537,1.95872164033981,3.90928702448583,2.3095817216155,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,2.04263763452273,0.36012218806262,0.129358683782755,1.07168517515796,1.24138163549592,0.356737635204141,0.493647061806363,1.2178597964584,0.23467170806371,0,0.882113592219848,0.49465875882444,0.484393280087717,0.120625849856312,0.119372344003136,0.164140899745061,0,31.1514507377656,0.170870880797853,0.82554747185289,1.11116716421827,0.188368457004691,0.27338845544205,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.756037385752609,0.836353184057875,0,0.404593039154462,0.991841468704031,0.26175594198403,0.129614973291793,0,0,1.34564891439581,0.66183396182839,0.194451188344048,0.516639293910924,0.337912250981556,0.704143431874524,0.13020438484395,0,0,0,0,0.405450430580328,0.513554785824136,0,0.358053391334963,0,0,0.147689527174577,0.201932899896295,0.15241361331,0.302478555410522,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,1.50471631210609,35.5793660848752,51.0961012522966,41.2484769676366,44.6818274093588,65.082839378211,61.1869056885657,60.0770025206307,49.9856535578885,45.3142408984205,37.7965027578829,0,0.798049746802062,2.56100408631201,2.18796045361465,2.30574478890781,1.2869045591501,3.33370091702423,3.5025959730612,2.24643446714271,3.53776096469316,3.29523089857312,3.77252682772152,2.71560371662659,2.04880487695582,2.01024141344646,2.85776214769844,2.0859178670074,2.31491064556446,1.64834360321323,1.61918812147837,3.42869252385415,1.06485483695602,1.43061713968393,3.0522747492789,2.54095327121393,1.4384483341585,2.37806364734604,1.05227884575137,2.98769050460896,1.68342681497322,2.25406534435931,0.985044823755635,1.63692417267876,1.39443157067369,2.12197272079256,1.99848462350357,1.87145286756327,2.36358159453128,3.63447830930802,2.20591419119516,2.08681052058379
|short_description=p1@Lgi1
|short_description=p1@Lgi1
}}
}}

Latest revision as of 16:56, 25 September 2015

Short description:p1@Lgi1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lgi1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000087252, ENSMUST00000134832, NM_020278, uc008hji.1, uc008hjj.1, uc008hjk.1_5end
EntrezGene:Lgi1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lgi1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B233.96
cerebellum, neonate N30.CNhs11135.1395-42I243.36
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A429.66
corpus striatum, adult.CNhs10487.19-21D837.06
corpus striatum, neonate N00.CNhs11226.630-43F17.29
cortex, adult.CNhs10473.12-14D562.40
cortex, neonate N30.CNhs11107.1392-42F258.30
diencephalon, adult.CNhs10482.20-12F222.65
diencephalon, neonate N30.CNhs11201.1388-42B229.37
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E849.84
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C231.95
medulla oblongata, neonate N30.CNhs11200.1396-42A330.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C931.15
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A251.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D744.68
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A465.08
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A660.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A749.99
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A845.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.80
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.18e-1023
neuroblast (sensu Vertebrata)9.18e-1023

Uber anatomy
Ontology termp-valuen
neurectoderm5.77e-2364
neural plate5.77e-2364
presumptive neural plate5.77e-2364
regional part of nervous system7.91e-2254
neural tube2.67e-2052
neural rod2.67e-2052
future spinal cord2.67e-2052
neural keel2.67e-2052
ecto-epithelium1.23e-1973
pre-chordal neural plate2.05e-1849
ectoderm-derived structure4.83e-1895
ectoderm4.83e-1895
presumptive ectoderm4.83e-1895
central nervous system9.74e-1873
structure with developmental contribution from neural crest1.10e-1792
gray matter4.50e-1734
nervous system8.68e-1775
brain1.09e-1647
future brain1.09e-1647
regional part of brain5.76e-1646
anterior neural tube4.82e-1440
brain grey matter1.50e-1329
regional part of telencephalon1.50e-1329
telencephalon1.50e-1329
regional part of forebrain2.77e-1339
forebrain2.77e-1339
future forebrain2.77e-1339
occipital lobe5.29e-1110
visual cortex5.29e-1110
neocortex5.29e-1110
regional part of cerebral cortex2.02e-0817
cerebral cortex5.44e-0821
cerebral hemisphere5.44e-0821
pallium5.44e-0821
basal ganglion2.32e-078
nuclear complex of neuraxis2.32e-078
aggregate regional part of brain2.32e-078
collection of basal ganglia2.32e-078
cerebral subcortex2.32e-078
posterior neural tube3.89e-0712
chordal neural plate3.89e-0712
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