FFCP PHASE1:Mm9::chr11:93905508..93905552,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70834 | |EntrezGene=70834 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=E9QJU2,E9PUD1,Q58A65 | |UniProt=E9QJU2,E9PUD1,Q58A65 | ||
|association_with_transcript=0bp_to_ENSMUST00000075695,ENSMUST00000092777,NM_001025428,NM_001025429,NM_001025430,NM_001199205,uc007kya.1,uc007kyb.1,uc007kyc.1,uc007kyd.1_5end | |association_with_transcript=0bp_to_ENSMUST00000075695,ENSMUST00000092777,NM_001025428,NM_001025429,NM_001025430,NM_001199205,uc007kya.1,uc007kyb.1,uc007kyc.1,uc007kyd.1_5end | ||
|cluster_id=chr11:93905508..93905552,+ | |||
|description=CAGE_peak_2_at_Spag9_5end | |description=CAGE_peak_2_at_Spag9_5end | ||
|id=chr11:93905508..93905552,+ | |id=chr11:93905508..93905552,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.46e-15!33;CL:0000047!2.46e-15!33;CL:0000031!2.46e-15!33;CL:0000404!2.46e-15!33;CL:0000117!1.28e-12!23;CL:0000337!1.28e-12!23;CL:0000221!5.72e-12!44;CL:0000133!5.72e-12!44;CL:0002319!1.24e-11!43;CL:0000393!4.60e-10!39;CL:0000211!4.60e-10!39;CL:0000055!2.49e-07!50 | |ontology_enrichment_celltype=CL:0000540!2.46e-15!33;CL:0000047!2.46e-15!33;CL:0000031!2.46e-15!33;CL:0000404!2.46e-15!33;CL:0000117!1.28e-12!23;CL:0000337!1.28e-12!23;CL:0000221!5.72e-12!44;CL:0000133!5.72e-12!44;CL:0002319!1.24e-11!43;CL:0000393!4.60e-10!39;CL:0000211!4.60e-10!39;CL:0000055!2.49e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.21e-16,33;CL:0000047,8.21e-16,33;CL:0000031,8.21e-16,33;CL:0000404,8.21e-16,33;CL:0000117,5.30e-13,23;CL:0000337,5.30e-13,23;CL:0000221,7.48e-12,44;CL:0000133,7.48e-12,44;CL:0002319,1.65e-11,43;CL:0000393,2.23e-10,39;CL:0000211,2.23e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.81e-29!73;UBERON:0005743!1.81e-29!73;UBERON:0000073!1.39e-28!75;UBERON:0001016!1.39e-28!75;UBERON:0004121!1.75e-27!102;UBERON:0000924!1.75e-27!102;UBERON:0006601!1.75e-27!102;UBERON:0002346!6.92e-26!71;UBERON:0003075!6.92e-26!71;UBERON:0007284!6.92e-26!71;UBERON:0000033!1.93e-24!63;UBERON:0001049!1.45e-22!52;UBERON:0005068!1.45e-22!52;UBERON:0006241!1.45e-22!52;UBERON:0007135!1.45e-22!52;UBERON:0000955!5.62e-22!50;UBERON:0006238!5.62e-22!50;UBERON:0002616!2.87e-21!49;UBERON:0003056!1.92e-20!49;UBERON:0003080!7.37e-18!40;UBERON:0002020!8.05e-18!34;UBERON:0002780!3.40e-17!39;UBERON:0001890!3.40e-17!39;UBERON:0006240!3.40e-17!39;UBERON:0002791!2.44e-15!29;UBERON:0003528!2.44e-15!29;UBERON:0001893!2.44e-15!29;UBERON:0000956!4.93e-11!21;UBERON:0001869!4.93e-11!21;UBERON:0000203!4.93e-11!21;UBERON:0000153!5.51e-11!94;UBERON:0007811!1.72e-10!86;UBERON:0000468!6.47e-10!333;UBERON:0002619!4.68e-09!17;UBERON:0002021!3.51e-08!10;UBERON:0000411!3.51e-08!10;UBERON:0001950!3.51e-08!10;UBERON:0000025!1.83e-07!114;UBERON:0000922!2.45e-07!328;UBERON:0004111!3.90e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!1.81e-29!73;UBERON:0005743!1.81e-29!73;UBERON:0000073!1.39e-28!75;UBERON:0001016!1.39e-28!75;UBERON:0004121!1.75e-27!102;UBERON:0000924!1.75e-27!102;UBERON:0006601!1.75e-27!102;UBERON:0002346!6.92e-26!71;UBERON:0003075!6.92e-26!71;UBERON:0007284!6.92e-26!71;UBERON:0000033!1.93e-24!63;UBERON:0001049!1.45e-22!52;UBERON:0005068!1.45e-22!52;UBERON:0006241!1.45e-22!52;UBERON:0007135!1.45e-22!52;UBERON:0000955!5.62e-22!50;UBERON:0006238!5.62e-22!50;UBERON:0002616!2.87e-21!49;UBERON:0003056!1.92e-20!49;UBERON:0003080!7.37e-18!40;UBERON:0002020!8.05e-18!34;UBERON:0002780!3.40e-17!39;UBERON:0001890!3.40e-17!39;UBERON:0006240!3.40e-17!39;UBERON:0002791!2.44e-15!29;UBERON:0003528!2.44e-15!29;UBERON:0001893!2.44e-15!29;UBERON:0000956!4.93e-11!21;UBERON:0001869!4.93e-11!21;UBERON:0000203!4.93e-11!21;UBERON:0000153!5.51e-11!94;UBERON:0007811!1.72e-10!86;UBERON:0000468!6.47e-10!333;UBERON:0002619!4.68e-09!17;UBERON:0002021!3.51e-08!10;UBERON:0000411!3.51e-08!10;UBERON:0001950!3.51e-08!10;UBERON:0000025!1.83e-07!114;UBERON:0000922!2.45e-07!328;UBERON:0004111!3.90e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.35e-30,73;UBERON:0001016,6.64e-29,75;UBERON:0004121,6.17e-28,95;UBERON:0000924,6.17e-28,95;UBERON:0006601,6.17e-28,95;UBERON:0002346,6.30e-27,64;UBERON:0003075,6.30e-27,64;UBERON:0007284,6.30e-27,64;UBERON:0010371,1.05e-24,73;UBERON:0010314,1.74e-24,92;UBERON:0000073,4.27e-24,54;UBERON:0001049,1.15e-22,52;UBERON:0005068,1.15e-22,52;UBERON:0006241,1.15e-22,52;UBERON:0007135,1.15e-22,52;UBERON:0003056,7.98e-21,49;UBERON:0000955,5.35e-20,47;UBERON:0006238,5.35e-20,47;UBERON:0002616,2.74e-19,46;UBERON:0003080,3.81e-18,40;UBERON:0002020,4.37e-18,34;UBERON:0002780,1.84e-17,39;UBERON:0001890,1.84e-17,39;UBERON:0006240,1.84e-17,39;UBERON:0003528,1.61e-15,29;UBERON:0002791,1.61e-15,29;UBERON:0001893,1.61e-15,29;UBERON:0000956,4.47e-11,21;UBERON:0001869,4.47e-11,21;UBERON:0000203,4.47e-11,21;UBERON:0002619,4.91e-09,17;UBERON:0002021,2.07e-08,10;UBERON:0000411,2.07e-08,10;UBERON:0001950,2.07e-08,10;UBERON:0000025,6.84e-07,114;UBERON:0000922,9.96e-07,320 | |||
|phase1_expression=16.4953312517938,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8796104135375,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.92445281484804,0.439372365468944,3.30530828426282,2.79972843250725,7.18762821824858,0,0,0,0.257259436035947,0.85960031981627,0,31.1567349723781,33.8554226734101,37.3960528068646,0.677689064138264,0,0,0,0,2.09720077362883,4.99483796918021,29.7589187325331,24.8410926530311,28.3938697824366,18.5673139862472,21.2033799313549,37.8496569574208,23.0029130443767,30.3342199581307,79.2834343195599,82.8690824172868,82.3331018253465,39.434000031328,36.8695203717711,39.5894161623138,36.8521558681823,62.4666497135165,63.564071075153,59.8096028511545,68.0536634219712,46.9726603479757,1.51452386666368,2.94729084416464,2.02905142091174,0,0,1.07940638327563,0.649776417447669,0,4.77511028447956,0,0,0,15.7744630149882,0,0,0,0.216491041011214,0,0,2.39786147410026,0.258937883647172,6.08612770165782,6.07198643681475,7.00270600117925,3.92046345335299,7.83757730873637,12.1116368349776,2.51333182659351,0,2.16899035379867,0,4.69123864847487,1.54589062922275,2.42437626567611,3.72783522436244,67.9251449066789,73.3063473847093,0.510914110417183,0,0,0,85.9798270183682,82.8076091101714,55.1622605775475,88.3027546576764,87.454686406973,65.8688101253805,72.8463271174232,15.0722258498468,1.24406970610093,1.76905930903572,7.36546495602659,8.97831056442656,10.8053989083732,15.1252189036493,17.6324636867787,23.4045557080568,28.953700784376,25.9553777030449,21.4723797713383,6.68260778091811,13.4265316919152,11.6127741948206,7.89104636739269,12.7901734643775,7.3132954969655,4.7329891373827,12.1410902759281,0,0,0,6.62802472113606,8.44293815931946,7.92273070428465,14.2046841351126,8.85439042863317,10.7986979021165,11.6266972375204,5.36546802799238,12.2603609485528,6.08871444679878,9.35754545250843,5.35054143002648,3.65499968563331,3.95190207523891,3.89198614405078,78.0175709172912,51.2464969648836,0.330418782983798,0.264450566663544,8.31824177087412,7.89604684325491,5.54130083685001,4.03367049246685,1.55664630691409,2.85338439168839,0.949058123089023,2.30578536613615,3.2673577144035,3.97912944082302,2.9244613067868,1.79763881730844,1.08069024937347,0.796565093017469,3.60369011810855,8.79713547094912,5.63538678365402,10.386217720111,6.40043207653165,10.4502371636575,6.70307293517127,1.32849133181642,0.941992367048249,0.863780147452604,0,0.83422552858047,0.589676985339609,0.224862112384854,0.608580364165509,0,0,0.287696137450811,0.486405680325106,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0,2.03228509183265,5.68474235311454,5.37784422258685,5.94107800213158,2.58159273117352,3.01511263395268,4.04674189506223,1.75620283072019,11.3497303756458,12.8449519996289,7.17546458958692,1.47476983244164,1.89953480052485,2.4590339958857,0,0,0,1.37968373152366,81.0780479438349,72.4368223139816,0,4.54447668967871,14.1978698737316,19.1314984705353,21.7577631710127,11.709471099675,13.3679204449436,11.6061377623421,13.3587531552715,15.4895604692995,22.5314033429518,87.0780767503097,9.36804562374573,6.41036173202119,11.8907480328111,8.57844639457184,0,6.5550771761845,4.83717691143602,4.14931175462976,0.885905678642318,3.99665692327106,6.20227903603731,3.99887102425256,2.49548164869305,1.58018378967908,1.05418608574999,0,13.6175842301515,10.2634823597847,3.36332577835162,11.1455258216428,24.650292476276,15.5180871313801,14.4803138129866,5.48036908406279,0.704015124191131,0,0.882113592219848,1.15420377059036,10.172258881842,3.25689794612042,3.81991500810037,1.80554989719567,0.582961673259701,76.9515003343615,0,6.3979929068599,4.25947412950337,0.376736914009382,0.136694227721025,0,0.339956859987711,0.139951452323658,0.276399947608848,0,4.4287039101359,7.31950081656655,3.99619761040665,4.59994251231831,3.05707589244649,2.29269388854195,2.81021749466142,0.26175594198403,0.518459893167171,0.621339313086926,0,16.5963366108816,10.9202603701684,19.4451188344048,17.1782565225382,24.8365504471444,32.1558833889366,16.1453437206498,20.4475721630136,5.79801889982414,2.01621004380506,0.316011120628178,3.04087822935246,2.97861775777999,0.25984164595559,0.895133478337407,0.198681354781265,0.360586348559907,0.295379054349154,0.504832249740738,0.15241361331,0.302478555410522,0.194915761479505,0,0.116876902181569,2.49403421976732,0,0,0,1.35232715822533,2.064507229963,4.57879060668163,1.2862102744744,1.00314420807073,81.8890171794746,89.3030958823923,86.5072225293489,87.9888293599681,86.3203974911009,89.8918737893744,88.4279475303666,103.123555538346,116.910741517925,97.856698921094,9.54843597774425,17.9561193030464,16.2196925466427,12.6415492875513,8.38452650511929,10.6629234901008,11.556829845684,10.5077879191836,17.0087181083662,6.82282471762253,11.4065684950608,12.0720858487089,11.6115469262654,14.1495586814761,12.8081095771018,12.859929664643,12.7472758539341,10.6100071255038,14.0109206273124,13.9838974127677,12.343293085875,13.133209655791,13.3524266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| |phase1_expression=16.4953312517938,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8796104135375,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.92445281484804,0.439372365468944,3.30530828426282,2.79972843250725,7.18762821824858,0,0,0,0.257259436035947,0.85960031981627,0,31.1567349723781,33.8554226734101,37.3960528068646,0.677689064138264,0,0,0,0,2.09720077362883,4.99483796918021,29.7589187325331,24.8410926530311,28.3938697824366,18.5673139862472,21.2033799313549,37.8496569574208,23.0029130443767,30.3342199581307,79.2834343195599,82.8690824172868,82.3331018253465,39.434000031328,36.8695203717711,39.5894161623138,36.8521558681823,62.4666497135165,63.564071075153,59.8096028511545,68.0536634219712,46.9726603479757,1.51452386666368,2.94729084416464,2.02905142091174,0,0,1.07940638327563,0.649776417447669,0,4.77511028447956,0,0,0,15.7744630149882,0,0,0,0.216491041011214,0,0,2.39786147410026,0.258937883647172,6.08612770165782,6.07198643681475,7.00270600117925,3.92046345335299,7.83757730873637,12.1116368349776,2.51333182659351,0,2.16899035379867,0,4.69123864847487,1.54589062922275,2.42437626567611,3.72783522436244,67.9251449066789,73.3063473847093,0.510914110417183,0,0,0,85.9798270183682,82.8076091101714,55.1622605775475,88.3027546576764,87.454686406973,65.8688101253805,72.8463271174232,15.0722258498468,1.24406970610093,1.76905930903572,7.36546495602659,8.97831056442656,10.8053989083732,15.1252189036493,17.6324636867787,23.4045557080568,28.953700784376,25.9553777030449,21.4723797713383,6.68260778091811,13.4265316919152,11.6127741948206,7.89104636739269,12.7901734643775,7.3132954969655,4.7329891373827,12.1410902759281,0,0,0,6.62802472113606,8.44293815931946,7.92273070428465,14.2046841351126,8.85439042863317,10.7986979021165,11.6266972375204,5.36546802799238,12.2603609485528,6.08871444679878,9.35754545250843,5.35054143002648,3.65499968563331,3.95190207523891,3.89198614405078,78.0175709172912,51.2464969648836,0.330418782983798,0.264450566663544,8.31824177087412,7.89604684325491,5.54130083685001,4.03367049246685,1.55664630691409,2.85338439168839,0.949058123089023,2.30578536613615,3.2673577144035,3.97912944082302,2.9244613067868,1.79763881730844,1.08069024937347,0.796565093017469,3.60369011810855,8.79713547094912,5.63538678365402,10.386217720111,6.40043207653165,10.4502371636575,6.70307293517127,1.32849133181642,0.941992367048249,0.863780147452604,0,0.83422552858047,0.589676985339609,0.224862112384854,0.608580364165509,0,0,0.287696137450811,0.486405680325106,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0,2.03228509183265,5.68474235311454,5.37784422258685,5.94107800213158,2.58159273117352,3.01511263395268,4.04674189506223,1.75620283072019,11.3497303756458,12.8449519996289,7.17546458958692,1.47476983244164,1.89953480052485,2.4590339958857,0,0,0,1.37968373152366,81.0780479438349,72.4368223139816,0,4.54447668967871,14.1978698737316,19.1314984705353,21.7577631710127,11.709471099675,13.3679204449436,11.6061377623421,13.3587531552715,15.4895604692995,22.5314033429518,87.0780767503097,9.36804562374573,6.41036173202119,11.8907480328111,8.57844639457184,0,6.5550771761845,4.83717691143602,4.14931175462976,0.885905678642318,3.99665692327106,6.20227903603731,3.99887102425256,2.49548164869305,1.58018378967908,1.05418608574999,0,13.6175842301515,10.2634823597847,3.36332577835162,11.1455258216428,24.650292476276,15.5180871313801,14.4803138129866,5.48036908406279,0.704015124191131,0,0.882113592219848,1.15420377059036,10.172258881842,3.25689794612042,3.81991500810037,1.80554989719567,0.582961673259701,76.9515003343615,0,6.3979929068599,4.25947412950337,0.376736914009382,0.136694227721025,0,0.339956859987711,0.139951452323658,0.276399947608848,0,4.4287039101359,7.31950081656655,3.99619761040665,4.59994251231831,3.05707589244649,2.29269388854195,2.81021749466142,0.26175594198403,0.518459893167171,0.621339313086926,0,16.5963366108816,10.9202603701684,19.4451188344048,17.1782565225382,24.8365504471444,32.1558833889366,16.1453437206498,20.4475721630136,5.79801889982414,2.01621004380506,0.316011120628178,3.04087822935246,2.97861775777999,0.25984164595559,0.895133478337407,0.198681354781265,0.360586348559907,0.295379054349154,0.504832249740738,0.15241361331,0.302478555410522,0.194915761479505,0,0.116876902181569,2.49403421976732,0,0,0,1.35232715822533,2.064507229963,4.57879060668163,1.2862102744744,1.00314420807073,81.8890171794746,89.3030958823923,86.5072225293489,87.9888293599681,86.3203974911009,89.8918737893744,88.4279475303666,103.123555538346,116.910741517925,97.856698921094,9.54843597774425,17.9561193030464,16.2196925466427,12.6415492875513,8.38452650511929,10.6629234901008,11.556829845684,10.5077879191836,17.0087181083662,6.82282471762253,11.4065684950608,12.0720858487089,11.6115469262654,14.1495586814761,12.8081095771018,12.859929664643,12.7472758539341,10.6100071255038,14.0109206273124,13.9838974127677,12.343293085875,13.133209655791,13.3524266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| ||
|short_description=p2@Spag9 | |short_description=p2@Spag9 | ||
}} | }} |
Latest revision as of 23:32, 25 September 2015
Short description: | p2@Spag9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Spag9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000075695, ENSMUST00000092777, NM_001025428, NM_001025429, NM_001025430, NM_001199205, uc007kya.1, uc007kyb.1, uc007kyc.1, uc007kyd.1_5end |
EntrezGene: | Spag9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.21e-16 | 33 |
neuronal stem cell | 8.21e-16 | 33 |
neuroblast | 8.21e-16 | 33 |
electrically signaling cell | 8.21e-16 | 33 |
CNS neuron (sensu Vertebrata) | 5.30e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.30e-13 | 23 |
ectodermal cell | 7.48e-12 | 44 |
neurectodermal cell | 7.48e-12 | 44 |
neural cell | 1.65e-11 | 43 |
electrically responsive cell | 2.23e-10 | 39 |
electrically active cell | 2.23e-10 | 39 |