FFCP PHASE1:Mm9::chr9:62659399..62659466,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14155 | |EntrezGene=14155 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z2G0 | |UniProt=Q9Z2G0 | ||
|association_with_transcript=0bp_to_ENSMUST00000034775,NM_010193,uc009qam.2_5end | |association_with_transcript=0bp_to_ENSMUST00000034775,NM_010193,uc009qam.2_5end | ||
|cluster_id=chr9:62659399..62659466,- | |||
|description=CAGE_peak_2_at_Fem1b_5end | |description=CAGE_peak_2_at_Fem1b_5end | ||
|id=chr9:62659399..62659466,- | |id=chr9:62659399..62659466,- | ||
|ontology_enrichment_celltype=CL:0000117!7.22e-14!23;CL:0000337!7.22e-14!23;CL:0000540!1.21e-08!33;CL:0000047!1.21e-08!33;CL:0000031!1.21e-08!33;CL:0000404!1.21e-08!33 | |ontology_enrichment_celltype=CL:0000117!7.22e-14!23;CL:0000337!7.22e-14!23;CL:0000540!1.21e-08!33;CL:0000047!1.21e-08!33;CL:0000031!1.21e-08!33;CL:0000404!1.21e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.22e-14,23;CL:0000337,7.22e-14,23;CL:0000540,1.21e-08,33;CL:0000047,1.21e-08,33;CL:0000031,1.21e-08,33;CL:0000404,1.21e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.87e-18!52;UBERON:0005068!5.87e-18!52;UBERON:0006241!5.87e-18!52;UBERON:0007135!5.87e-18!52;UBERON:0000033!2.54e-17!63;UBERON:0002346!5.94e-17!71;UBERON:0003075!5.94e-17!71;UBERON:0007284!5.94e-17!71;UBERON:0000955!1.29e-16!50;UBERON:0006238!1.29e-16!50;UBERON:0003056!2.24e-16!49;UBERON:0002616!4.67e-16!49;UBERON:0002020!6.90e-15!34;UBERON:0001017!1.04e-14!73;UBERON:0005743!1.04e-14!73;UBERON:0003080!3.63e-14!40;UBERON:0000073!5.14e-14!75;UBERON:0001016!5.14e-14!75;UBERON:0004121!8.03e-14!102;UBERON:0000924!8.03e-14!102;UBERON:0006601!8.03e-14!102;UBERON:0002780!1.39e-13!39;UBERON:0001890!1.39e-13!39;UBERON:0006240!1.39e-13!39;UBERON:0002791!5.92e-12!29;UBERON:0003528!5.92e-12!29;UBERON:0001893!5.92e-12!29;UBERON:0007811!1.84e-11!86;UBERON:0000153!4.16e-10!94;UBERON:0000956!1.43e-07!21;UBERON:0001869!1.43e-07!21;UBERON:0000203!1.43e-07!21 | |ontology_enrichment_uberon=UBERON:0001049!5.87e-18!52;UBERON:0005068!5.87e-18!52;UBERON:0006241!5.87e-18!52;UBERON:0007135!5.87e-18!52;UBERON:0000033!2.54e-17!63;UBERON:0002346!5.94e-17!71;UBERON:0003075!5.94e-17!71;UBERON:0007284!5.94e-17!71;UBERON:0000955!1.29e-16!50;UBERON:0006238!1.29e-16!50;UBERON:0003056!2.24e-16!49;UBERON:0002616!4.67e-16!49;UBERON:0002020!6.90e-15!34;UBERON:0001017!1.04e-14!73;UBERON:0005743!1.04e-14!73;UBERON:0003080!3.63e-14!40;UBERON:0000073!5.14e-14!75;UBERON:0001016!5.14e-14!75;UBERON:0004121!8.03e-14!102;UBERON:0000924!8.03e-14!102;UBERON:0006601!8.03e-14!102;UBERON:0002780!1.39e-13!39;UBERON:0001890!1.39e-13!39;UBERON:0006240!1.39e-13!39;UBERON:0002791!5.92e-12!29;UBERON:0003528!5.92e-12!29;UBERON:0001893!5.92e-12!29;UBERON:0007811!1.84e-11!86;UBERON:0000153!4.16e-10!94;UBERON:0000956!1.43e-07!21;UBERON:0001869!1.43e-07!21;UBERON:0000203!1.43e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.50e-19,54;UBERON:0002346,1.16e-18,64;UBERON:0003075,1.16e-18,64;UBERON:0007284,1.16e-18,64;UBERON:0001049,5.87e-18,52;UBERON:0005068,5.87e-18,52;UBERON:0006241,5.87e-18,52;UBERON:0007135,5.87e-18,52;UBERON:0010371,7.61e-17,73;UBERON:0003056,2.24e-16,49;UBERON:0000955,4.35e-15,47;UBERON:0006238,4.35e-15,47;UBERON:0002020,6.90e-15,34;UBERON:0004121,1.03e-14,95;UBERON:0000924,1.03e-14,95;UBERON:0006601,1.03e-14,95;UBERON:0001017,1.04e-14,73;UBERON:0002616,1.53e-14,46;UBERON:0003080,3.63e-14,40;UBERON:0001016,5.19e-14,75;UBERON:0002780,1.39e-13,39;UBERON:0001890,1.39e-13,39;UBERON:0006240,1.39e-13,39;UBERON:0003528,5.92e-12,29;UBERON:0002791,5.92e-12,29;UBERON:0001893,5.92e-12,29;UBERON:0010314,2.28e-10,92;UBERON:0000956,1.42e-07,21;UBERON:0001869,1.42e-07,21;UBERON:0000203,1.42e-07,21 | |||
|phase1_expression=7.20669811971573,6.2815573375085,8.18998630901165,5.14189159221611,6.51164448930251,6.5472916045637,5.13947809310157,7.87652272993615,6.75785866328,7.0219357896598,2.39705155515707,2.39316476986009,2.05440875917447,5.15780374272085,5.3297561890506,6.2767332890846,6.99561878128147,5.67831897644828,6.30726394586398,5.51706547337439,62.6769048413384,5.65958421845046,4.17919662622297,4.15980299262857,4.81759490241057,2.8711598205751,7.75371593086335,4.74036711908956,3.80046838912748,7.81293402255785,4.43461021310609,5.71527606113668,6.1506478758457,0,3.46621943701529,4.65457007003779,5.10423390655923,7.95210098400125,7.0320181007142,5.75876118371178,8.2352408324342,6.14740936462601,6.79714494243615,2.26614272356039,2.73717714292689,2.20256102594018,2.34717403304412,5.88667922227206,3.73466510648602,3.88859798148567,4.05960622713551,2.87505128729943,6.37573903019398,5.07753499407941,4.36921938885203,4.88792928468299,6.5902691185914,2.06268836910977,28.3243045203437,26.9785399428737,22.8179305262225,2.03306719241479,3.55717918444456,2.6996991518442,1.97773272513395,1.4209602298922,0.898800331555214,4.99483796918021,15.4497522339632,13.9056116481641,13.0401476037857,17.7103610330358,14.1355866209033,18.1286382838132,15.7186572469908,22.0612508786405,15.4162233399144,17.4931653176707,14.8998337258556,30.2019598902144,35.7716686485422,35.4221091978597,15.0758819460746,13.5063026407603,15.5854212732346,27.1058298635774,24.6303007782448,27.5871179821445,5.52801211332244,6.19686792875641,8.11620568364698,6.0229671388697,3.39985666853875,4.31762553310254,3.89865850468601,2.24013443548668,11.3759980306719,3.91989741929533,4.1565760736459,2.47337702157238,7.46470124816407,5.13305909657271,5.09610479413291,7.11066703153331,1.73192832808971,1.52015919285059,2.02209778005913,13.7020655662872,4.66088190564909,4.60170631100957,7.45986905094384,7.00270600117925,7.37969591219387,6.0289056221049,6.46737889246376,7.53999547978053,11.8653584512499,5.06097749219691,12.3845477272982,7.44127509758082,6.18356251689102,4.84875253135222,1.86391761218122,18.4451902117275,19.0596503200244,5.8755122697976,9.94465533399138,7.19883277192089,9.14905634926066,19.7723644014366,21.5025283324754,22.4921290282027,16.8609590586508,16.8772201838018,19.7398642331582,16.061885043708,5.09196819251581,5.349499736234,3.0326731012041,4.62972082950243,9.23855145035196,11.0353010128067,14.7650946440386,12.6592046982001,16.2607232971674,15.373646434182,17.5222224926693,8.53721123438752,7.76044774558232,6.80781888604149,7.5658983390498,6.1374805079721,5.28289773528636,7.66154766348766,4.11564272815887,4.37875387000685,8.42655824775882,7.72043721344146,10.5140494776369,6.42089894860056,7.03578179943289,5.58192390529146,4.97163944728941,6.88674811115913,6.47921874126989,5.34828072925938,5.90201483079162,4.55384835231961,5.26591519723137,6.7308660272429,8.02581214503972,5.99419948443863,3.73235195994786,4.96563749413376,13.0379768109759,16.0531195311684,6.27795687669216,2.90895623329899,7.46508876873319,5.10920678092965,5.02583099156164,8.67239155880373,6.22658522765637,3.23383564391351,7.11793592316767,7.74085087202851,8.54539709920916,6.16765063327568,6.23885078781184,8.98819408654222,4.75503709724327,6.77080329064848,7.01771233526402,8.11164439529075,6.76246414038483,7.94240178596726,8.33995694820791,6.66290288958026,10.6869747739995,8.70899873079653,10.047918581848,5.92306386824642,4.74324203339438,6.50695912292767,8.64859578498093,11.0182435068578,9.53442570525964,11.3353265083636,5.0925170356284,5.75392274901621,3.40483976227574,3.56929837144506,11.5014565221884,7.81495990103857,4.99260276983297,5.80931419278357,5.38192240565737,4.82443521363367,10.3461786493299,7.57965647081939,5.21487924614483,7.97801903143384,6.57132695207806,6.03022526790537,6.18913466303636,10.1469496886055,8.51229778173431,7.75126413770712,12.5969267239415,7.53771247692395,8.28887912956299,8.82359257347221,6.03165135757089,4.89515115436839,6.39293554924747,8.00216564283724,13.0045977890111,15.2375192569864,1.96721934452011,5.30188947129183,5.99465616890888,2.73307121007647,7.10897212518236,3.58453196928828,5.56996685205985,6.22768367735431,5.26253912177363,9.64444331107329,7.11518000303742,17.0300297703558,5.96148357874728,6.7664929393557,4.88660878060728,4.78413356620353,0,4.61283208694465,6.65111825322452,6.60117779145643,3.83892460745005,6.7635732547664,5.94385074286909,4.72593848320757,7.48644494607915,4.10847785316561,6.32511651449993,5.15677716240934,10.2131881726136,7.38250485528372,6.72665155670323,8.3591443662321,8.86701168211368,11.2372355089304,10.0374902567294,7.91608867697958,7.04015124191131,11.0152676849186,3.52845436887939,6.10079135883476,5.32832608096488,7.35817684123501,8.59480876822583,4.92422699235184,5.82961673259701,13.9068976507882,7.51831875510552,8.46186158649212,7.40778109478847,8.85331747922048,10.66214976224,8.46479240864134,20.5673900292565,14.4149995893368,20.5917960968591,2.86401185404534,6.80122386199441,6.09958401380546,7.4523685167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|phase1_expression=7.20669811971573,6.2815573375085,8.18998630901165,5.14189159221611,6.51164448930251,6.5472916045637,5.13947809310157,7.87652272993615,6.75785866328,7.0219357896598,2.39705155515707,2.39316476986009,2.05440875917447,5.15780374272085,5.3297561890506,6.2767332890846,6.99561878128147,5.67831897644828,6.30726394586398,5.51706547337439,62.6769048413384,5.65958421845046,4.17919662622297,4.15980299262857,4.81759490241057,2.8711598205751,7.75371593086335,4.74036711908956,3.80046838912748,7.81293402255785,4.43461021310609,5.71527606113668,6.1506478758457,0,3.46621943701529,4.65457007003779,5.10423390655923,7.95210098400125,7.0320181007142,5.75876118371178,8.2352408324342,6.14740936462601,6.79714494243615,2.26614272356039,2.73717714292689,2.20256102594018,2.34717403304412,5.88667922227206,3.73466510648602,3.88859798148567,4.05960622713551,2.87505128729943,6.37573903019398,5.07753499407941,4.36921938885203,4.88792928468299,6.5902691185914,2.06268836910977,28.3243045203437,26.9785399428737,22.8179305262225,2.03306719241479,3.55717918444456,2.6996991518442,1.97773272513395,1.4209602298922,0.898800331555214,4.99483796918021,15.4497522339632,13.9056116481641,13.0401476037857,17.7103610330358,14.1355866209033,18.1286382838132,15.7186572469908,22.0612508786405,15.4162233399144,17.4931653176707,14.8998337258556,30.2019598902144,35.7716686485422,35.4221091978597,15.0758819460746,13.5063026407603,15.5854212732346,27.1058298635774,24.6303007782448,27.5871179821445,5.52801211332244,6.19686792875641,8.11620568364698,6.0229671388697,3.39985666853875,4.31762553310254,3.89865850468601,2.24013443548668,11.3759980306719,3.91989741929533,4.1565760736459,2.47337702157238,7.46470124816407,5.13305909657271,5.09610479413291,7.11066703153331,1.73192832808971,1.52015919285059,2.02209778005913,13.7020655662872,4.66088190564909,4.60170631100957,7.45986905094384,7.00270600117925,7.37969591219387,6.0289056221049,6.46737889246376,7.53999547978053,11.8653584512499,5.06097749219691,12.3845477272982,7.44127509758082,6.18356251689102,4.84875253135222,1.86391761218122,18.4451902117275,19.0596503200244,5.8755122697976,9.94465533399138,7.19883277192089,9.14905634926066,19.7723644014366,21.5025283324754,22.4921290282027,16.8609590586508,16.8772201838018,19.7398642331582,16.061885043708,5.09196819251581,5.349499736234,3.0326731012041,4.62972082950243,9.23855145035196,11.0353010128067,14.7650946440386,12.6592046982001,16.2607232971674,15.373646434182,17.5222224926693,8.53721123438752,7.76044774558232,6.80781888604149,7.5658983390498,6.1374805079721,5.28289773528636,7.66154766348766,4.11564272815887,4.37875387000685,8.42655824775882,7.72043721344146,10.5140494776369,6.42089894860056,7.03578179943289,5.58192390529146,4.97163944728941,6.88674811115913,6.47921874126989,5.34828072925938,5.90201483079162,4.55384835231961,5.26591519723137,6.7308660272429,8.02581214503972,5.99419948443863,3.73235195994786,4.96563749413376,13.0379768109759,16.0531195311684,6.27795687669216,2.90895623329899,7.46508876873319,5.10920678092965,5.02583099156164,8.67239155880373,6.22658522765637,3.23383564391351,7.11793592316767,7.74085087202851,8.54539709920916,6.16765063327568,6.23885078781184,8.98819408654222,4.75503709724327,6.77080329064848,7.01771233526402,8.11164439529075,6.76246414038483,7.94240178596726,8.33995694820791,6.66290288958026,10.6869747739995,8.70899873079653,10.047918581848,5.92306386824642,4.74324203339438,6.50695912292767,8.64859578498093,11.0182435068578,9.53442570525964,11.3353265083636,5.0925170356284,5.75392274901621,3.40483976227574,3.56929837144506,11.5014565221884,7.81495990103857,4.99260276983297,5.80931419278357,5.38192240565737,4.82443521363367,10.3461786493299,7.57965647081939,5.21487924614483,7.97801903143384,6.57132695207806,6.03022526790537,6.18913466303636,10.1469496886055,8.51229778173431,7.75126413770712,12.5969267239415,7.53771247692395,8.28887912956299,8.82359257347221,6.03165135757089,4.89515115436839,6.39293554924747,8.00216564283724,13.0045977890111,15.2375192569864,1.96721934452011,5.30188947129183,5.99465616890888,2.73307121007647,7.10897212518236,3.58453196928828,5.56996685205985,6.22768367735431,5.26253912177363,9.64444331107329,7.11518000303742,17.0300297703558,5.96148357874728,6.7664929393557,4.88660878060728,4.78413356620353,0,4.61283208694465,6.65111825322452,6.60117779145643,3.83892460745005,6.7635732547664,5.94385074286909,4.72593848320757,7.48644494607915,4.10847785316561,6.32511651449993,5.15677716240934,10.2131881726136,7.38250485528372,6.72665155670323,8.3591443662321,8.86701168211368,11.2372355089304,10.0374902567294,7.91608867697958,7.04015124191131,11.0152676849186,3.52845436887939,6.10079135883476,5.32832608096488,7.35817684123501,8.59480876822583,4.92422699235184,5.82961673259701,13.9068976507882,7.51831875510552,8.46186158649212,7.40778109478847,8.85331747922048,10.66214976224,8.46479240864134,20.5673900292565,14.4149995893368,20.5917960968591,2.86401185404534,6.80122386199441,6.09958401380546,7.4523685167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| ||
|short_description=p2@Fem1b | |short_description=p2@Fem1b | ||
}} | }} |
Latest revision as of 23:31, 26 September 2015
Short description: | p2@Fem1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fem1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000034775, NM_010193, uc009qam.2_5end |
EntrezGene: | Fem1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.22e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.22e-14 | 23 |
neuron | 1.21e-08 | 33 |
neuronal stem cell | 1.21e-08 | 33 |
neuroblast | 1.21e-08 | 33 |
electrically signaling cell | 1.21e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.50e-19 | 54 |
neurectoderm | 1.16e-18 | 64 |
neural plate | 1.16e-18 | 64 |
presumptive neural plate | 1.16e-18 | 64 |
neural tube | 5.87e-18 | 52 |
neural rod | 5.87e-18 | 52 |
future spinal cord | 5.87e-18 | 52 |
neural keel | 5.87e-18 | 52 |
ecto-epithelium | 7.61e-17 | 73 |
pre-chordal neural plate | 2.24e-16 | 49 |
brain | 4.35e-15 | 47 |
future brain | 4.35e-15 | 47 |
gray matter | 6.90e-15 | 34 |
ectoderm-derived structure | 1.03e-14 | 95 |
ectoderm | 1.03e-14 | 95 |
presumptive ectoderm | 1.03e-14 | 95 |
central nervous system | 1.04e-14 | 73 |
regional part of brain | 1.53e-14 | 46 |
anterior neural tube | 3.63e-14 | 40 |
nervous system | 5.19e-14 | 75 |
regional part of forebrain | 1.39e-13 | 39 |
forebrain | 1.39e-13 | 39 |
future forebrain | 1.39e-13 | 39 |
brain grey matter | 5.92e-12 | 29 |
regional part of telencephalon | 5.92e-12 | 29 |
telencephalon | 5.92e-12 | 29 |
structure with developmental contribution from neural crest | 2.28e-10 | 92 |
cerebral cortex | 1.42e-07 | 21 |
cerebral hemisphere | 1.42e-07 | 21 |
pallium | 1.42e-07 | 21 |