FFCP PHASE1:Mm9::chr6:124691119..124691136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14790 | |EntrezGene=14790 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=O35127 | |UniProt=O35127 | ||
|association_with_transcript=-22bp_to_NM_013535,uc009drn.1,uc009drp.1_5end | |association_with_transcript=-22bp_to_NM_013535,uc009drn.1,uc009drp.1_5end | ||
|cluster_id=chr6:124691119..124691136,- | |||
|description=CAGE_peak_2_at_Grcc10_5end | |description=CAGE_peak_2_at_Grcc10_5end | ||
|id=chr6:124691119..124691136,- | |id=chr6:124691119..124691136,- | ||
|ontology_enrichment_celltype=CL:0000117!5.90e-13!23;CL:0000337!5.90e-13!23;CL:0000221!4.38e-12!44;CL:0000133!4.38e-12!44;CL:0002319!9.34e-12!43;CL:0000055!4.04e-10!50;CL:0000540!7.06e-09!33;CL:0000047!7.06e-09!33;CL:0000031!7.06e-09!33;CL:0000404!7.06e-09!33;CL:0002321!3.75e-08!70;CL:0000220!3.75e-08!70;CL:0000393!3.79e-07!39;CL:0000211!3.79e-07!39 | |ontology_enrichment_celltype=CL:0000117!5.90e-13!23;CL:0000337!5.90e-13!23;CL:0000221!4.38e-12!44;CL:0000133!4.38e-12!44;CL:0002319!9.34e-12!43;CL:0000055!4.04e-10!50;CL:0000540!7.06e-09!33;CL:0000047!7.06e-09!33;CL:0000031!7.06e-09!33;CL:0000404!7.06e-09!33;CL:0002321!3.75e-08!70;CL:0000220!3.75e-08!70;CL:0000393!3.79e-07!39;CL:0000211!3.79e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.55e-15,23;CL:0000337,1.55e-15,23;CL:0000221,3.13e-14,44;CL:0000133,3.13e-14,44;CL:0002319,7.89e-14,43;CL:0000540,4.34e-10,33;CL:0000047,4.34e-10,33;CL:0000031,4.34e-10,33;CL:0000404,4.34e-10,33;CL:0002321,1.62e-09,70;CL:0000393,2.27e-08,39;CL:0000211,2.27e-08,39;CL:0002453,6.14e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.73e-25!73;UBERON:0005743!1.73e-25!73;UBERON:0000073!6.20e-24!75;UBERON:0001016!6.20e-24!75;UBERON:0001049!1.07e-22!52;UBERON:0005068!1.07e-22!52;UBERON:0006241!1.07e-22!52;UBERON:0007135!1.07e-22!52;UBERON:0000955!9.12e-22!50;UBERON:0006238!9.12e-22!50;UBERON:0002616!2.99e-21!49;UBERON:0003080!5.69e-20!40;UBERON:0002346!1.53e-19!71;UBERON:0003075!1.53e-19!71;UBERON:0007284!1.53e-19!71;UBERON:0002780!2.05e-19!39;UBERON:0001890!2.05e-19!39;UBERON:0006240!2.05e-19!39;UBERON:0002020!2.45e-18!34;UBERON:0000033!6.49e-18!63;UBERON:0003056!1.77e-16!49;UBERON:0004121!2.55e-16!102;UBERON:0000924!2.55e-16!102;UBERON:0006601!2.55e-16!102;UBERON:0002791!9.97e-16!29;UBERON:0003528!9.97e-16!29;UBERON:0001893!9.97e-16!29;UBERON:0000956!2.08e-11!21;UBERON:0001869!2.08e-11!21;UBERON:0000203!2.08e-11!21;UBERON:0002619!1.36e-09!17;UBERON:0007811!2.41e-08!86;UBERON:0000025!5.84e-08!114 | |ontology_enrichment_uberon=UBERON:0001017!1.73e-25!73;UBERON:0005743!1.73e-25!73;UBERON:0000073!6.20e-24!75;UBERON:0001016!6.20e-24!75;UBERON:0001049!1.07e-22!52;UBERON:0005068!1.07e-22!52;UBERON:0006241!1.07e-22!52;UBERON:0007135!1.07e-22!52;UBERON:0000955!9.12e-22!50;UBERON:0006238!9.12e-22!50;UBERON:0002616!2.99e-21!49;UBERON:0003080!5.69e-20!40;UBERON:0002346!1.53e-19!71;UBERON:0003075!1.53e-19!71;UBERON:0007284!1.53e-19!71;UBERON:0002780!2.05e-19!39;UBERON:0001890!2.05e-19!39;UBERON:0006240!2.05e-19!39;UBERON:0002020!2.45e-18!34;UBERON:0000033!6.49e-18!63;UBERON:0003056!1.77e-16!49;UBERON:0004121!2.55e-16!102;UBERON:0000924!2.55e-16!102;UBERON:0006601!2.55e-16!102;UBERON:0002791!9.97e-16!29;UBERON:0003528!9.97e-16!29;UBERON:0001893!9.97e-16!29;UBERON:0000956!2.08e-11!21;UBERON:0001869!2.08e-11!21;UBERON:0000203!2.08e-11!21;UBERON:0002619!1.36e-09!17;UBERON:0007811!2.41e-08!86;UBERON:0000025!5.84e-08!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.29e-30,73;UBERON:0000073,6.92e-29,54;UBERON:0001016,1.71e-28,75;UBERON:0001049,3.22e-27,52;UBERON:0005068,3.22e-27,52;UBERON:0006241,3.22e-27,52;UBERON:0007135,3.22e-27,52;UBERON:0000955,2.12e-24,47;UBERON:0006238,2.12e-24,47;UBERON:0003080,3.76e-24,40;UBERON:0002616,8.87e-24,46;UBERON:0002780,1.82e-23,39;UBERON:0001890,1.82e-23,39;UBERON:0006240,1.82e-23,39;UBERON:0002020,3.81e-22,34;UBERON:0002346,1.08e-20,64;UBERON:0003075,1.08e-20,64;UBERON:0007284,1.08e-20,64;UBERON:0004121,4.59e-19,95;UBERON:0000924,4.59e-19,95;UBERON:0006601,4.59e-19,95;UBERON:0003528,6.12e-19,29;UBERON:0002791,6.12e-19,29;UBERON:0001893,6.12e-19,29;UBERON:0003056,2.70e-18,49;UBERON:0010371,2.90e-17,73;UBERON:0010314,1.33e-16,92;UBERON:0000956,1.23e-13,21;UBERON:0001869,1.23e-13,21;UBERON:0000203,1.23e-13,21;UBERON:0002619,2.06e-11,17;UBERON:0000025,1.80e-07,114;UBERON:0002021,3.87e-07,10;UBERON:0000411,3.87e-07,10;UBERON:0001950,3.87e-07,10 | |||
|phase1_expression=2.40223270657191,0.348975407639361,0.909998478779072,0.90739263392049,0.500895729946347,1.34303417529512,1.16806320297763,0.645616617207881,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0.342401459862411,0.174840804837995,0.333109761815663,0.202475267389826,0,0.630924330716475,0.548457734422955,0.84877930359606,15.0526623567394,0.992909512008853,0.261199789138935,0.159992422793407,1.37645568640302,0.57423196411502,2.15380998079537,1.29282739611533,1.52018735565099,2.26827116783938,0.886922042621219,1.27006134691926,0,0,1.73310971850765,2.99222361645286,3.47087905646027,0,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0.629484089877886,0,0.550640256485045,3.9119567217402,8.50298109883741,2.63623419281366,3.88859798148567,5.31948402176378,7.18762821824858,0.503347818173209,0,0.336093799142464,0.514518872071894,1.43266719969378,2.06268836910977,4.65327859977075,7.93486468908049,6.97214543856797,2.71075625655306,0,1.3498495759221,0.988866362566974,0.7104801149461,3.59520132622086,14.6002956022191,3.21437798156281,2.97013064329719,3.78584930432488,2.57085885963423,5.30084498283872,3.42974237801871,3.73797336971122,7.35375029288017,5.50579404996943,2.55374676170375,1.84327839907492,5.53922408466814,4.84884511092771,5.2091337055676,1.95428099300967,3.93933827022176,3.97275444219706,2.94628585473668,4.27115042397309,3.91438836233131,0.454357159999104,0.377857800533928,0.869593466105033,1.72084775396277,0.679971333707751,0,0.649776417447669,0.896053774194671,1.82577746171277,0.340860645156116,0.779358013808606,0.35333957451034,2.25349471642689,2.56652954828636,0,0,1.08245520505607,1.77351905832569,1.01104889002957,2.39786147410026,0,1.33597925158342,1.56136794089522,1.82679286987285,1.84492397804847,1.20578112442098,0.23517741427141,1.13099932196708,0.494389935468748,0.722996784599558,0.884610551949874,0.323533699894818,0.220841518460394,0,0,1.46390398505774,0.628340120440365,0.255457055208591,0.718890747035522,2.39961092397363,0.635351135365324,3.74476598512057,3.20250421973039,5.6544458450789,3.12883776346098,3.06858548796397,3.53239675751252,2.75810147215188,0.509196819251581,1.24406970610093,1.51633655060205,0.210441855886474,1.56144531555244,0.689706313300419,0.900310649026746,0.90422890701429,0.680364991513279,0.896796041993948,1.78033276663485,0.517406741478031,0.431135985865684,0.567318240503458,1.23165786914764,1.97276159184817,0.278047249225598,0.348252166522167,0.205782136407943,1.39323986772945,1.40442637462647,0.51469581422943,0.568326998791185,0.828503090142008,1.40715635988658,1.08037236876609,0.23674473558521,1.77087808572663,0.925602677324269,0.697601834251224,0.536546802799238,0.116765342367169,0.987359099480883,0.32833492815819,0.729619285912702,1.60819986167866,0.878200461164203,0.536825675041487,3.36463917702604,4.52780294468852,0.991256348951394,0,0.639864751605702,1.39342003116263,0.644337306610467,0.80673409849337,0.667134131534611,1.52180500890047,0.949058123089023,0.494096864172033,0.754005626400808,0.397912944082302,0.779856348476481,0.898819408654221,0.648414149624083,0.995706366271836,1.51734320762465,0.685491075658373,0,1.01825663922657,1.93952487167626,0.98190147846446,0.69560190836683,2.36176236767363,1.09899109488962,0.863780147452604,0.889357881261447,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0.482354319504834,0.763877555344259,1.15078454980324,0,1.09824565275233,0,1.11642284300551,0.624075346229121,0.252578877947112,1.25578189465339,0.964887042726734,0.369506380333209,0.947457058852424,0.651859905768103,1.35796068620151,0.938760993154008,1.00503754465089,0.714130922658041,0.195133647857799,0.630540576424764,1.32878813789265,0.797273843287435,0.983179888294428,0.518054945597687,0.723245292907558,0,1.08781136763742,0.491764273019036,0.275936746304732,0.642202359951168,1.17211686592203,0.983609672260053,0.252470927204373,0.94652465824877,1.56175497718655,0.861693590931196,0.238968797952552,0.445597348164788,1.13230612315533,0.404810701674894,0.292255857911312,0.790575555893047,3.21321316421807,1.70328102249922,2.49291845134157,0.977321756121456,0.989820737835213,0,2.42780636154981,2.11626489875326,1.13163047853539,2.06711325016541,0.922305443831782,0,0.727067458955011,1.06949213515416,0,0,0,2.04263763452273,1.44048875225048,2.19909762430683,2.35770738534752,2.6601035046341,4.8159580752559,1.97458824722545,3.04464949114599,0.23467170806371,0.63549621259146,0.661585194164886,0.65954501176592,0,0.422190474497091,0.119372344003136,0,0.582961673259701,1.29797711407357,0.341741761595705,0.412773735926445,0.555583582109135,0.188368457004691,0.820165366326151,0,0.509935289981566,0.559805809294632,0.276399947608848,0.954670618015114,1.42351197111511,1.01659733563424,1.51207477150522,0.836353184057875,0.655087691238533,0.674321731924103,0.495920734352016,0.785267825952089,1.16653475962614,0,80.044397293155,0.299033092087958,0.827292452285488,0.388902376688095,1.42075805825504,1.18269287843545,0.821500670520278,0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| |phase1_expression=2.40223270657191,0.348975407639361,0.909998478779072,0.90739263392049,0.500895729946347,1.34303417529512,1.16806320297763,0.645616617207881,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0.342401459862411,0.174840804837995,0.333109761815663,0.202475267389826,0,0.630924330716475,0.548457734422955,0.84877930359606,15.0526623567394,0.992909512008853,0.261199789138935,0.159992422793407,1.37645568640302,0.57423196411502,2.15380998079537,1.29282739611533,1.52018735565099,2.26827116783938,0.886922042621219,1.27006134691926,0,0,1.73310971850765,2.99222361645286,3.47087905646027,0,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0.629484089877886,0,0.550640256485045,3.9119567217402,8.50298109883741,2.63623419281366,3.88859798148567,5.31948402176378,7.18762821824858,0.503347818173209,0,0.336093799142464,0.514518872071894,1.43266719969378,2.06268836910977,4.65327859977075,7.93486468908049,6.97214543856797,2.71075625655306,0,1.3498495759221,0.988866362566974,0.7104801149461,3.59520132622086,14.6002956022191,3.21437798156281,2.97013064329719,3.78584930432488,2.57085885963423,5.30084498283872,3.42974237801871,3.73797336971122,7.35375029288017,5.50579404996943,2.55374676170375,1.84327839907492,5.53922408466814,4.84884511092771,5.2091337055676,1.95428099300967,3.93933827022176,3.97275444219706,2.94628585473668,4.27115042397309,3.91438836233131,0.454357159999104,0.377857800533928,0.869593466105033,1.72084775396277,0.679971333707751,0,0.649776417447669,0.896053774194671,1.82577746171277,0.340860645156116,0.779358013808606,0.35333957451034,2.25349471642689,2.56652954828636,0,0,1.08245520505607,1.77351905832569,1.01104889002957,2.39786147410026,0,1.33597925158342,1.56136794089522,1.82679286987285,1.84492397804847,1.20578112442098,0.23517741427141,1.13099932196708,0.494389935468748,0.722996784599558,0.884610551949874,0.323533699894818,0.220841518460394,0,0,1.46390398505774,0.628340120440365,0.255457055208591,0.718890747035522,2.39961092397363,0.635351135365324,3.74476598512057,3.20250421973039,5.6544458450789,3.12883776346098,3.06858548796397,3.53239675751252,2.75810147215188,0.509196819251581,1.24406970610093,1.51633655060205,0.210441855886474,1.56144531555244,0.689706313300419,0.900310649026746,0.90422890701429,0.680364991513279,0.896796041993948,1.78033276663485,0.517406741478031,0.431135985865684,0.567318240503458,1.23165786914764,1.97276159184817,0.278047249225598,0.348252166522167,0.205782136407943,1.39323986772945,1.40442637462647,0.51469581422943,0.568326998791185,0.828503090142008,1.40715635988658,1.08037236876609,0.23674473558521,1.77087808572663,0.925602677324269,0.697601834251224,0.536546802799238,0.116765342367169,0.987359099480883,0.32833492815819,0.729619285912702,1.60819986167866,0.878200461164203,0.536825675041487,3.36463917702604,4.52780294468852,0.991256348951394,0,0.639864751605702,1.39342003116263,0.644337306610467,0.80673409849337,0.667134131534611,1.52180500890047,0.949058123089023,0.494096864172033,0.754005626400808,0.397912944082302,0.779856348476481,0.898819408654221,0.648414149624083,0.995706366271836,1.51734320762465,0.685491075658373,0,1.01825663922657,1.93952487167626,0.98190147846446,0.69560190836683,2.36176236767363,1.09899109488962,0.863780147452604,0.889357881261447,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0.482354319504834,0.763877555344259,1.15078454980324,0,1.09824565275233,0,1.11642284300551,0.624075346229121,0.252578877947112,1.25578189465339,0.964887042726734,0.369506380333209,0.947457058852424,0.651859905768103,1.35796068620151,0.938760993154008,1.00503754465089,0.714130922658041,0.195133647857799,0.630540576424764,1.32878813789265,0.797273843287435,0.983179888294428,0.518054945597687,0.723245292907558,0,1.08781136763742,0.491764273019036,0.275936746304732,0.642202359951168,1.17211686592203,0.983609672260053,0.252470927204373,0.94652465824877,1.56175497718655,0.861693590931196,0.238968797952552,0.445597348164788,1.13230612315533,0.404810701674894,0.292255857911312,0.790575555893047,3.21321316421807,1.70328102249922,2.49291845134157,0.977321756121456,0.989820737835213,0,2.42780636154981,2.11626489875326,1.13163047853539,2.06711325016541,0.922305443831782,0,0.727067458955011,1.06949213515416,0,0,0,2.04263763452273,1.44048875225048,2.19909762430683,2.35770738534752,2.6601035046341,4.8159580752559,1.97458824722545,3.04464949114599,0.23467170806371,0.63549621259146,0.661585194164886,0.65954501176592,0,0.422190474497091,0.119372344003136,0,0.582961673259701,1.29797711407357,0.341741761595705,0.412773735926445,0.555583582109135,0.188368457004691,0.820165366326151,0,0.509935289981566,0.559805809294632,0.276399947608848,0.954670618015114,1.42351197111511,1.01659733563424,1.51207477150522,0.836353184057875,0.655087691238533,0.674321731924103,0.495920734352016,0.785267825952089,1.16653475962614,0,80.044397293155,0.299033092087958,0.827292452285488,0.388902376688095,1.42075805825504,1.18269287843545,0.821500670520278,0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| ||
|short_description=p2@Grcc10 | |short_description=p2@Grcc10 | ||
}} | }} |
Latest revision as of 15:59, 26 September 2015
Short description: | p2@Grcc10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Grcc10_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -22bp_to_NM_013535, uc009drn.1, uc009drp.1_5end |
EntrezGene: | Grcc10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.55e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.55e-15 | 23 |
ectodermal cell | 3.13e-14 | 44 |
neurectodermal cell | 3.13e-14 | 44 |
neural cell | 7.89e-14 | 43 |
neuron | 4.34e-10 | 33 |
neuronal stem cell | 4.34e-10 | 33 |
neuroblast | 4.34e-10 | 33 |
electrically signaling cell | 4.34e-10 | 33 |
embryonic cell | 1.62e-09 | 70 |
electrically responsive cell | 2.27e-08 | 39 |
electrically active cell | 2.27e-08 | 39 |
oligodendrocyte precursor cell | 6.14e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.29e-30 | 73 |
regional part of nervous system | 6.92e-29 | 54 |
nervous system | 1.71e-28 | 75 |
neural tube | 3.22e-27 | 52 |
neural rod | 3.22e-27 | 52 |
future spinal cord | 3.22e-27 | 52 |
neural keel | 3.22e-27 | 52 |
brain | 2.12e-24 | 47 |
future brain | 2.12e-24 | 47 |
anterior neural tube | 3.76e-24 | 40 |
regional part of brain | 8.87e-24 | 46 |
regional part of forebrain | 1.82e-23 | 39 |
forebrain | 1.82e-23 | 39 |
future forebrain | 1.82e-23 | 39 |
gray matter | 3.81e-22 | 34 |
neurectoderm | 1.08e-20 | 64 |
neural plate | 1.08e-20 | 64 |
presumptive neural plate | 1.08e-20 | 64 |
ectoderm-derived structure | 4.59e-19 | 95 |
ectoderm | 4.59e-19 | 95 |
presumptive ectoderm | 4.59e-19 | 95 |
brain grey matter | 6.12e-19 | 29 |
regional part of telencephalon | 6.12e-19 | 29 |
telencephalon | 6.12e-19 | 29 |
pre-chordal neural plate | 2.70e-18 | 49 |
ecto-epithelium | 2.90e-17 | 73 |
structure with developmental contribution from neural crest | 1.33e-16 | 92 |
cerebral cortex | 1.23e-13 | 21 |
cerebral hemisphere | 1.23e-13 | 21 |
pallium | 1.23e-13 | 21 |
regional part of cerebral cortex | 2.06e-11 | 17 |
tube | 1.80e-07 | 114 |
occipital lobe | 3.87e-07 | 10 |
visual cortex | 3.87e-07 | 10 |
neocortex | 3.87e-07 | 10 |