FFCP PHASE1:Hg19::chr2:178128250..178128293,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:178128250..178128293,-
|short_description=p6@NFE2L2
|description=CAGE_peak_6_at_NFE2L2_5end
|association_with_transcript=0bp_to_ENST00000477534_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4780 | |EntrezGene=4780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7782 | |HGNC=7782 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477534_5end | |||
|cluster_id=chr2:178128250..178128293,- | |||
|description=CAGE_peak_6_at_NFE2L2_5end | |||
|id=chr2:178128250..178128293,- | |||
|ontology_enrichment_celltype=CL:0000738!5.30e-14!140;CL:0002031!4.95e-12!124;CL:0000037!1.05e-11!172;CL:0000566!1.05e-11!172;CL:0002032!7.36e-11!165;CL:0000837!7.36e-11!165;CL:0000988!2.55e-10!182;CL:0002087!1.31e-09!119;CL:0000838!1.57e-08!52;CL:0000542!1.71e-08!53;CL:0000051!1.71e-08!53;CL:0000791!1.46e-07!18;CL:0000789!1.46e-07!18;CL:0002420!1.46e-07!18;CL:0002419!1.46e-07!18;CL:0000790!1.46e-07!18;CL:0000625!9.95e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.04e-07;18!CL:0000789;1.04e-07;18!CL:0002419;1.04e-07;18!CL:0000625;4.86e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.19e-14,136;CL:0002031,1.56e-12,120;CL:0000037,2.80e-12,168;CL:0002032,2.21e-11,161;CL:0000837,2.21e-11,161;CL:0000988,3.15e-11,177;CL:0002087,6.00e-10,115;CL:0000838,3.17e-08,52;CL:0000542,3.41e-08,53;CL:0000051,3.41e-08,53;CL:0000791,1.06e-07,18;CL:0000789,1.06e-07,18;CL:0002420,1.06e-07,18;CL:0002419,1.06e-07,18;CL:0000790,1.06e-07,18;CL:0000625,4.64e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-07;18!UBERON:0006601;1.74e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.70e-33!115;UBERON:0001049!1.43e-21!57;UBERON:0005068!1.43e-21!57;UBERON:0006241!1.43e-21!57;UBERON:0007135!1.43e-21!57;UBERON:0002780!4.82e-19!41;UBERON:0001890!4.82e-19!41;UBERON:0006240!4.82e-19!41;UBERON:0003080!9.28e-18!42;UBERON:0005743!5.41e-17!86;UBERON:0002616!8.98e-17!59;UBERON:0001017!1.25e-16!82;UBERON:0000955!6.22e-16!69;UBERON:0006238!6.22e-16!69;UBERON:0000073!1.08e-15!94;UBERON:0001016!1.08e-15!94;UBERON:0002020!4.66e-15!34;UBERON:0003528!4.66e-15!34;UBERON:0001893!6.92e-15!34;UBERON:0003075!7.11e-15!86;UBERON:0007284!7.11e-15!86;UBERON:0002791!1.87e-14!33;UBERON:0002346!8.07e-14!90;UBERON:0001869!1.15e-13!32;UBERON:0003056!2.90e-11!61;UBERON:0002619!2.12e-10!22;UBERON:0000956!3.45e-10!25;UBERON:0000203!3.45e-10!25;UBERON:0000153!1.76e-09!129;UBERON:0007811!1.76e-09!129;UBERON:0001950!2.57e-09!20;UBERON:0000033!2.60e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.60e-14;41!UBERON:0001890;1.60e-14;41!UBERON:0000073;1.16e-13;53!UBERON:0002616;1.16e-13;53!UBERON:0001893;1.24e-13;34!UBERON:0003528;1.50e-13;34!UBERON:0002020;1.50e-13;34!UBERON:0002791;3.05e-13;32!UBERON:0001869;4.77e-13;32!UBERON:0000956;1.03e-10;25!UBERON:0000203;1.03e-10;25!UBERON:0002619;1.20e-10;22!UBERON:0007023;1.18e-09;114!UBERON:0001950;1.68e-09;20!UBERON:0001017;8.50e-09;75!UBERON:0000955;1.84e-08;68!UBERON:0001016;2.21e-07;83!UBERON:0000125;6.57e-07;9!UBERON:0002308;6.57e-07;9!UBERON:0002420;9.19e-07;9!UBERON:0007245;9.19e-07;9!UBERON:0010009;9.19e-07;9!UBERON:0010011;9.19e-07;9!UBERON:0000454;9.19e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.18e-34,114;UBERON:0001049,1.99e-24,56;UBERON:0005068,1.99e-24,56;UBERON:0006241,1.99e-24,56;UBERON:0007135,1.99e-24,56;UBERON:0000073,1.18e-22,53;UBERON:0002616,1.18e-22,53;UBERON:0002780,3.69e-20,41;UBERON:0001890,3.69e-20,41;UBERON:0003080,3.69e-20,41;UBERON:0006240,3.69e-20,41;UBERON:0001017,6.01e-19,81;UBERON:0000955,4.04e-18,68;UBERON:0006238,4.04e-18,68;UBERON:0003075,6.05e-17,82;UBERON:0007284,6.05e-17,82;UBERON:0001016,1.28e-16,89;UBERON:0003528,6.43e-16,34;UBERON:0002020,6.43e-16,34;UBERON:0001893,9.80e-16,34;UBERON:0002346,1.04e-15,86;UBERON:0002791,1.14e-14,32;UBERON:0001869,1.95e-14,32;UBERON:0003056,1.20e-13,61;UBERON:0010371,4.04e-11,104;UBERON:0002619,5.80e-11,22;UBERON:0000956,9.73e-11,25;UBERON:0000203,9.73e-11,25;UBERON:0001950,8.23e-10,20;UBERON:0010314,1.05e-08,132;UBERON:0011216,1.53e-07,223;UBERON:0002390,1.65e-07,98;UBERON:0003061,1.65e-07,98;UBERON:0002193,3.19e-07,108;UBERON:0000125,7.23e-07,9;UBERON:0002308,7.23e-07,9;UBERON:0002420,9.85e-07,9;UBERON:0007245,9.85e-07,9;UBERON:0010009,9.85e-07,9;UBERON:0010011,9.85e-07,9;UBERON:0000454,9.85e-07,9 | |||
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| ||
|short_description=p6@NFE2L2 | |||
}} | }} |
Latest revision as of 10:17, 18 September 2015
Short description: | p6@NFE2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NFE2L2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000477534_5end |
EntrezGene: | NFE2L2 |
HGNC: | 7782 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.19e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.56e-12 | 120 |
hematopoietic stem cell | 2.80e-12 | 168 |
hematopoietic oligopotent progenitor cell | 2.21e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-11 | 161 |
hematopoietic cell | 3.15e-11 | 177 |
nongranular leukocyte | 6.00e-10 | 115 |
lymphoid lineage restricted progenitor cell | 3.17e-08 | 52 |
lymphocyte | 3.41e-08 | 53 |
common lymphoid progenitor | 3.41e-08 | 53 |
mature alpha-beta T cell | 1.06e-07 | 18 |
alpha-beta T cell | 1.06e-07 | 18 |
immature T cell | 1.06e-07 | 18 |
mature T cell | 1.06e-07 | 18 |
immature alpha-beta T cell | 1.06e-07 | 18 |
CD8-positive, alpha-beta T cell | 4.64e-07 | 11 |