FFCP PHASE1:Mm9::chr4:149050152..149050174,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18707 | |EntrezGene=18707 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q3TBW3 | |UniProt=Q3TBW3 | ||
|association_with_transcript=0bp_to_ENSMUST00000118704_5end | |association_with_transcript=0bp_to_ENSMUST00000118704_5end | ||
|cluster_id=chr4:149050152..149050174,- | |||
|description=CAGE_peak_5_at_Pik3cd_5end | |description=CAGE_peak_5_at_Pik3cd_5end | ||
|id=chr4:149050152..149050174,- | |id=chr4:149050152..149050174,- | ||
|ontology_enrichment_celltype=CL:0000117!3.19e-09!23;CL:0000337!3.19e-09!23;CL:0000540!5.03e-07!33;CL:0000047!5.03e-07!33;CL:0000031!5.03e-07!33;CL:0000404!5.03e-07!33 | |ontology_enrichment_celltype=CL:0000117!3.19e-09!23;CL:0000337!3.19e-09!23;CL:0000540!5.03e-07!33;CL:0000047!5.03e-07!33;CL:0000031!5.03e-07!33;CL:0000404!5.03e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-11,23;CL:0000337,1.07e-11,23;CL:0000540,5.49e-08,33;CL:0000047,5.49e-08,33;CL:0000031,5.49e-08,33;CL:0000404,5.49e-08,33;CL:0000393,3.02e-07,39;CL:0000211,3.02e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.17e-15!50;UBERON:0006238!1.17e-15!50;UBERON:0002616!2.97e-15!49;UBERON:0001049!1.26e-14!52;UBERON:0005068!1.26e-14!52;UBERON:0006241!1.26e-14!52;UBERON:0007135!1.26e-14!52;UBERON:0000033!2.93e-14!63;UBERON:0002346!3.04e-14!71;UBERON:0003075!3.04e-14!71;UBERON:0007284!3.04e-14!71;UBERON:0001017!4.48e-14!73;UBERON:0005743!4.48e-14!73;UBERON:0000073!1.16e-13!75;UBERON:0001016!1.16e-13!75;UBERON:0003080!5.91e-13!40;UBERON:0003056!1.62e-12!49;UBERON:0002780!1.65e-12!39;UBERON:0001890!1.65e-12!39;UBERON:0006240!1.65e-12!39;UBERON:0004121!2.04e-12!102;UBERON:0000924!2.04e-12!102;UBERON:0006601!2.04e-12!102;UBERON:0002020!2.60e-11!34;UBERON:0002791!1.19e-10!29;UBERON:0003528!1.19e-10!29;UBERON:0001893!1.19e-10!29;UBERON:0000956!3.43e-07!21;UBERON:0001869!3.43e-07!21;UBERON:0000203!3.43e-07!21 | |ontology_enrichment_uberon=UBERON:0000955!1.17e-15!50;UBERON:0006238!1.17e-15!50;UBERON:0002616!2.97e-15!49;UBERON:0001049!1.26e-14!52;UBERON:0005068!1.26e-14!52;UBERON:0006241!1.26e-14!52;UBERON:0007135!1.26e-14!52;UBERON:0000033!2.93e-14!63;UBERON:0002346!3.04e-14!71;UBERON:0003075!3.04e-14!71;UBERON:0007284!3.04e-14!71;UBERON:0001017!4.48e-14!73;UBERON:0005743!4.48e-14!73;UBERON:0000073!1.16e-13!75;UBERON:0001016!1.16e-13!75;UBERON:0003080!5.91e-13!40;UBERON:0003056!1.62e-12!49;UBERON:0002780!1.65e-12!39;UBERON:0001890!1.65e-12!39;UBERON:0006240!1.65e-12!39;UBERON:0004121!2.04e-12!102;UBERON:0000924!2.04e-12!102;UBERON:0006601!2.04e-12!102;UBERON:0002020!2.60e-11!34;UBERON:0002791!1.19e-10!29;UBERON:0003528!1.19e-10!29;UBERON:0001893!1.19e-10!29;UBERON:0000956!3.43e-07!21;UBERON:0001869!3.43e-07!21;UBERON:0000203!3.43e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-21,54;UBERON:0001049,4.13e-19,52;UBERON:0005068,4.13e-19,52;UBERON:0006241,4.13e-19,52;UBERON:0007135,4.13e-19,52;UBERON:0001017,1.68e-18,73;UBERON:0000955,3.18e-18,47;UBERON:0006238,3.18e-18,47;UBERON:0002616,1.22e-17,46;UBERON:0001016,1.47e-17,75;UBERON:0003080,6.79e-16,40;UBERON:0002346,1.01e-15,64;UBERON:0003075,1.01e-15,64;UBERON:0007284,1.01e-15,64;UBERON:0002780,3.01e-15,39;UBERON:0001890,3.01e-15,39;UBERON:0006240,3.01e-15,39;UBERON:0002020,2.88e-14,34;UBERON:0003528,9.71e-14,29;UBERON:0002791,9.71e-14,29;UBERON:0001893,9.71e-14,29;UBERON:0004121,7.95e-13,95;UBERON:0000924,7.95e-13,95;UBERON:0006601,7.95e-13,95;UBERON:0003056,9.07e-13,49;UBERON:0010371,4.82e-12,73;UBERON:0010314,7.78e-10,92;UBERON:0000956,1.63e-09,21;UBERON:0001869,1.63e-09,21;UBERON:0000203,1.63e-09,21;UBERON:0002619,1.36e-08,17;UBERON:0002021,1.19e-07,10;UBERON:0000411,1.19e-07,10;UBERON:0001950,1.19e-07,10;UBERON:0000025,6.01e-07,114 | |||
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| ||
|short_description=p5@Pik3cd | |short_description=p5@Pik3cd | ||
}} | }} |
Latest revision as of 17:47, 26 September 2015
Short description: | p5@Pik3cd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pik3cd_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000118704_5end |
EntrezGene: | Pik3cd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.07e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.07e-11 | 23 |
neuron | 5.49e-08 | 33 |
neuronal stem cell | 5.49e-08 | 33 |
neuroblast | 5.49e-08 | 33 |
electrically signaling cell | 5.49e-08 | 33 |
electrically responsive cell | 3.02e-07 | 39 |
electrically active cell | 3.02e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.17e-21 | 54 |
neural tube | 4.13e-19 | 52 |
neural rod | 4.13e-19 | 52 |
future spinal cord | 4.13e-19 | 52 |
neural keel | 4.13e-19 | 52 |
central nervous system | 1.68e-18 | 73 |
brain | 3.18e-18 | 47 |
future brain | 3.18e-18 | 47 |
regional part of brain | 1.22e-17 | 46 |
nervous system | 1.47e-17 | 75 |
anterior neural tube | 6.79e-16 | 40 |
neurectoderm | 1.01e-15 | 64 |
neural plate | 1.01e-15 | 64 |
presumptive neural plate | 1.01e-15 | 64 |
regional part of forebrain | 3.01e-15 | 39 |
forebrain | 3.01e-15 | 39 |
future forebrain | 3.01e-15 | 39 |
gray matter | 2.88e-14 | 34 |
brain grey matter | 9.71e-14 | 29 |
regional part of telencephalon | 9.71e-14 | 29 |
telencephalon | 9.71e-14 | 29 |
ectoderm-derived structure | 7.95e-13 | 95 |
ectoderm | 7.95e-13 | 95 |
presumptive ectoderm | 7.95e-13 | 95 |
pre-chordal neural plate | 9.07e-13 | 49 |
ecto-epithelium | 4.82e-12 | 73 |
structure with developmental contribution from neural crest | 7.78e-10 | 92 |
cerebral cortex | 1.63e-09 | 21 |
cerebral hemisphere | 1.63e-09 | 21 |
pallium | 1.63e-09 | 21 |
regional part of cerebral cortex | 1.36e-08 | 17 |
occipital lobe | 1.19e-07 | 10 |
visual cortex | 1.19e-07 | 10 |
neocortex | 1.19e-07 | 10 |
tube | 6.01e-07 | 114 |