FFCP PHASE1:Hg19::chr2:175436733..175436762,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:175436733..175436762,-
|short_description=p6@WIPF1
|description=CAGE_peak_6_at_WIPF1_5end
|association_with_transcript=198bp_to_AF106062_5end
|EntrezGene=...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7456 | |EntrezGene=7456 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12736 | |HGNC=12736 | ||
|TSSclassifier=strong | |||
|UniProt=O43516 | |UniProt=O43516 | ||
|association_with_transcript=198bp_to_AF106062_5end | |||
|cluster_id=chr2:175436733..175436762,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_6_at_WIPF1_5end | |||
|id=chr2:175436733..175436762,- | |||
|ontology_enrichment_celltype=CL:0000738!5.09e-32!140;CL:0000037!5.46e-28!172;CL:0000566!5.46e-28!172;CL:0000988!8.59e-28!182;CL:0002087!4.20e-27!119;CL:0002032!1.37e-26!165;CL:0000837!1.37e-26!165;CL:0002031!5.86e-26!124;CL:0000766!6.70e-21!76;CL:0002057!2.03e-17!42;CL:0000839!6.66e-17!70;CL:0000557!9.43e-17!71;CL:0000763!5.96e-16!112;CL:0000049!5.96e-16!112;CL:0002194!1.97e-15!63;CL:0000576!1.97e-15!63;CL:0000040!1.97e-15!63;CL:0000559!1.97e-15!63;CL:0000860!8.95e-15!45;CL:0002009!1.22e-14!65;CL:0002320!3.51e-14!365;CL:0000134!1.04e-13!358;CL:0000219!3.36e-12!390;CL:0000542!2.89e-10!53;CL:0000051!2.89e-10!53;CL:0000838!5.59e-10!52;CL:0000048!4.04e-08!430;CL:0000723!2.89e-07!436;CL:0000034!7.72e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.78e-21;33!CL:0002057;3.78e-21;33!CL:0000473;4.47e-21;39!CL:0000234;4.47e-21;39!CL:0000766;1.51e-15;69!CL:0000576;1.09e-12;48!CL:0002087;5.50e-12;104!CL:0000738;4.11e-10;136!CL:0000763;1.36e-08;100!CL:0000097;4.16e-08;5!CL:0000988;5.84e-08;177!CL:0000791;3.28e-07;18!CL:0000789;3.28e-07;18!CL:0002419;3.28e-07;18!CL:0000094;7.16e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.81e-43,136;CL:0002031,3.76e-37,120;CL:0002087,2.01e-36,115;CL:0000037,1.84e-34,168;CL:0002032,3.95e-33,161;CL:0000837,3.95e-33,161;CL:0000766,8.76e-33,72;CL:0000988,2.25e-32,177;CL:0000473,1.39e-26,48;CL:0000234,1.39e-26,48;CL:0000839,6.52e-26,66;CL:0000557,2.53e-25,67;CL:0000860,1.99e-22,42;CL:0002057,1.99e-22,42;CL:0002194,8.85e-22,59;CL:0000576,8.85e-22,59;CL:0000040,8.85e-22,59;CL:0000559,8.85e-22,59;CL:0002009,1.09e-20,61;CL:0000763,2.59e-20,108;CL:0000049,2.59e-20,108;CL:0000838,2.72e-12,52;CL:0000134,4.11e-12,354;CL:0000542,6.57e-12,53;CL:0000051,6.57e-12,53;CL:0002320,2.16e-11,361;CL:0000219,1.05e-09,386;CL:0000097,3.13e-08,5;CL:0002028,3.13e-08,5;CL:0000048,3.94e-07,427;CL:0000094,4.14e-07,8;CL:0000945,4.37e-07,24;CL:0000826,4.37e-07,24;CL:0000791,4.91e-07,18;CL:0000789,4.91e-07,18;CL:0002420,4.91e-07,18;CL:0002419,4.91e-07,18;CL:0000790,4.91e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;5.01e-17;42!CL:0000790;3.28e-07;18!CL:0000049;8.06e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.25e-25!102;UBERON:0003061!3.25e-25!102;UBERON:0002193!1.41e-23!112;UBERON:0002371!4.50e-16!80;UBERON:0001474!2.31e-15!86;UBERON:0004765!1.84e-13!101;UBERON:0001434!1.84e-13!101;UBERON:0002384!1.19e-12!375;UBERON:0002405!2.29e-11!115;UBERON:0000178!4.58e-08!15;UBERON:0000179!4.58e-08!15;UBERON:0000463!4.58e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.19e-12;15!UBERON:0000179;9.19e-12;15!UBERON:0000463;9.19e-12;15!UBERON:0002390;1.92e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.60e-36,98;UBERON:0003061,1.60e-36,98;UBERON:0002193,4.82e-34,108;UBERON:0002405,5.32e-24,93;UBERON:0002371,2.86e-23,76;UBERON:0001474,1.47e-20,82;UBERON:0004765,1.57e-17,90;UBERON:0001434,2.46e-15,100;UBERON:0003081,1.06e-13,203;UBERON:0000178,3.16e-12,15;UBERON:0000179,3.16e-12,15;UBERON:0000463,3.16e-12,15;UBERON:0002384,7.48e-11,371 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0.313454721478088,0,0.410623275218653,0.125542639594803,6.1130724598361,4.67973359864691,4.72264687882075,1.96682138424452,0,0.154816123316076,0,0,0,0.92960640696362,0.284338464974843,0.293600439334847,0,1.60435557976113,0.651032612147555,0.895661896959697,1.29557466407592,0,7.56070841653736,5.29026321164333,3.39617685662943,4.88100977501938,4.11167888021826,2.78735733805593,2.58923153089935,1.0246428261164,0.945928919554341,2.06847408441971,0.645484683583826,0,9.22387463758763,6.27684145133045,1.57306439111559,5.20342617030534,2.24650318953266,1.91801137739712,3.62836430205388,4.18873681005427,0.852449501065388,4.06292934080018,0.56738522469114,1.24564449799115,1.50749199154046,2.08593167368081,1.3031330682307,2.42159801053347,1.10483290796269,1.58231193720442,1.47878700418359,1.06302149982522,0.419317291016752,0.786300418025466,0.600707571366025,1.12507910687956,0.855038231223746,1.59133341759272,0.91332076882317,0,0.546138611262131,0,0,0.400395987036012,0,0,0.954053754535364,1.70763890732835,2.34894875748376,2.29363936875137,0,0.560508562981536,0.263384084775077,1.180258620683,5.10913991573914,2.2616164889946,1.5046784585161,0.32592226663359,0.473447805734733,0,2.89667187901451,1.76763544484902,1.10766947291811,1.89562704635511,1.5370958367081,0.910415432919148,1.64437904603676,2.21080014228679,2.60822777161547,1.18629250529648,0.802622484269139,3.1360657141493,1.81294948316106,1.14966148080576,0.34362744548263,2.27717722817553,1.59282707162048,0.651083453856419,0,0.903450714466637,1.15187950038977,0,0.473554504088034,0,2.01606743224732,4.81392352410313,2.46201486600758,0,0,0,0,0,1.15877215168659,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.458426764241994,0,0,0.649094787309367,0.870648686496336,3.32394901297163,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,0,0.81014194788176,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0,0,0,0.132409180813219,0.286836620748814,1.41867352879343,0,0,0,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0,0.704606991862589,0.485618833104395,0.561803226808994,0.204154171254893,0.491337269247072,1.54988671763648,0,0.741800787835671,0,1.43723628363248,0.168336113954066,0.875829639103749,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0.717558542755448,0.640672166455702,0.211931901159562,0,0.618315175430633,0,0.744467425326359,0.168776332241266,0.584622030967192,0,0.644349290496095,1.2931684545505,0,0.806016785821122,0.169560592310488,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0.236613600079688,0.505754070234305,0,0.441175890929576,0,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0,0,0,0,0,0.441463099414651,0.368965315629341,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,1.23108503043699,1.40402559083543,1.48631162288728,0,0,0,0,0,0,5.41929561685538,2.99364675644969,3.31724984865235,2.45003920808834,2.65109110195398,0.126995788584338,1.14596527667483,1.17217447210047,0,0.925447434329912,0.300343057843917,0.857479297891735,0.672786506072164,0.43596006883328,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.499864955910285,0,2.51128545716063,6.32501818449095,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0.179060963239896,2.12961773587702,2.36436912242313,3.88129634747131,2.69520376187472,0,0,0,0,0,21.7212036944683,56.8406772487647,16.9910360508775,0.858840442033979,0.500170521059677,0.542530047399471,0.831883446123229,1.78428988797162,0.788512075169673,0.35142424497814,0.300946099727719,0,0,0,0.184369168541703,0.434418072340414,0,0.343143423810856,1.6541442089831,4.96142661882819,2.98837161849644,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.512556597022804,0,0,0,0.925258162815933,0.177561725313127,0.410635780069046,3.11552657510173,0.348631135379878,0,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0.850468526382578,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0.366277859273374,0.165018999841176,0,1.30012049207304,0,0.290012154876366,0,0.307007349452259,0.137836572484531,0.429680979473094,0.435050081742686,0.170453254832202,0.445160178233687,0.165284915360978,0.192190067365106,0,0.2023155617111,1.85938219718914,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,1.09814811894422,0.235624804691373,0,0,0,0,1.70599442741899,0,0.13649991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|short_description=p6@WIPF1 | |||
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Latest revision as of 07:23, 18 September 2015
Short description: | p6@WIPF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_WIPF1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 198bp_to_AF106062_5end |
EntrezGene: | WIPF1 |
HGNC: | 12736 |
UniProt: | O43516 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.60e-36 | 98 |
blood island | 1.60e-36 | 98 |
hemolymphoid system | 4.82e-34 | 108 |
immune system | 5.32e-24 | 93 |
bone marrow | 2.86e-23 | 76 |
bone element | 1.47e-20 | 82 |
skeletal element | 1.57e-17 | 90 |
skeletal system | 2.46e-15 | 100 |
lateral plate mesoderm | 1.06e-13 | 203 |
blood | 3.16e-12 | 15 |
haemolymphatic fluid | 3.16e-12 | 15 |
organism substance | 3.16e-12 | 15 |
connective tissue | 7.48e-11 | 371 |