FFCP PHASE1:Hg19::chr2:172864786..172864797,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:172864786..172864797,-
|short_description=p7@SLC25A12
|description=CAGE_peak_7_at_SLC25A12_5end
|association_with_transcript=-20bp_to_ENST00000464063_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8604 | |EntrezGene=8604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10982 | |HGNC=10982 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000464063_5end | |||
|cluster_id=chr2:172864786..172864797,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_SLC25A12_5end | |||
|id=chr2:172864786..172864797,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;1.98e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.57e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.60e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.98e-10;1!DOID:3149;1.98e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.75e-10,1;DOID:3149,4.75e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.78e-50!57;UBERON:0005068!2.78e-50!57;UBERON:0006241!2.78e-50!57;UBERON:0007135!2.78e-50!57;UBERON:0001869!2.90e-50!32;UBERON:0002020!2.90e-50!34;UBERON:0003528!2.90e-50!34;UBERON:0001893!7.40e-50!34;UBERON:0002780!6.20e-49!41;UBERON:0001890!6.20e-49!41;UBERON:0006240!6.20e-49!41;UBERON:0002791!7.72e-48!33;UBERON:0003080!1.53e-47!42;UBERON:0002616!1.66e-45!59;UBERON:0000955!2.56e-41!69;UBERON:0006238!2.56e-41!69;UBERON:0000956!4.48e-41!25;UBERON:0000203!4.48e-41!25;UBERON:0002619!9.58e-40!22;UBERON:0001017!5.46e-39!82;UBERON:0005743!1.37e-36!86;UBERON:0001950!8.25e-36!20;UBERON:0000073!1.72e-33!94;UBERON:0001016!1.72e-33!94;UBERON:0003075!7.06e-33!86;UBERON:0007284!7.06e-33!86;UBERON:0002346!1.70e-32!90;UBERON:0003056!1.07e-29!61;UBERON:0000033!6.59e-23!123;UBERON:0007023!5.69e-22!115;UBERON:0000153!2.99e-21!129;UBERON:0007811!2.99e-21!129;UBERON:0000924!7.96e-17!173;UBERON:0006601!7.96e-17!173;UBERON:0004121!1.23e-16!169;UBERON:0000200!5.91e-14!6;UBERON:0001871!1.47e-13!7;UBERON:0002021!9.45e-12!5;UBERON:0000349!1.51e-11!5;UBERON:0002420!6.51e-11!9;UBERON:0007245!6.51e-11!9;UBERON:0010009!6.51e-11!9;UBERON:0010011!6.51e-11!9;UBERON:0000454!6.51e-11!9;UBERON:0002308!9.71e-11!9;UBERON:0000125!9.71e-11!9;UBERON:0000025!1.24e-08!194;UBERON:0001872!8.50e-08!5;UBERON:0002771!9.06e-08!3;UBERON:0009663!2.49e-07!7;UBERON:0000988!2.94e-07!3;UBERON:0000064!4.58e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.05e-86;22!UBERON:0001950;2.96e-82;20!UBERON:0000956;6.27e-76;25!UBERON:0000203;6.27e-76;25!UBERON:0001869;1.44e-67;32!UBERON:0001893;2.25e-61;34!UBERON:0002791;1.76e-60;32!UBERON:0003528;9.12e-54;34!UBERON:0002020;9.12e-54;34!UBERON:0002780;4.53e-45;41!UBERON:0001890;4.53e-45;41!UBERON:0000200;6.54e-38;6!UBERON:0002021;3.41e-29;5!UBERON:0001870;3.40e-28;3!UBERON:0000073;7.70e-26;53!UBERON:0002616;7.70e-26;53!UBERON:0002702;1.49e-19;2!UBERON:0001017;2.16e-18;75!UBERON:0000955;2.32e-18;68!UBERON:0001872;3.50e-17;5!UBERON:0000349;6.39e-17;5!UBERON:0001871;2.96e-12;6!UBERON:0001016;7.87e-12;83!UBERON:0002581;1.98e-10;1!UBERON:0002902;1.98e-10;1!UBERON:0001882;1.98e-10;1!UBERON:0002022;1.98e-10;1!UBERON:0009899;1.98e-10;1!UBERON:0007190;1.98e-10;1!UBERON:0005403;1.98e-10;1!UBERON:0007023;1.02e-09;114!UBERON:0011216;2.89e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.18e-86,22;UBERON:0001950,1.37e-82,20;UBERON:0001869,1.96e-76,32;UBERON:0000956,5.07e-76,25;UBERON:0000203,5.07e-76,25;UBERON:0001893,6.33e-72,34;UBERON:0002791,1.16e-67,32;UBERON:0003528,1.16e-63,34;UBERON:0002020,1.16e-63,34;UBERON:0002780,1.60e-59,41;UBERON:0001890,1.60e-59,41;UBERON:0003080,1.60e-59,41;UBERON:0006240,1.60e-59,41;UBERON:0000073,9.89e-46,53;UBERON:0002616,9.89e-46,53;UBERON:0000955,7.21e-44,68;UBERON:0006238,7.21e-44,68;UBERON:0001049,3.45e-43,56;UBERON:0005068,3.45e-43,56;UBERON:0006241,3.45e-43,56;UBERON:0007135,3.45e-43,56;UBERON:0001017,8.63e-41,81;UBERON:0003056,1.69e-39,61;UBERON:0000200,8.02e-38,6;UBERON:0001016,1.60e-36,89;UBERON:0002021,1.24e-29,5;UBERON:0003075,7.72e-29,82;UBERON:0007284,7.72e-29,82;UBERON:0001870,1.07e-28,3;UBERON:0002346,2.17e-27,86;UBERON:0007023,8.42e-26,114;UBERON:0010371,3.11e-22,104;UBERON:0002702,8.54e-20,2;UBERON:0004121,6.46e-18,171;UBERON:0000924,6.46e-18,171;UBERON:0006601,6.46e-18,171;UBERON:0001872,3.62e-17,5;UBERON:0010314,5.64e-17,132;UBERON:0000349,1.94e-16,5;UBERON:0011216,5.19e-13,223;UBERON:0001871,3.82e-12,6;UBERON:0000025,7.99e-11,192;UBERON:0002902,8.95e-11,1;UBERON:0009899,8.95e-11,1;UBERON:0002581,2.08e-10,1;UBERON:0001882,3.01e-10,1;UBERON:0005403,3.01e-10,1;UBERON:0007190,3.29e-10,1;UBERON:0002022,3.61e-10,1;UBERON:0004111,4.28e-08,240 | |||
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| ||
|short_description=p7@SLC25A12 | |||
}} | }} |
Latest revision as of 04:44, 18 September 2015
Short description: | p7@SLC25A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC25A12_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -20bp_to_ENST00000464063_5end |
EntrezGene: | SLC25A12 |
HGNC: | 10982 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.57e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.75e-10 | 1 |
keratoacanthoma | 4.75e-10 | 1 |