FFCP PHASE1:Hg19::chr2:166651270..166651288,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:166651270..166651288,-
|short_description=p8@GALNT3
|description=CAGE_peak_8_at_GALNT3_5end
|association_with_transcript=-78bp_to_ENST00000392701_5end
|En...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2591 | |EntrezGene=2591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4125 | |HGNC=4125 | ||
|TSSclassifier=strong | |||
|UniProt=Q14435 | |UniProt=Q14435 | ||
|association_with_transcript=-78bp_to_ENST00000392701_5end | |||
|cluster_id=chr2:166651270..166651288,- | |||
|description=CAGE_peak_8_at_GALNT3_5end | |||
|id=chr2:166651270..166651288,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.13e-15;3!CL:0000097;4.87e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.07e-15,3;CL:0000097,6.74e-09,5;CL:0002028,6.74e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.13e-15;3!UBERON:0003057;1.13e-15;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;2.46e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.69e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-13!57;UBERON:0005068!1.14e-13!57;UBERON:0006241!1.14e-13!57;UBERON:0007135!1.14e-13!57;UBERON:0007023!3.50e-11!115;UBERON:0002616!4.62e-11!59;UBERON:0004121!4.66e-11!169;UBERON:0000924!6.87e-11!173;UBERON:0006601!6.87e-11!173;UBERON:0000153!1.02e-10!129;UBERON:0007811!1.02e-10!129;UBERON:0000033!3.24e-10!123;UBERON:0001017!3.78e-10!82;UBERON:0005743!4.97e-10!86;UBERON:0002780!5.83e-09!41;UBERON:0001890!5.83e-09!41;UBERON:0006240!5.83e-09!41;UBERON:0003080!1.57e-08!42;UBERON:0000073!3.43e-08!94;UBERON:0001016!3.43e-08!94;UBERON:0003075!5.12e-08!86;UBERON:0007284!5.12e-08!86;UBERON:0000955!7.15e-08!69;UBERON:0006238!7.15e-08!69;UBERON:0002346!9.25e-08!90;UBERON:0000062!4.28e-07!511;UBERON:0003076!6.53e-07!15;UBERON:0003057!6.53e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.13e-15;3!UBERON:0005174;1.13e-15;3!UBERON:0001137;1.13e-15;3!UBERON:0002106;5.88e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.17e-16,3;UBERON:0005174,5.17e-16,3;UBERON:0001137,5.17e-16,3;UBERON:0002106,5.90e-08,3;UBERON:0004854,5.90e-08,3;UBERON:0009034,5.90e-08,3;UBERON:0002095,5.90e-08,3;UBERON:0004782,5.90e-08,3;UBERON:0003281,5.90e-08,3;UBERON:0009664,5.90e-08,3;UBERON:0002296,5.90e-08,3;UBERON:0005602,5.90e-08,3;UBERON:0001179,5.90e-08,3;UBERON:0006293,5.90e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.22465726229299,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0.569212969109448,0,1.14681968437569,0,0,0.526768169550154,0,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0.324547393654683,0,0,1.19245312152671,2.85997455390064,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859840221182376,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0.877955241761676,0.612975591598039,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,1.61646056818812,0,0,0,0.57978255948989,0.545492241181669,2.00763216772303,1.34171076742555,0.530119073285941,0.813357600086629,0.310983165046111,0.756962552626885,0,0,0.643240938192885,2.76269842704961,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.658501712451753,1.1240175325762,0.603173834469785,0.740707561268237,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,1.51183915378974,0.425325291727159,2.14940454486836,1.45316969256981,0.383382679165211,0.985326475791887,0.528290604079356,1.65862492432618,1.00883967391873,1.13618190083742,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.434343920002738,0,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.802025881213139,0.460404944679482,0.114814448164607,0,0,0.451199612907412,0.231046011313244,0,0,0.211103257785751,0,0,0.863663664408557,0,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0,0,0.366277859273374,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.768760269460425,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0,0.429374660225974,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0.399158742865633,0,0,0,0.561594356226918,0,0.156679895773023,0,0,0,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0.445773537109913,0,0.47748896947538,0.296964680832639,0.614321404198464,0.994147647766298,0,0.445234820091624,0.988823245360557,0,0,0,0.251932747854276,0,0,0.622079175323615,0.629078458031288,0.895105873378046,0.511572370226872,0.197286811273867,0,0,0,0.185536196323703,0,0.520855522170466,0.349839999984783,0,0.455173793141999,0,0.236387681767936,0,0,0,1.77148277162768,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0.697118721393016,0.384751292518985,0.113942055847001,0.46112780877612,0.269272933229316,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.979396848954886,0.141353071433941,0,0,0.176915129006678,1.22206028986725,0,0,0,1.14581926067151,0,1.63985112007737,0,0,0,0.394584402849391,0,0,0.63186579628488,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0.881931576729399,1.56706571844725,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.253243183823515,0.586654148204409,0.160317640503067,0.426905989478705,0.19980960958213,0.864542502924636,0,0,0,0,1.17847017308398,0,0,0,0,0.600420288709789,0.410716136675979,0,0.859530882839914,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0.643012593860077,1.65047323916681,0.83088067605837,0,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.26446520348538,0,0.704815022316672,0.213574825135389,0,0,0,0,0,2.55336503108073,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.500763722825999,0.573409195690071,0.776503360757966,0.558867626472451,0,0,0,0,0,0,0,0,0,0,1.13641803165053,0,0,0,0,0,0,0,0,0.465788870628778,0,0,0,0,0.380805212168795,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0.172214979660816,2.83757976783418,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.276629009856872,0.161475645631851,0,1.07962490351128,0,1.10057159113007,0.577628330751691,0.381382095467167,0,3.77940822020922,0.526472298444801,0,0,0.523813388962845,0.818859587550484,0.295712172434091,0.135075169236789,0.781078098613847,0.206686796501184,0.126831620387814,0,1.09651553371436,0,3.34155364283279,0.638812138197976,0.535701835878287,0.336283722218824,0.606965604236632,0.682986574053893,0.0887023701626388,0,0.514464028312255,0.203909198930495,0.197318320688547,0,0.444925607568277,0.549451649953598,0,0,0,0.647782773655864,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,3.43660302816075,0,0,0.111855431797792,0.687051635306701,0.121917924982269,0,0,0,0.971421986118279,0,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0.385870790539723,0.218559560503957,2.35158648180761,0,0.235676547101626,2.94462700672418,1.78227840196252,4.6492130034174,0.169927114687817,4.79317981697253,4.38313638220325,0,0.357107877211315,0,0.320965466756673,0,0.917458566809082,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.227336094654718,0,1.65833887891756,0.827463966895162,0.426467963801962,0,0.129177819672012,0.558672428662721,0.560659312903067,0.700118741059814,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.573777643141411,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.22465726229299,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0.569212969109448,0,1.14681968437569,0,0,0.526768169550154,0,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0.324547393654683,0,0,1.19245312152671,2.85997455390064,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859840221182376,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0.877955241761676,0.612975591598039,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,1.61646056818812,0,0,0,0.57978255948989,0.545492241181669,2.00763216772303,1.34171076742555,0.530119073285941,0.813357600086629,0.310983165046111,0.756962552626885,0,0,0.643240938192885,2.76269842704961,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.658501712451753,1.1240175325762,0.603173834469785,0.740707561268237,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,1.51183915378974,0.425325291727159,2.14940454486836,1.45316969256981,0.383382679165211,0.985326475791887,0.528290604079356,1.65862492432618,1.00883967391873,1.13618190083742,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.434343920002738,0,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.802025881213139,0.460404944679482,0.114814448164607,0,0,0.451199612907412,0.231046011313244,0,0,0.211103257785751,0,0,0.863663664408557,0,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0,0,0.366277859273374,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.768760269460425,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0,0.429374660225974,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0.399158742865633,0,0,0,0.561594356226918,0,0.156679895773023,0,0,0,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0.445773537109913,0,0.47748896947538,0.296964680832639,0.614321404198464,0.994147647766298,0,0.445234820091624,0.988823245360557,0,0,0,0.251932747854276,0,0,0.622079175323615,0.629078458031288,0.895105873378046,0.511572370226872,0.197286811273867,0,0,0,0.185536196323703,0,0.520855522170466,0.349839999984783,0,0.455173793141999,0,0.236387681767936,0,0,0,1.77148277162768,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0.697118721393016,0.384751292518985,0.113942055847001,0.46112780877612,0.269272933229316,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.979396848954886,0.141353071433941,0,0,0.176915129006678,1.22206028986725,0,0,0,1.14581926067151,0,1.63985112007737,0,0,0,0.394584402849391,0,0,0.63186579628488,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0.881931576729399,1.56706571844725,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.253243183823515,0.586654148204409,0.160317640503067,0.426905989478705,0.19980960958213,0.864542502924636,0,0,0,0,1.17847017308398,0,0,0,0,0.600420288709789,0.410716136675979,0,0.859530882839914,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0.643012593860077,1.65047323916681,0.83088067605837,0,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.26446520348538,0,0.704815022316672,0.213574825135389,0,0,0,0,0,2.55336503108073,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0.500763722825999,0.573409195690071,0.776503360757966,0.558867626472451,0,0,0,0,0,0,0,0,0,0,1.13641803165053,0,0,0,0,0,0,0,0,0.465788870628778,0,0,0,0,0.380805212168795,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0.172214979660816,2.83757976783418,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.276629009856872,0.161475645631851,0,1.07962490351128,0,1.10057159113007,0.577628330751691,0.381382095467167,0,3.77940822020922,0.526472298444801,0,0,0.523813388962845,0.818859587550484,0.295712172434091,0.135075169236789,0.781078098613847,0.206686796501184,0.126831620387814,0,1.09651553371436,0,3.34155364283279,0.638812138197976,0.535701835878287,0.336283722218824,0.606965604236632,0.682986574053893,0.0887023701626388,0,0.514464028312255,0.203909198930495,0.197318320688547,0,0.444925607568277,0.549451649953598,0,0,0,0.647782773655864,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,3.43660302816075,0,0,0.111855431797792,0.687051635306701,0.121917924982269,0,0,0,0.971421986118279,0,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0.385870790539723,0.218559560503957,2.35158648180761,0,0.235676547101626,2.94462700672418,1.78227840196252,4.6492130034174,0.169927114687817,4.79317981697253,4.38313638220325,0,0.357107877211315,0,0.320965466756673,0,0.917458566809082,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.227336094654718,0,1.65833887891756,0.827463966895162,0.426467963801962,0,0.129177819672012,0.558672428662721,0.560659312903067,0.700118741059814,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.573777643141411,0,0.651226148887796,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@GALNT3 | |||
}} | }} |
Latest revision as of 23:54, 17 September 2015
Short description: | p8@GALNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GALNT3_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_ENST00000392701_5end |
EntrezGene: | GALNT3 |
HGNC: | 4125 |
UniProt: | Q14435 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.07e-15 | 3 |
mast cell | 6.74e-09 | 5 |
basophil mast progenitor cell | 6.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 5.17e-16 | 3 |
dorsal region element | 5.17e-16 | 3 |
dorsum | 5.17e-16 | 3 |
spleen | 5.90e-08 | 3 |
gastrointestinal system mesentery | 5.90e-08 | 3 |
stomach region | 5.90e-08 | 3 |
mesentery | 5.90e-08 | 3 |
gastrointestinal system serosa | 5.90e-08 | 3 |
mesentery of stomach | 5.90e-08 | 3 |
gut mesentery | 5.90e-08 | 3 |
dorsal mesentery | 5.90e-08 | 3 |
dorsal mesogastrium | 5.90e-08 | 3 |
peritoneal cavity | 5.90e-08 | 3 |
spleen primordium | 5.90e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.69e-08 | 14 |