FFCP PHASE1:Mm9::chr1:53841323..53841334,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=420 | |MCL_coexpression_id=420 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:53841323..53841334,+ | |||
|description=CAGE_peak_at_chr1:53841323..53841334,+ | |description=CAGE_peak_at_chr1:53841323..53841334,+ | ||
|id=chr1:53841323..53841334,+ | |id=chr1:53841323..53841334,+ | ||
|ontology_enrichment_celltype=CL:0000063!5.54e-17!66;CL:0000838!2.70e-14!12;CL:0000988!3.25e-14!32;CL:0002032!3.25e-14!32;CL:0000037!3.25e-14!32;CL:0000566!3.25e-14!32;CL:0000837!3.25e-14!32;CL:0002031!9.64e-14!25;CL:0000791!2.47e-13!9;CL:0000789!2.47e-13!9;CL:0002420!2.47e-13!9;CL:0002419!2.47e-13!9;CL:0000790!2.47e-13!9;CL:0000542!5.77e-13!13;CL:0000051!5.77e-13!13;CL:0000084!7.92e-13!11;CL:0000827!7.92e-13!11;CL:0000624!9.97e-12!8;CL:0000738!5.59e-11!17;CL:0002087!5.59e-11!17;CL:0002320!2.04e-10!46;CL:0000134!2.04e-10!46;CL:0000144!4.65e-10!121;CL:0000012!4.65e-10!121;CL:0002563!8.02e-10!9;CL:0002251!8.02e-10!9;CL:0000239!2.57e-09!6;CL:0000677!2.57e-09!6;CL:0000212!2.57e-09!6;CL:0000584!2.57e-09!6;CL:0002371!5.64e-09!118;CL:0000219!8.40e-09!54;CL:0000893!1.22e-08!6;CL:0002489!1.22e-08!6;CL:0000898!1.22e-08!6;CL:0000809!1.22e-08!6;CL:0000810!1.22e-08!6;CL:0000895!1.22e-08!6;CL:0000808!1.22e-08!6;CL:0000894!1.22e-08!6;CL:0000806!1.22e-08!6;CL:0000807!1.22e-08!6;CL:0000805!1.22e-08!6;CL:0002425!1.22e-08!6;CL:0002436!1.22e-08!6;CL:0002427!1.22e-08!6;CL:0002428!1.22e-08!6;CL:0002429!1.22e-08!6;CL:0002433!1.22e-08!6;CL:0002431!1.22e-08!6;CL:0002432!1.22e-08!6;CL:0000075!7.74e-08!7;CL:0000548!4.15e-07!115;CL:0000004!4.15e-07!115;CL:0000255!4.15e-07!115 | |ontology_enrichment_celltype=CL:0000063!5.54e-17!66;CL:0000838!2.70e-14!12;CL:0000988!3.25e-14!32;CL:0002032!3.25e-14!32;CL:0000037!3.25e-14!32;CL:0000566!3.25e-14!32;CL:0000837!3.25e-14!32;CL:0002031!9.64e-14!25;CL:0000791!2.47e-13!9;CL:0000789!2.47e-13!9;CL:0002420!2.47e-13!9;CL:0002419!2.47e-13!9;CL:0000790!2.47e-13!9;CL:0000542!5.77e-13!13;CL:0000051!5.77e-13!13;CL:0000084!7.92e-13!11;CL:0000827!7.92e-13!11;CL:0000624!9.97e-12!8;CL:0000738!5.59e-11!17;CL:0002087!5.59e-11!17;CL:0002320!2.04e-10!46;CL:0000134!2.04e-10!46;CL:0000144!4.65e-10!121;CL:0000012!4.65e-10!121;CL:0002563!8.02e-10!9;CL:0002251!8.02e-10!9;CL:0000239!2.57e-09!6;CL:0000677!2.57e-09!6;CL:0000212!2.57e-09!6;CL:0000584!2.57e-09!6;CL:0002371!5.64e-09!118;CL:0000219!8.40e-09!54;CL:0000893!1.22e-08!6;CL:0002489!1.22e-08!6;CL:0000898!1.22e-08!6;CL:0000809!1.22e-08!6;CL:0000810!1.22e-08!6;CL:0000895!1.22e-08!6;CL:0000808!1.22e-08!6;CL:0000894!1.22e-08!6;CL:0000806!1.22e-08!6;CL:0000807!1.22e-08!6;CL:0000805!1.22e-08!6;CL:0002425!1.22e-08!6;CL:0002436!1.22e-08!6;CL:0002427!1.22e-08!6;CL:0002428!1.22e-08!6;CL:0002429!1.22e-08!6;CL:0002433!1.22e-08!6;CL:0002431!1.22e-08!6;CL:0002432!1.22e-08!6;CL:0000075!7.74e-08!7;CL:0000548!4.15e-07!115;CL:0000004!4.15e-07!115;CL:0000255!4.15e-07!115 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.75e-17,12;CL:0000791,4.12e-16,9;CL:0000789,4.12e-16,9;CL:0002420,4.12e-16,9;CL:0002419,4.12e-16,9;CL:0000790,4.12e-16,9;CL:0000542,1.23e-15,13;CL:0000051,1.23e-15,13;CL:0000239,2.08e-14,6;CL:0000677,2.08e-14,6;CL:0000584,2.08e-14,6;CL:0000084,3.62e-13,11;CL:0000827,3.62e-13,11;CL:0000075,2.17e-12,7;CL:0000738,7.21e-12,17;CL:0002087,7.21e-12,17;CL:0000624,8.12e-12,8;CL:0002563,1.08e-09,9;CL:0002251,1.08e-09,9;CL:0000682,4.26e-08,3;CL:0002031,6.18e-08,25;CL:0000066,2.50e-07,25;CL:0000625,2.75e-07,1;CL:0000815,5.34e-07,1;CL:0000792,5.34e-07,1;CL:0000945,7.89e-07,1;CL:0000236,7.89e-07,1;CL:0000826,7.89e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.61e-08,3;DOID:4045,3.61e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!5.87e-12!15;UBERON:0002384!2.04e-10!46;UBERON:0003350!8.02e-10!9;UBERON:0004808!8.02e-10!9;UBERON:0001277!8.02e-10!9;UBERON:0001242!1.77e-09!13;UBERON:0000060!1.77e-09!13;UBERON:0001262!1.77e-09!13;UBERON:0004786!1.77e-09!13;UBERON:0000485!9.98e-08!11;UBERON:0004923!1.92e-07!24 | |ontology_enrichment_uberon=UBERON:0000344!5.87e-12!15;UBERON:0002384!2.04e-10!46;UBERON:0003350!8.02e-10!9;UBERON:0004808!8.02e-10!9;UBERON:0001277!8.02e-10!9;UBERON:0001242!1.77e-09!13;UBERON:0000060!1.77e-09!13;UBERON:0001262!1.77e-09!13;UBERON:0004786!1.77e-09!13;UBERON:0000485!9.98e-08!11;UBERON:0004923!1.92e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.08e-09,9;UBERON:0004808,1.08e-09,9;UBERON:0001277,1.08e-09,9;UBERON:0000485,5.76e-08,11;UBERON:0001242,9.10e-07,13;UBERON:0001262,9.10e-07,13;UBERON:0004786,9.10e-07,13 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,1.20985684522732,1.50268718983904,1.00727563147134,0.233612640595526,4.00282302668886,0.563154888606667,0.70219357896598,0.171217968225505,0.0797721589953364,7.53283211697305,5.07038334030185,0,0.607425802169478,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,0.0850432901510698,0.297872853602656,0,0.95995453676044,0.91763712426868,1.14846392823004,0.430761996159075,1.29282739611533,0.190023419456374,0,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,2.51118978442145,0.7813353445238,1.0470474879476,8.82347232046521,3.41522742479223,0.971020706062307,0,0,0,0,0,0,0,0,0,2.01339127269284,7.97898356212479,9.74672017513146,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477489376012546,0,0,0,0.170870880797853,0,0,0,0,0,0.509935289981566,0.559805809294632,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.454999239389536,1.20985684522732,1.50268718983904,1.00727563147134,0.233612640595526,4.00282302668886,0.563154888606667,0.70219357896598,0.171217968225505,0.0797721589953364,7.53283211697305,5.07038334030185,0,0.607425802169478,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,0.0850432901510698,0.297872853602656,0,0.95995453676044,0.91763712426868,1.14846392823004,0.430761996159075,1.29282739611533,0.190023419456374,0,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,2.51118978442145,0.7813353445238,1.0470474879476,8.82347232046521,3.41522742479223,0.971020706062307,0,0,0,0,0,0,0,0,0,2.01339127269284,7.97898356212479,9.74672017513146,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477489376012546,0,0,0,0.170870880797853,0,0,0,0,0,0.509935289981566,0.559805809294632,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr1:53841323..53841334,+ | |short_description=p@chr1:53841323..53841334,+ | ||
}} | }} |
Latest revision as of 18:18, 5 August 2015
Short description: | p@chr1:53841323..53841334, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:53841323..53841334, + |
Coexpression cluster: | MCL_coexpression_mm9:420 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.75e-17 | 12 |
mature alpha-beta T cell | 4.12e-16 | 9 |
alpha-beta T cell | 4.12e-16 | 9 |
immature T cell | 4.12e-16 | 9 |
mature T cell | 4.12e-16 | 9 |
immature alpha-beta T cell | 4.12e-16 | 9 |
lymphocyte | 1.23e-15 | 13 |
common lymphoid progenitor | 1.23e-15 | 13 |
brush border epithelial cell | 2.08e-14 | 6 |
gut absorptive cell | 2.08e-14 | 6 |
enterocyte | 2.08e-14 | 6 |
T cell | 3.62e-13 | 11 |
pro-T cell | 3.62e-13 | 11 |
columnar/cuboidal epithelial cell | 2.17e-12 | 7 |
leukocyte | 7.21e-12 | 17 |
nongranular leukocyte | 7.21e-12 | 17 |
CD4-positive, alpha-beta T cell | 8.12e-12 | 8 |
intestinal epithelial cell | 1.08e-09 | 9 |
epithelial cell of alimentary canal | 1.08e-09 | 9 |
M cell of gut | 4.26e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 6.18e-08 | 25 |
epithelial cell | 2.50e-07 | 25 |
CD8-positive, alpha-beta T cell | 2.75e-07 | 1 |
regulatory T cell | 5.34e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.34e-07 | 1 |
lymphocyte of B lineage | 7.89e-07 | 1 |
B cell | 7.89e-07 | 1 |
pro-B cell | 7.89e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.08e-09 | 9 |
gastrointestinal system epithelium | 1.08e-09 | 9 |
intestinal epithelium | 1.08e-09 | 9 |
simple columnar epithelium | 5.76e-08 | 11 |
intestinal mucosa | 9.10e-07 | 13 |
wall of intestine | 9.10e-07 | 13 |
gastrointestinal system mucosa | 9.10e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.61e-08 | 3 |
muscle cancer | 3.61e-08 | 3 |