FFCP PHASE1:Mm9::chr12:90284364..90284369,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=538 | |MCL_coexpression_id=538 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:90284364..90284369,+ | |||
|description=CAGE_peak_at_chr12:90284364..90284369,+ | |description=CAGE_peak_at_chr12:90284364..90284369,+ | ||
|id=chr12:90284364..90284369,+ | |id=chr12:90284364..90284369,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.26e-12!63;UBERON:0003056!1.37e-10!49;UBERON:0002346!4.81e-10!71;UBERON:0003075!4.81e-10!71;UBERON:0007284!4.81e-10!71;UBERON:0000955!1.29e-09!50;UBERON:0006238!1.29e-09!50;UBERON:0002021!3.61e-09!10;UBERON:0000411!3.61e-09!10;UBERON:0001950!3.61e-09!10;UBERON:0001049!4.88e-09!52;UBERON:0005068!4.88e-09!52;UBERON:0006241!4.88e-09!52;UBERON:0007135!4.88e-09!52;UBERON:0002616!5.33e-09!49;UBERON:0001017!1.40e-07!73;UBERON:0005743!1.40e-07!73;UBERON:0000073!2.95e-07!75;UBERON:0001016!2.95e-07!75;UBERON:0003080!3.62e-07!40;UBERON:0004121!4.96e-07!102;UBERON:0000924!4.96e-07!102;UBERON:0006601!4.96e-07!102;UBERON:0002619!5.41e-07!17;UBERON:0002780!9.75e-07!39;UBERON:0001890!9.75e-07!39;UBERON:0006240!9.75e-07!39 | |ontology_enrichment_uberon=UBERON:0000033!1.26e-12!63;UBERON:0003056!1.37e-10!49;UBERON:0002346!4.81e-10!71;UBERON:0003075!4.81e-10!71;UBERON:0007284!4.81e-10!71;UBERON:0000955!1.29e-09!50;UBERON:0006238!1.29e-09!50;UBERON:0002021!3.61e-09!10;UBERON:0000411!3.61e-09!10;UBERON:0001950!3.61e-09!10;UBERON:0001049!4.88e-09!52;UBERON:0005068!4.88e-09!52;UBERON:0006241!4.88e-09!52;UBERON:0007135!4.88e-09!52;UBERON:0002616!5.33e-09!49;UBERON:0001017!1.40e-07!73;UBERON:0005743!1.40e-07!73;UBERON:0000073!2.95e-07!75;UBERON:0001016!2.95e-07!75;UBERON:0003080!3.62e-07!40;UBERON:0004121!4.96e-07!102;UBERON:0000924!4.96e-07!102;UBERON:0006601!4.96e-07!102;UBERON:0002619!5.41e-07!17;UBERON:0002780!9.75e-07!39;UBERON:0001890!9.75e-07!39;UBERON:0006240!9.75e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.75e-16,10;UBERON:0000411,3.75e-16,10;UBERON:0001950,3.75e-16,10;UBERON:0002346,2.38e-14,64;UBERON:0003075,2.38e-14,64;UBERON:0007284,2.38e-14,64;UBERON:0003056,8.29e-13,49;UBERON:0010371,1.93e-12,73;UBERON:0000955,5.46e-12,47;UBERON:0006238,5.46e-12,47;UBERON:0002616,5.76e-11,46;UBERON:0004121,1.49e-10,95;UBERON:0000924,1.49e-10,95;UBERON:0006601,1.49e-10,95;UBERON:0002619,3.70e-10,17;UBERON:0000073,4.07e-10,54;UBERON:0001049,7.13e-10,52;UBERON:0005068,7.13e-10,52;UBERON:0006241,7.13e-10,52;UBERON:0007135,7.13e-10,52;UBERON:0001017,1.07e-09,73;UBERON:0000956,3.10e-09,21;UBERON:0001869,3.10e-09,21;UBERON:0000203,3.10e-09,21;UBERON:0001016,3.14e-09,75;UBERON:0003528,3.32e-09,29;UBERON:0002791,3.32e-09,29;UBERON:0001893,3.32e-09,29;UBERON:0003080,1.73e-08,40;UBERON:0010314,4.35e-08,92;UBERON:0002780,8.61e-08,39;UBERON:0001890,8.61e-08,39;UBERON:0006240,8.61e-08,39;UBERON:0002020,3.06e-07,34 | |||
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| ||
|short_description=p@chr12:90284364..90284369,+ | |short_description=p@chr12:90284364..90284369,+ | ||
}} | }} |
Latest revision as of 11:18, 5 August 2015
Short description: | p@chr12:90284364..90284369, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:90284364..90284369, + |
Coexpression cluster: | MCL_coexpression_mm9:538 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.75e-16 | 10 |
visual cortex | 3.75e-16 | 10 |
neocortex | 3.75e-16 | 10 |
neurectoderm | 2.38e-14 | 64 |
neural plate | 2.38e-14 | 64 |
presumptive neural plate | 2.38e-14 | 64 |
pre-chordal neural plate | 8.29e-13 | 49 |
ecto-epithelium | 1.93e-12 | 73 |
brain | 5.46e-12 | 47 |
future brain | 5.46e-12 | 47 |
regional part of brain | 5.76e-11 | 46 |
ectoderm-derived structure | 1.49e-10 | 95 |
ectoderm | 1.49e-10 | 95 |
presumptive ectoderm | 1.49e-10 | 95 |
regional part of cerebral cortex | 3.70e-10 | 17 |
regional part of nervous system | 4.07e-10 | 54 |
neural tube | 7.13e-10 | 52 |
neural rod | 7.13e-10 | 52 |
future spinal cord | 7.13e-10 | 52 |
neural keel | 7.13e-10 | 52 |
central nervous system | 1.07e-09 | 73 |
cerebral cortex | 3.10e-09 | 21 |
cerebral hemisphere | 3.10e-09 | 21 |
pallium | 3.10e-09 | 21 |
nervous system | 3.14e-09 | 75 |
brain grey matter | 3.32e-09 | 29 |
regional part of telencephalon | 3.32e-09 | 29 |
telencephalon | 3.32e-09 | 29 |
anterior neural tube | 1.73e-08 | 40 |
structure with developmental contribution from neural crest | 4.35e-08 | 92 |
regional part of forebrain | 8.61e-08 | 39 |
forebrain | 8.61e-08 | 39 |
future forebrain | 8.61e-08 | 39 |
gray matter | 3.06e-07 | 34 |