FFCP PHASE1:Hg19::chr2:16082395..16082415,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:16082395..16082415,+
|short_description=p6@MYCN
|description=CAGE_peak_6_at_MYCN_5end
|association_with_transcript=208bp_to_AB464743,BT007384_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4613 | |EntrezGene=4613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7559 | |HGNC=7559 | ||
|TSSclassifier=strong | |||
|UniProt=Q53XS5 | |UniProt=Q53XS5 | ||
|association_with_transcript=208bp_to_AB464743,BT007384_5end | |||
|cluster_id=chr2:16082395..16082415,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_6_at_MYCN_5end | |||
|id=chr2:16082395..16082415,+ | |||
|ontology_enrichment_celltype=CL:0000133!4.90e-08!59;CL:0000039!6.92e-08!7;CL:0000586!6.92e-08!7;CL:0000047!3.00e-07!8;CL:0002322!7.60e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.64e-89;5!CL:0002321;1.81e-30;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.24e-19,41;CL:0000133,7.99e-14,59;CL:0000221,1.50e-11,72 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.12e-17;3!CL:0000221;1.40e-09;72!CL:0000133;1.81e-08;59 | |||
|ontology_enrichment_disease=DOID:3095!2.17e-11!22;DOID:2994!2.17e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:169;2.58e-74;6!DOID:171;4.18e-45;10!DOID:3095;3.99e-21;22!DOID:2994;3.99e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.58e-74,6;DOID:171,4.18e-45,10;DOID:3095,3.99e-21,22;DOID:2994,3.99e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.84e-15!94;UBERON:0001016!1.84e-15!94;UBERON:0005743!7.89e-13!86;UBERON:0001017!2.77e-12!82;UBERON:0003056!1.80e-11!61;UBERON:0002346!6.76e-11!90;UBERON:0000924!1.07e-10!173;UBERON:0006601!1.07e-10!173;UBERON:0003075!2.51e-10!86;UBERON:0007284!2.51e-10!86;UBERON:0004121!3.72e-10!169;UBERON:0001869!5.90e-10!32;UBERON:0000955!2.26e-09!69;UBERON:0006238!2.26e-09!69;UBERON:0001893!2.94e-09!34;UBERON:0001950!5.42e-09!20;UBERON:0000956!6.08e-09!25;UBERON:0000203!6.08e-09!25;UBERON:0002780!7.17e-09!41;UBERON:0001890!7.17e-09!41;UBERON:0006240!7.17e-09!41;UBERON:0003080!1.32e-08!42;UBERON:0002619!4.29e-08!22;UBERON:0001049!5.41e-08!57;UBERON:0005068!5.41e-08!57;UBERON:0006241!5.41e-08!57;UBERON:0007135!5.41e-08!57;UBERON:0002791!5.84e-08!33;UBERON:0002020!1.12e-07!34;UBERON:0003528!1.12e-07!34;UBERON:0002616!1.26e-07!59;UBERON:0000013!2.19e-07!5;UBERON:0002410!2.19e-07!5;UBERON:0000153!8.90e-07!129;UBERON:0007811!8.90e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;6.64e-89;5!UBERON:0002410;6.64e-89;5!UBERON:0000010;5.60e-50;8!UBERON:0000966;3.60e-11;5!UBERON:0005388;3.60e-11;5!UBERON:0001802;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.64e-89,5;UBERON:0002410,6.64e-89,5;UBERON:0000010,5.60e-50,8;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6;UBERON:0001016,1.88e-09,89 | |||
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| ||
|short_description=p6@MYCN | |||
}} | }} |
Latest revision as of 19:24, 17 September 2015
Short description: | p6@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 208bp_to_AB464743, BT007384_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | Q53XS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 3.24e-19 | 41 |
neurectodermal cell | 7.99e-14 | 59 |
ectodermal cell | 1.50e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.64e-89 | 5 |
autonomic nervous system | 6.64e-89 | 5 |
peripheral nervous system | 5.60e-50 | 8 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.58e-74 | 6 |
neuroectodermal tumor | 4.18e-45 | 10 |
germ cell and embryonal cancer | 3.99e-21 | 22 |
germ cell cancer | 3.99e-21 | 22 |