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FFCP PHASE1:Mm9::chr11:115885803..115885825,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15078,15081,623365,625328,627371,636952,638008,667250
|EntrezGene=15078,15081,623365,625328,627371,636952,638008,667250
|HGNC=
|HGNC=
|MCL_coexpression_id=1551
|MCL_coexpression_id=1551
|TSSclassifier=NA
|UniProt=P84244,A2A852
|UniProt=P84244,A2A852
|association_with_transcript=0bp_to_ENSMUST00000016703,NM_008211,uc007mjo.1_5end
|association_with_transcript=0bp_to_ENSMUST00000016703,NM_008211,uc007mjo.1_5end
|cluster_id=chr11:115885803..115885825,-
|description=CAGE_peak_2_at_Gm12657_5end,CAGE_peak_2_at_Gm6421_5end,CAGE_peak_2_at_Gm6749_5end,CAGE_peak_2_at_Gm7194_5end,CAGE_peak_2_at_Gm7227_5end,CAGE_peak_2_at_H3f3a_5end,CAGE_peak_2_at_H3f3b_5end,CAGE_peak_2_at_H3f3c_5end
|description=CAGE_peak_2_at_Gm12657_5end,CAGE_peak_2_at_Gm6421_5end,CAGE_peak_2_at_Gm6749_5end,CAGE_peak_2_at_Gm7194_5end,CAGE_peak_2_at_Gm7227_5end,CAGE_peak_2_at_H3f3a_5end,CAGE_peak_2_at_H3f3b_5end,CAGE_peak_2_at_H3f3c_5end
|id=chr11:115885803..115885825,-
|id=chr11:115885803..115885825,-
|ontology_enrichment_celltype=CL:0000144!3.30e-19!121;CL:0000012!3.30e-19!121;CL:0000063!1.42e-17!66;CL:0002371!1.98e-17!118;CL:0000548!5.51e-16!115;CL:0000004!5.51e-16!115;CL:0000255!5.51e-16!115;CL:0000034!2.94e-14!97;CL:0000723!1.78e-11!91;CL:0000048!1.78e-11!91;CL:0000988!7.20e-11!32;CL:0002032!7.20e-11!32;CL:0000037!7.20e-11!32;CL:0000566!7.20e-11!32;CL:0000837!7.20e-11!32;CL:0002320!8.03e-10!46;CL:0000134!8.03e-10!46;CL:0000066!1.63e-08!25;CL:0000219!5.66e-08!54;CL:0002031!7.50e-08!25;CL:0000838!2.21e-07!12;CL:0000542!4.53e-07!13;CL:0000051!4.53e-07!13;CL:0000738!6.03e-07!17;CL:0002087!6.03e-07!17;CL:0000084!9.98e-07!11;CL:0000827!9.98e-07!11
|ontology_enrichment_celltype=CL:0000144!3.30e-19!121;CL:0000012!3.30e-19!121;CL:0000063!1.42e-17!66;CL:0002371!1.98e-17!118;CL:0000548!5.51e-16!115;CL:0000004!5.51e-16!115;CL:0000255!5.51e-16!115;CL:0000034!2.94e-14!97;CL:0000723!1.78e-11!91;CL:0000048!1.78e-11!91;CL:0000988!7.20e-11!32;CL:0002032!7.20e-11!32;CL:0000037!7.20e-11!32;CL:0000566!7.20e-11!32;CL:0000837!7.20e-11!32;CL:0002320!8.03e-10!46;CL:0000134!8.03e-10!46;CL:0000066!1.63e-08!25;CL:0000219!5.66e-08!54;CL:0002031!7.50e-08!25;CL:0000838!2.21e-07!12;CL:0000542!4.53e-07!13;CL:0000051!4.53e-07!13;CL:0000738!6.03e-07!17;CL:0002087!6.03e-07!17;CL:0000084!9.98e-07!11;CL:0000827!9.98e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000034,6.03e-19,97;CL:0000988,9.83e-18,32;CL:0002032,9.83e-18,32;CL:0000037,9.83e-18,32;CL:0000837,9.83e-18,32;CL:0002320,6.21e-17,46;CL:0000134,6.21e-17,46;CL:0000219,2.84e-15,54;CL:0000066,1.40e-14,25;CL:0000723,1.99e-14,91;CL:0000048,1.99e-14,91;CL:0002031,7.23e-14,25;CL:0002076,1.62e-11,15;CL:0000838,1.63e-11,12;CL:0000791,1.10e-10,9;CL:0000789,1.10e-10,9;CL:0002420,1.10e-10,9;CL:0002419,1.10e-10,9;CL:0000790,1.10e-10,9;CL:0000223,1.36e-10,20;CL:0000542,2.27e-10,13;CL:0000051,2.27e-10,13;CL:0000084,2.55e-10,11;CL:0000827,2.55e-10,11;CL:0000738,5.00e-10,17;CL:0002087,5.00e-10,17;CL:0000624,9.59e-10,8;CL:0000049,8.99e-09,19;CL:0002563,3.33e-08,9;CL:0002251,3.33e-08,9;CL:0000893,9.07e-08,6;CL:0002489,9.07e-08,6;CL:0000898,9.07e-08,6;CL:0000809,9.07e-08,6;CL:0000810,9.07e-08,6;CL:0000895,9.07e-08,6;CL:0000808,9.07e-08,6;CL:0000894,9.07e-08,6;CL:0000806,9.07e-08,6;CL:0000807,9.07e-08,6;CL:0000805,9.07e-08,6;CL:0002425,9.07e-08,6;CL:0002436,9.07e-08,6;CL:0002427,9.07e-08,6;CL:0002428,9.07e-08,6;CL:0002429,9.07e-08,6;CL:0002433,9.07e-08,6;CL:0002431,9.07e-08,6;CL:0002432,9.07e-08,6;CL:0000075,3.01e-07,7
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!8.03e-10!46
|ontology_enrichment_uberon=UBERON:0002384!8.03e-10!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.21e-17,46;UBERON:0000344,1.12e-11,15;UBERON:0000485,7.02e-10,11;UBERON:0001242,9.30e-10,13;UBERON:0001262,9.30e-10,13;UBERON:0004786,9.30e-10,13;UBERON:0003350,3.33e-08,9;UBERON:0004808,3.33e-08,9;UBERON:0001277,3.33e-08,9
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84,0.386379188064381,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,3.09335728218638,1.37016503954128,0,0.675022500231806,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.37456602987953,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0,0,0.309873682371932,0.385813221962283,0.499621155875892,0.701794825336225,0.214871054048298,0.765153328275374,0,0.463735671240843
|phase1_expression=14.4133962394315,12.2141392673776,12.739978702907,13.3084252975005,26.0465779572101,10.4085148585372,26.1646157466989,20.5306084272106,47.0234331986567,45.6425826327887,32.3601959946204,13.5612670292072,22.5984963509192,17.8337620934755,0.333109761815663,23.4871310172198,30.7807226376385,23.9751245672261,19.6073640056206,29.7072756258621,0.255129870453209,0.496454756004426,22.7243816550874,21.1189998087297,25.4644301984559,15.5042630311055,14.2151458732495,12.9282739611533,29.453630015738,13.8616571367962,13.3038306393183,5.08024538767705,0,0,8.08784535303569,8.81043620400009,6.32925004413344,12.1374172913703,25.7840663692854,14.6586648312664,35.8821207698919,19.1252735788365,13.5942898848723,0.377690453926732,0.405507724878058,0.550640256485045,0,0.218025156380447,0.659058548203415,0,0.139986421625363,0,42.616781938665,26.1130371124084,21.8460969442602,0.257259436035947,0,0.515672092277442,2.02316460859598,0,1.26766280701236,0,0.889294796111139,0,2.96659908770092,0,0.898800331555214,0,0.725827286159344,0.540023753326763,1.47227472945967,0.285650984403804,0.441737081903227,1.71487118900936,0.766763768145891,0,3.30347642998166,0.510749352340751,0.307213066512487,1.97829431595291,0.640413505216868,0.52091337055676,0.279182999001381,0.56276261003168,0,0.294628585473668,0.569486723196412,1.4911955666024,14.9937862799704,13.6784523793282,57.1033042742305,24.9522924324602,2.719885334831,0.539703191637817,0.649776417447669,0,0.140444420131752,0.170430322578058,12.7295142255406,11.3068663843309,17.7462708918617,14.115912515575,0,7.11066703153331,30.5252367825812,23.8158273546593,19.2099289105618,0.22836775943812,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0.741584903203122,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.878342391034642,0.209446706813455,0.255457055208591,25.0413610217373,74.987841374176,28.4637308643665,0,0,0.628271760564322,0.173824320192276,0.255715457330331,0,0.162241263067758,0.81471491080253,0.124406970610093,0,1.05220927943237,0.910843100738926,0.459804208866946,0.540186389416048,0.150704817835715,0.544291993210623,0.640568601424249,0.749613796477831,0.517406741478031,0.646703978798527,0.756424320671277,0.527853372491847,0.657587197282725,0,0.348252166522167,0.205782136407943,0.59710280045548,43.5372176134206,78.2337637628734,0.852490498186778,0,0,0,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,0.134206418760372,0,0.720332286654991,0,1.05780226665418,0.426576501070468,0.464473343720877,0.257734922644187,0,0.444756087689741,0.380451252225118,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0.296452627087149,0.500535317148282,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0,0.810676133875177,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0.568474235311454,0.325929952884052,0.169745085775188,0.704070744865506,0.335012514883631,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.491589944147214,0.172684981865896,0.723245292907558,15.0791283939272,11.9659250440116,0.491764273019036,0.275936746304732,0.321101179975584,0.234423373184406,1.14754461763673,0.252470927204373,0.631016438832513,0,0.215423397732799,1.43381278771531,0.891194696329576,0,0.404810701674894,1.46127928955656,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.754420319023592,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.646793418913773,0.643011105094777,0.532020700926821,0.535106452806212,0.329098041204242,0.304464949114599,0.23467170806371,0.847328283455281,0.220528398054962,0.16488625294148,0.161464426695906,0.180938774784468,0.477489376012546,0.328281799490123,1.1659233465194,0.18542530201051,0.170870880797853,0.619160603889667,0,0.565105371014073,0.136694227721025,0.457556346413045,26.3466566490476,29.2498535356445,29.1601944727334,0,0.790839983952838,0.406638934253697,0.432021363287205,0,0.87345025498471,0.404593039154462,0.41326727862668,0.26175594198403,0.648074866458964,1.24267862617385,1.12738587736838,0.149516546043979,0.165458490457098,0.972255941720238,0.774958940866387,0.337912250981556,0.821500670520278,0.5208175393758,0.314578033277133,0.483168241652012,2.01621004380506,0,0.202725215290164,0.205421914329655,0.51968329191118,0.537080087002444,0.79472541912506,0.240390899039938,0.147689527174577,0.302899349844443,0.381034033274999,0.907435666231565,0.194915761479505,0.577271049841977,0.467507608726276,0.453460767230423,26.6383144048878,11.9319429290603,8.22634620183984,0.386379188064381,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,3.09335728218638,1.37016503954128,0,0.675022500231806,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.37456602987953,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0,0,0.309873682371932,0.385813221962283,0.499621155875892,0.701794825336225,0.214871054048298,0.765153328275374,0,0.463735671240843
|short_description=p2@Gm12657,p2@Gm6421,p2@Gm6749,p2@Gm7194,p2@Gm7227,p2@H3f3a,p2@H3f3b,p2@H3f3c
|short_description=p2@Gm12657,p2@Gm6421,p2@Gm6749,p2@Gm7194,p2@Gm7227,p2@H3f3a,p2@H3f3b,p2@H3f3c
}}
}}

Latest revision as of 23:43, 26 September 2015

Short description:p2@Gm12657, p2@Gm6421, p2@Gm6749, p2@Gm7194, p2@Gm7227, p2@H3f3a, p2@H3f3b, p2@H3f3c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gm12657_5end, CAGE_peak_2_at_Gm6421_5end, CAGE_peak_2_at_Gm6749_5end, CAGE_peak_2_at_Gm7194_5end, CAGE_peak_2_at_Gm7227_5end, CAGE_peak_2_at_H3f3a_5end, CAGE_peak_2_at_H3f3b_5end, CAGE_peak_2_at_H3f3c_5end
Coexpression cluster:MCL_coexpression_mm9:1551
Association with transcript: 0bp_to_ENSMUST00000016703, NM_008211, uc007mjo.1_5end
EntrezGene:15078,15081,623365,625328,627371,636952,638008,667250
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gm12657p2@Gm6421p2@Gm6749p2@Gm7194p2@Gm7227p2@H3f3ap2@H3f3bp2@H3f3c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.41
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I826.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E747.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F245.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E632.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F113.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.83
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.49
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.71
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I922.72
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.46
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I212.93
Ileum epithelium, pool1.CNhs13199.10252-104B929.45
Ileum epithelium, pool2.CNhs13232.10253-104C113.86
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G935.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A242.62
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.11
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A121.85
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D914.99
Mouse Schwann, donor2.CNhs12573.11746-123F913.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G357.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G223.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.21
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D174.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.46
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C843.54
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D278.23
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.97
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C626.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C929.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.16
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.64
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.93
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.23
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
stem cell6.03e-1997
hematopoietic cell9.83e-1832
hematopoietic oligopotent progenitor cell9.83e-1832
hematopoietic stem cell9.83e-1832
hematopoietic multipotent progenitor cell9.83e-1832
connective tissue cell6.21e-1746
mesenchymal cell6.21e-1746
motile cell2.84e-1554
epithelial cell1.40e-1425
somatic stem cell1.99e-1491
multi fate stem cell1.99e-1491
hematopoietic lineage restricted progenitor cell7.23e-1425
endo-epithelial cell1.62e-1115
lymphoid lineage restricted progenitor cell1.63e-1112
mature alpha-beta T cell1.10e-109
alpha-beta T cell1.10e-109
immature T cell1.10e-109
mature T cell1.10e-109
immature alpha-beta T cell1.10e-109
endodermal cell1.36e-1020
lymphocyte2.27e-1013
common lymphoid progenitor2.27e-1013
T cell2.55e-1011
pro-T cell2.55e-1011
leukocyte5.00e-1017
nongranular leukocyte5.00e-1017
CD4-positive, alpha-beta T cell9.59e-108
common myeloid progenitor8.99e-0919
intestinal epithelial cell3.33e-089
epithelial cell of alimentary canal3.33e-089
thymocyte9.07e-086
double negative thymocyte9.07e-086
naive T cell9.07e-086
double-positive, alpha-beta thymocyte9.07e-086
CD4-positive, alpha-beta thymocyte9.07e-086
naive thymus-derived CD4-positive, alpha-beta T cell9.07e-086
DN4 thymocyte9.07e-086
DN1 thymic pro-T cell9.07e-086
DN2 thymocyte9.07e-086
DN3 thymocyte9.07e-086
immature single positive thymocyte9.07e-086
early T lineage precursor9.07e-086
mature CD4 single-positive thymocyte9.07e-086
resting double-positive thymocyte9.07e-086
double-positive blast9.07e-086
CD69-positive double-positive thymocyte9.07e-086
CD69-positive, CD4-positive single-positive thymocyte9.07e-086
CD4-positive, CD8-intermediate double-positive thymocyte9.07e-086
CD24-positive, CD4 single-positive thymocyte9.07e-086
columnar/cuboidal epithelial cell3.01e-077
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