FFCP PHASE1:Mm9::chrX:72341224..72341261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=245474 | |EntrezGene=245474 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=361 | |MCL_coexpression_id=361 | ||
|TSSclassifier=NA | |||
|UniProt=Q9ESX5 | |UniProt=Q9ESX5 | ||
|association_with_transcript=31bp_to_ENSMUST00000033776,NM_001030307,uc009tpo.2_5end | |association_with_transcript=31bp_to_ENSMUST00000033776,NM_001030307,uc009tpo.2_5end | ||
|cluster_id=chrX:72341224..72341261,+ | |||
|description=CAGE_peak_2_at_Dkc1_5end | |description=CAGE_peak_2_at_Dkc1_5end | ||
|id=chrX:72341224..72341261,+ | |id=chrX:72341224..72341261,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.30e-11!23;CL:0000337!9.30e-11!23;CL:0000540!1.77e-08!33;CL:0000047!1.77e-08!33;CL:0000031!1.77e-08!33;CL:0000404!1.77e-08!33 | |ontology_enrichment_celltype=CL:0000117!9.30e-11!23;CL:0000337!9.30e-11!23;CL:0000540!1.77e-08!33;CL:0000047!1.77e-08!33;CL:0000031!1.77e-08!33;CL:0000404!1.77e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.99e-11,23;CL:0000337,4.99e-11,23;CL:0000540,1.44e-08,33;CL:0000047,1.44e-08,33;CL:0000031,1.44e-08,33;CL:0000404,1.44e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.31e-22!63;UBERON:0002346!1.23e-21!71;UBERON:0003075!1.23e-21!71;UBERON:0007284!1.23e-21!71;UBERON:0003056!1.91e-19!49;UBERON:0001049!2.14e-19!52;UBERON:0005068!2.14e-19!52;UBERON:0006241!2.14e-19!52;UBERON:0007135!2.14e-19!52;UBERON:0000955!3.22e-19!50;UBERON:0006238!3.22e-19!50;UBERON:0002616!1.37e-18!49;UBERON:0001017!2.05e-18!73;UBERON:0005743!2.05e-18!73;UBERON:0004121!2.66e-18!102;UBERON:0000924!2.66e-18!102;UBERON:0006601!2.66e-18!102;UBERON:0000073!1.63e-17!75;UBERON:0001016!1.63e-17!75;UBERON:0003080!1.04e-15!40;UBERON:0002020!4.48e-15!34;UBERON:0002780!4.92e-15!39;UBERON:0001890!4.92e-15!39;UBERON:0006240!4.92e-15!39;UBERON:0000153!9.58e-15!94;UBERON:0007811!9.36e-14!86;UBERON:0002791!3.02e-13!29;UBERON:0003528!3.02e-13!29;UBERON:0001893!3.02e-13!29;UBERON:0004111!5.50e-12!122;UBERON:0000025!1.96e-11!114;UBERON:0000956!4.09e-09!21;UBERON:0001869!4.09e-09!21;UBERON:0000203!4.09e-09!21;UBERON:0000468!1.42e-08!333;UBERON:0002619!1.04e-07!17;UBERON:0000475!1.47e-07!200;UBERON:0000477!9.91e-07!154 | |ontology_enrichment_uberon=UBERON:0000033!1.31e-22!63;UBERON:0002346!1.23e-21!71;UBERON:0003075!1.23e-21!71;UBERON:0007284!1.23e-21!71;UBERON:0003056!1.91e-19!49;UBERON:0001049!2.14e-19!52;UBERON:0005068!2.14e-19!52;UBERON:0006241!2.14e-19!52;UBERON:0007135!2.14e-19!52;UBERON:0000955!3.22e-19!50;UBERON:0006238!3.22e-19!50;UBERON:0002616!1.37e-18!49;UBERON:0001017!2.05e-18!73;UBERON:0005743!2.05e-18!73;UBERON:0004121!2.66e-18!102;UBERON:0000924!2.66e-18!102;UBERON:0006601!2.66e-18!102;UBERON:0000073!1.63e-17!75;UBERON:0001016!1.63e-17!75;UBERON:0003080!1.04e-15!40;UBERON:0002020!4.48e-15!34;UBERON:0002780!4.92e-15!39;UBERON:0001890!4.92e-15!39;UBERON:0006240!4.92e-15!39;UBERON:0000153!9.58e-15!94;UBERON:0007811!9.36e-14!86;UBERON:0002791!3.02e-13!29;UBERON:0003528!3.02e-13!29;UBERON:0001893!3.02e-13!29;UBERON:0004111!5.50e-12!122;UBERON:0000025!1.96e-11!114;UBERON:0000956!4.09e-09!21;UBERON:0001869!4.09e-09!21;UBERON:0000203!4.09e-09!21;UBERON:0000468!1.42e-08!333;UBERON:0002619!1.04e-07!17;UBERON:0000475!1.47e-07!200;UBERON:0000477!9.91e-07!154 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.79e-24,64;UBERON:0003075,6.79e-24,64;UBERON:0007284,6.79e-24,64;UBERON:0010314,9.80e-24,92;UBERON:0010371,3.14e-22,73;UBERON:0000073,3.97e-21,54;UBERON:0001049,7.04e-20,52;UBERON:0005068,7.04e-20,52;UBERON:0006241,7.04e-20,52;UBERON:0007135,7.04e-20,52;UBERON:0003056,1.05e-19,49;UBERON:0004121,3.74e-19,95;UBERON:0000924,3.74e-19,95;UBERON:0006601,3.74e-19,95;UBERON:0001017,5.94e-19,73;UBERON:0001016,6.68e-18,75;UBERON:0000955,7.80e-18,47;UBERON:0006238,7.80e-18,47;UBERON:0002616,3.34e-17,46;UBERON:0003080,7.24e-16,40;UBERON:0002020,1.79e-15,34;UBERON:0002780,3.57e-15,39;UBERON:0001890,3.57e-15,39;UBERON:0006240,3.57e-15,39;UBERON:0003528,1.37e-13,29;UBERON:0002791,1.37e-13,29;UBERON:0001893,1.37e-13,29;UBERON:0004111,1.72e-11,122;UBERON:0000025,4.62e-11,114;UBERON:0000956,2.45e-09,21;UBERON:0001869,2.45e-09,21;UBERON:0000203,2.45e-09,21;UBERON:0002619,6.86e-08,17 | |||
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| ||
|short_description=p2@Dkc1 | |short_description=p2@Dkc1 | ||
}} | }} |
Latest revision as of 00:27, 2 October 2015
Short description: | p2@Dkc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dkc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:361 |
Association with transcript: | 31bp_to_ENSMUST00000033776, NM_001030307, uc009tpo.2_5end |
EntrezGene: | Dkc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.99e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.99e-11 | 23 |
neuron | 1.44e-08 | 33 |
neuronal stem cell | 1.44e-08 | 33 |
neuroblast | 1.44e-08 | 33 |
electrically signaling cell | 1.44e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 6.79e-24 | 64 |
neural plate | 6.79e-24 | 64 |
presumptive neural plate | 6.79e-24 | 64 |
structure with developmental contribution from neural crest | 9.80e-24 | 92 |
ecto-epithelium | 3.14e-22 | 73 |
regional part of nervous system | 3.97e-21 | 54 |
neural tube | 7.04e-20 | 52 |
neural rod | 7.04e-20 | 52 |
future spinal cord | 7.04e-20 | 52 |
neural keel | 7.04e-20 | 52 |
pre-chordal neural plate | 1.05e-19 | 49 |
ectoderm-derived structure | 3.74e-19 | 95 |
ectoderm | 3.74e-19 | 95 |
presumptive ectoderm | 3.74e-19 | 95 |
central nervous system | 5.94e-19 | 73 |
nervous system | 6.68e-18 | 75 |
brain | 7.80e-18 | 47 |
future brain | 7.80e-18 | 47 |
regional part of brain | 3.34e-17 | 46 |
anterior neural tube | 7.24e-16 | 40 |
gray matter | 1.79e-15 | 34 |
regional part of forebrain | 3.57e-15 | 39 |
forebrain | 3.57e-15 | 39 |
future forebrain | 3.57e-15 | 39 |
brain grey matter | 1.37e-13 | 29 |
regional part of telencephalon | 1.37e-13 | 29 |
telencephalon | 1.37e-13 | 29 |
anatomical conduit | 1.72e-11 | 122 |
tube | 4.62e-11 | 114 |
cerebral cortex | 2.45e-09 | 21 |
cerebral hemisphere | 2.45e-09 | 21 |
pallium | 2.45e-09 | 21 |
regional part of cerebral cortex | 6.86e-08 | 17 |