FFCP PHASE1:Hg19::chr2:157186607..157186620,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:157186607..157186620,-
|short_description=p13@NR4A2
|description=CAGE_peak_13_at_NR4A2_5end
|association_with_transcript=77bp_to_HQ692824,HQ709176_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4929 | |EntrezGene=4929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7981 | |HGNC=7981 | ||
|TSSclassifier=strong | |||
|UniProt=F1D8N6,F1DAL2 | |UniProt=F1D8N6,F1DAL2 | ||
|association_with_transcript=77bp_to_HQ692824,HQ709176_5end | |||
|cluster_id=chr2:157186607..157186620,- | |||
|coexpression_cluster_id=C1881 | |||
|description=CAGE_peak_13_at_NR4A2_5end | |||
|id=chr2:157186607..157186620,- | |||
|ontology_enrichment_celltype=CL:0000860!4.80e-26!45;CL:0002057!1.17e-25!42;CL:0000766!3.52e-21!76;CL:0000738!3.63e-21!140;CL:0000557!1.46e-19!71;CL:0002031!8.89e-18!124;CL:0000839!2.81e-17!70;CL:0002009!1.22e-16!65;CL:0002087!1.05e-15!119;CL:0002194!7.31e-15!63;CL:0000576!7.31e-15!63;CL:0000040!7.31e-15!63;CL:0000559!7.31e-15!63;CL:0000988!2.20e-14!182;CL:0000037!2.98e-14!172;CL:0000566!2.98e-14!172;CL:0002032!2.11e-13!165;CL:0000837!2.11e-13!165;CL:0000763!1.83e-12!112;CL:0000049!1.83e-12!112;CL:0000624!2.78e-08!6;CL:0000080!3.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.61e-25;33!CL:0002057;4.61e-25;33!CL:0000473;2.39e-18;39!CL:0000234;2.39e-18;39!CL:0000097;6.99e-18;5!CL:0000775;4.77e-16;3!CL:0000623;1.03e-15;3!CL:0000766;2.89e-14;69!CL:0000576;8.88e-12;48!CL:0001014;1.62e-11;2!CL:0001016;1.62e-11;2!CL:0000163;5.67e-10;9!CL:0000738;2.49e-09;136!CL:0002087;2.17e-08;104!CL:0000081;1.32e-07;11!CL:0000763;3.95e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.44e-32,136;CL:0002031,1.02e-27,120;CL:0000766,5.57e-27,72;CL:0000557,1.93e-26,67;CL:0000988,3.94e-25,177;CL:0000037,5.61e-25,168;CL:0002032,1.79e-24,161;CL:0000837,1.79e-24,161;CL:0000839,2.10e-21,66;CL:0000860,2.89e-21,42;CL:0002057,2.89e-21,42;CL:0000763,2.46e-20,108;CL:0000049,2.46e-20,108;CL:0002087,2.82e-18,115;CL:0000473,3.13e-18,48;CL:0000234,3.13e-18,48;CL:0002009,5.93e-18,61;CL:0000097,6.45e-18,5;CL:0002028,6.45e-18,5;CL:0000775,3.51e-16,3;CL:0000623,2.11e-15,3;CL:0000825,2.11e-15,3;CL:0002194,5.46e-14,59;CL:0000576,5.46e-14,59;CL:0000040,5.46e-14,59;CL:0000559,5.46e-14,59;CL:0001014,1.50e-11,2;CL:0001016,1.50e-11,2;CL:0000163,5.43e-10,9;CL:0000134,2.87e-09,354;CL:0002320,5.87e-09,361;CL:0000219,7.28e-08,386;CL:0000081,1.34e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;6.57e-16;42!UBERON:0005754;6.05e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.28e-17!80;UBERON:0002390!1.47e-16!102;UBERON:0003061!1.47e-16!102;UBERON:0001474!4.85e-16!86;UBERON:0004765!5.23e-14!101;UBERON:0001434!5.23e-14!101;UBERON:0002193!8.96e-14!112;UBERON:0002405!5.84e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;6.05e-07;1!UBERON:0006868;6.05e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.31e-23,82;UBERON:0002371,8.04e-23,76;UBERON:0004765,9.47e-21,90;UBERON:0002390,1.29e-20,98;UBERON:0003061,1.29e-20,98;UBERON:0002193,2.83e-18,108;UBERON:0001434,3.15e-18,100;UBERON:0002405,7.06e-18,93;UBERON:0002204,4.10e-09,167;UBERON:0002384,1.56e-08,371;UBERON:0003081,1.68e-08,203;UBERON:0000998,5.90e-07,1;UBERON:0006868,5.90e-07,1 | |||
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| ||
|short_description=p13@NR4A2 | |||
}} | }} |
Latest revision as of 15:46, 17 September 2015
Short description: | p13@NR4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NR4A2_5end |
Coexpression cluster: | C1881_Mast_CD14_CD8_Neutrophils_CD4_seminal_CD19 |
Association with transcript: | 77bp_to_HQ692824, HQ709176_5end |
EntrezGene: | NR4A2 |
HGNC: | 7981 |
UniProt: | F1D8N6F1DAL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 3.31e-23 | 82 |
bone marrow | 8.04e-23 | 76 |
skeletal element | 9.47e-21 | 90 |
hematopoietic system | 1.29e-20 | 98 |
blood island | 1.29e-20 | 98 |
hemolymphoid system | 2.83e-18 | 108 |
skeletal system | 3.15e-18 | 100 |
immune system | 7.06e-18 | 93 |
musculoskeletal system | 4.10e-09 | 167 |
connective tissue | 1.56e-08 | 371 |
lateral plate mesoderm | 1.68e-08 | 203 |
seminal vesicle | 5.90e-07 | 1 |
seminal fluid secreting gland | 5.90e-07 | 1 |