FFCP PHASE1:Hg19::chr2:15473961..15473965,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:15473961..15473965,-
|short_description=p@chr2:15473961..15473965,-
|description=CAGE_peak_at_chr2:15473961..15473965,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:15473961..15473965,- | |||
|coexpression_cluster_id=C347 | |||
|description=CAGE_peak_at_chr2:15473961..15473965,- | |||
|id=chr2:15473961..15473965,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;5.51e-09;1!CL:0002372;5.51e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.88e-09,1;CL:0002372,3.88e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.78e-11;3!UBERON:0005425;5.51e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;5.51e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,6.72e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;5.51e-09;1!UBERON:0002134;5.51e-09;1!UBERON:0000941;5.51e-09;1!UBERON:0002171;5.51e-09;1!UBERON:0001785;5.51e-09;1!UBERON:0002464;5.51e-09;1!UBERON:0004904;5.51e-09;1!UBERON:0001021;5.51e-09;1!UBERON:0005208;5.51e-09;1!UBERON:0006518;5.51e-09;1!UBERON:0008949;5.51e-09;1!UBERON:0004145;5.51e-09;1!UBERON:0005946;5.51e-09;1!UBERON:0000101;5.51e-09;1!UBERON:0005965;5.51e-09;1!UBERON:0002167;5.51e-09;1!UBERON:0002078;5.51e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.05e-09,1;UBERON:0002134,3.31e-09,1;UBERON:0005208,3.31e-09,1;UBERON:0005946,3.31e-09,1;UBERON:0005965,3.31e-09,1;UBERON:0002078,3.31e-09,1;UBERON:0000941,3.58e-09,1;UBERON:0001785,3.58e-09,1;UBERON:0002464,3.58e-09,1;UBERON:0004904,3.58e-09,1;UBERON:0001021,3.58e-09,1;UBERON:0003902,3.58e-09,1;UBERON:0005425,3.58e-09,1;UBERON:0002171,4.91e-09,1;UBERON:0006518,4.91e-09,1;UBERON:0008949,4.91e-09,1;UBERON:0000101,4.91e-09,1;UBERON:0002167,4.91e-09,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0.154934401160603,0.284338464974843,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.22465726229299,0.300353785683013,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.786839080455332,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0.780356085359269,0.822189523018381,0.552700035571697,0,0.14828656316206,0.535081656179426,1.04535523804977,0.113309342697566,0,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0.80642697289893,1.06976078313403,0.289648807765598,0,0,0,0.361439152384566,0,0,0.795285947051099,0,0,0,0.087834785693126,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0,0.264818361626438,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0.506328996723799,0,0.504867548488229,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.75745460055828,0,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0.215627574859517,0.641715181398742,0.254094624222463,1.30139853857622,0,0,0,0,2.99161459204025,0,0,0,0,0.623912584592421,0,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0.620304078368662,1.07857100409308,0.320182673410333,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0.366277859273374,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.429680979473094,0.435050081742686,0,0.0890320356467374,0,0,0.510450849978337,0.2023155617111,0,0.62962469366128,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0.569134746787313,0.318852545457645,0,0,1.05836791361941,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0.540911356951966,0.66614393599564,0,0,0,0,0.557216921387392,0,0,0,0,0,0.422008249231538,0.111308705022906,0,1.26675244876796,0.19924798825107,0.276283915531148,0.503865495708552,0.102268682502155,0.369254416383208,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.520855522170466,0.262379999988587,0,0,0,0,24.1320361269025,0.291604613383254,0.347249989866585,0.885741385813839,0.120596438625408,1.52581736317083,0,0,0,0.10893846351899,0.139423744278603,0.230850775511391,0.113942055847001,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0,1.51802986179348,0,0,0,0.282706142867882,0,0.995261931078505,0,0,2.07564790076435,0.370691816839509,0.626531697032732,0,0,0,0,0.391329237864179,0.485560759068186,0.789168805698781,2.41981432097328,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.277349346026277,0,0.293977192243133,0,0.34945333648406,0.343972064943233,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.189932387867636,0,0.0801588202515337,0.213452994739353,0.19980960958213,0.144090417154106,0.114536596165916,0,0.288109595976299,0.124252535565433,1.17847017308398,0,0.209205692624666,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0.558564802544508,0.229160424011684,1.43574604915363,0.199679000498991,0,0,0.0671834724867263,1.08089965062721,0,0,0,0.13480708770837,0.0984274815147488,0,0.795229689809303,0.408610218334727,0.321506296930038,0,0,0,0,0.242998226632099,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0.76280561296425,0,0,0,0,0.574647645245373,0.170388021785422,0,0.146552233678082,0,0.387848869084652,0.26446520348538,0.513260513652988,0,0,0.314408610199332,1.24271716604159,0,0.395223263795889,0.121792598380896,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0.3755727921195,0,0.221858103073705,0.124192805882767,0.415045904808692,0,0,0.285465333544967,0.235265819698172,0,0.144921028610825,0.298509605773748,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0.899606224327209,0.155262956876259,0,0,1.04349012362347,0,0,0.406870733204662,0.363697318405119,0.107410557042488,0,0.796191777397232,0,0,0,0,0.57785949122191,0.214441591374926,0,0,0,0.489473409012935,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0.491545817507439,0,0.19998739585493,0,0.172214979660816,0,0.552317850755522,0,0,2.81367616868034,0.215649622793364,0,0.327628914576042,0.169732529954025,1.06287460050841,0.371807292777007,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0.294443155503077,0.353909170043221,0,0.115525666150338,1.1441462864015,0,0,0.0752103283492573,0.20170506870352,0.781514011233092,0,0,0,0.270150338473579,0,0.620060389503552,0.0634158101939068,0,0,0,0.175871244359621,0,1.07140367175657,0,0,0,0,0.230467975111559,0.171488009437418,0.0679697329768317,0.526182188502793,0,0.444925607568277,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0.214429632529969,3.95034029331817,0.23248285073625,0.521574816907738,0,0,0.17071847709395,0,0.430227358820278,0,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0.365753774946808,0.647428837187895,0,1.1598144313382,1.45713297917742,0,0.397901550322736,0.237840181555137,0.22589216407792,0.439762066981716,0.150962843566674,0.540219106755613,0.437119121007915,0,0,0.707029641304878,0.392616934229891,0,0,0,0,0.128915775947154,0,0.535661815816973,0.352894871715692,0,0,0.917458566809082,0,0.473314686579554,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0,0.126166424835079,0,0.380095503034311,0.101988829741982,0,0.0918948995348449,0,0,0.267964130156178,0,0.413731983447581,0.213233981900981,0.23806443146374,0.129177819672012,0.31037357147929,0,0.12729431655633,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,0,0.162806537221949,0.320182037633146,0,0.0898252021065869,0,0.488965776731466,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0.154934401160603,0.284338464974843,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.22465726229299,0.300353785683013,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.786839080455332,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0.780356085359269,0.822189523018381,0.552700035571697,0,0.14828656316206,0.535081656179426,1.04535523804977,0.113309342697566,0,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0.80642697289893,1.06976078313403,0.289648807765598,0,0,0,0.361439152384566,0,0,0.795285947051099,0,0,0,0.087834785693126,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0,0.264818361626438,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0.506328996723799,0,0.504867548488229,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.75745460055828,0,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0.215627574859517,0.641715181398742,0.254094624222463,1.30139853857622,0,0,0,0,2.99161459204025,0,0,0,0,0.623912584592421,0,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0.620304078368662,1.07857100409308,0.320182673410333,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0.366277859273374,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.429680979473094,0.435050081742686,0,0.0890320356467374,0,0,0.510450849978337,0.2023155617111,0,0.62962469366128,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0.569134746787313,0.318852545457645,0,0,1.05836791361941,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0.540911356951966,0.66614393599564,0,0,0,0,0.557216921387392,0,0,0,0,0,0.422008249231538,0.111308705022906,0,1.26675244876796,0.19924798825107,0.276283915531148,0.503865495708552,0.102268682502155,0.369254416383208,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.520855522170466,0.262379999988587,0,0,0,0,24.1320361269025,0.291604613383254,0.347249989866585,0.885741385813839,0.120596438625408,1.52581736317083,0,0,0,0.10893846351899,0.139423744278603,0.230850775511391,0.113942055847001,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0,1.51802986179348,0,0,0,0.282706142867882,0,0.995261931078505,0,0,2.07564790076435,0.370691816839509,0.626531697032732,0,0,0,0,0.391329237864179,0.485560759068186,0.789168805698781,2.41981432097328,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.277349346026277,0,0.293977192243133,0,0.34945333648406,0.343972064943233,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.189932387867636,0,0.0801588202515337,0.213452994739353,0.19980960958213,0.144090417154106,0.114536596165916,0,0.288109595976299,0.124252535565433,1.17847017308398,0,0.209205692624666,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0.558564802544508,0.229160424011684,1.43574604915363,0.199679000498991,0,0,0.0671834724867263,1.08089965062721,0,0,0,0.13480708770837,0.0984274815147488,0,0.795229689809303,0.408610218334727,0.321506296930038,0,0,0,0,0.242998226632099,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0.76280561296425,0,0,0,0,0.574647645245373,0.170388021785422,0,0.146552233678082,0,0.387848869084652,0.26446520348538,0.513260513652988,0,0,0.314408610199332,1.24271716604159,0,0.395223263795889,0.121792598380896,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0.3755727921195,0,0.221858103073705,0.124192805882767,0.415045904808692,0,0,0.285465333544967,0.235265819698172,0,0.144921028610825,0.298509605773748,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0.899606224327209,0.155262956876259,0,0,1.04349012362347,0,0,0.406870733204662,0.363697318405119,0.107410557042488,0,0.796191777397232,0,0,0,0,0.57785949122191,0.214441591374926,0,0,0,0.489473409012935,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0.491545817507439,0,0.19998739585493,0,0.172214979660816,0,0.552317850755522,0,0,2.81367616868034,0.215649622793364,0,0.327628914576042,0.169732529954025,1.06287460050841,0.371807292777007,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0.294443155503077,0.353909170043221,0,0.115525666150338,1.1441462864015,0,0,0.0752103283492573,0.20170506870352,0.781514011233092,0,0,0,0.270150338473579,0,0.620060389503552,0.0634158101939068,0,0,0,0.175871244359621,0,1.07140367175657,0,0,0,0,0.230467975111559,0.171488009437418,0.0679697329768317,0.526182188502793,0,0.444925607568277,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0.214429632529969,3.95034029331817,0.23248285073625,0.521574816907738,0,0,0.17071847709395,0,0.430227358820278,0,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0.365753774946808,0.647428837187895,0,1.1598144313382,1.45713297917742,0,0.397901550322736,0.237840181555137,0.22589216407792,0.439762066981716,0.150962843566674,0.540219106755613,0.437119121007915,0,0,0.707029641304878,0.392616934229891,0,0,0,0,0.128915775947154,0,0.535661815816973,0.352894871715692,0,0,0.917458566809082,0,0.473314686579554,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0,0.126166424835079,0,0.380095503034311,0.101988829741982,0,0.0918948995348449,0,0,0.267964130156178,0,0.413731983447581,0.213233981900981,0.23806443146374,0.129177819672012,0.31037357147929,0,0.12729431655633,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,0,0.162806537221949,0.320182037633146,0,0.0898252021065869,0,0.488965776731466,0,0,0.201273793591026,0 | ||
|short_description=p@chr2:15473961..15473965,- | |||
}} | }} |
Latest revision as of 01:31, 29 July 2015
Short description: | p@chr2:15473961..15473965, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:15473961..15473965, - |
Coexpression cluster: | C347_carcinoid_retinoblastoma_neuroblastoma_Mast_Smooth_parietal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.88e-09 | 1 |
myotube | 3.88e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
surface | 3.05e-09 | 1 |
tricuspid valve | 3.31e-09 | 1 |
right atrium valve | 3.31e-09 | 1 |
outflow tract of atrium | 3.31e-09 | 1 |
outflow part of right atrium | 3.31e-09 | 1 |
right cardiac atrium | 3.31e-09 | 1 |
cranial nerve II | 3.58e-09 | 1 |
cranial nerve | 3.58e-09 | 1 |
nerve trunk | 3.58e-09 | 1 |
nerve connecting eye with brain | 3.58e-09 | 1 |
nerve | 3.58e-09 | 1 |
retinal neural layer | 3.58e-09 | 1 |
presumptive neural retina | 3.58e-09 | 1 |
lower lobe of right lung | 4.91e-09 | 1 |
right lung lobe | 4.91e-09 | 1 |
lower lobe of lung | 4.91e-09 | 1 |
lobe of lung | 4.91e-09 | 1 |
right lung | 4.91e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 6.72e-09 | 1 |