FFCP PHASE1:Mm9::chr17:66121975..66121990,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=106572 | |EntrezGene=106572 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=176 | |MCL_coexpression_id=176 | ||
|TSSclassifier=NA | |||
|UniProt=Q3TM43 | |UniProt=Q3TM43 | ||
|association_with_transcript=0bp_to_ENSMUST00000165932_5end | |association_with_transcript=0bp_to_ENSMUST00000165932_5end | ||
|cluster_id=chr17:66121975..66121990,- | |||
|description=CAGE_peak_1_at_Rab31_5end | |description=CAGE_peak_1_at_Rab31_5end | ||
|id=chr17:66121975..66121990,- | |id=chr17:66121975..66121990,- | ||
|ontology_enrichment_celltype=CL:0000055!5.17e-16!50;CL:0002319!6.60e-14!43;CL:0000221!1.11e-13!44;CL:0000133!1.11e-13!44;CL:0000393!4.30e-11!39;CL:0000211!4.30e-11!39;CL:0002321!3.96e-10!70;CL:0000220!3.96e-10!70;CL:0000540!1.62e-08!33;CL:0000047!1.62e-08!33;CL:0000031!1.62e-08!33;CL:0000404!1.62e-08!33;CL:0000333!3.98e-07!10;CL:0000095!3.98e-07!10;CL:0000243!3.98e-07!10;CL:0000123!3.98e-07!10;CL:0000125!3.98e-07!10;CL:0000030!3.98e-07!10;CL:0000339!3.98e-07!10 | |ontology_enrichment_celltype=CL:0000055!5.17e-16!50;CL:0002319!6.60e-14!43;CL:0000221!1.11e-13!44;CL:0000133!1.11e-13!44;CL:0000393!4.30e-11!39;CL:0000211!4.30e-11!39;CL:0002321!3.96e-10!70;CL:0000220!3.96e-10!70;CL:0000540!1.62e-08!33;CL:0000047!1.62e-08!33;CL:0000031!1.62e-08!33;CL:0000404!1.62e-08!33;CL:0000333!3.98e-07!10;CL:0000095!3.98e-07!10;CL:0000243!3.98e-07!10;CL:0000123!3.98e-07!10;CL:0000125!3.98e-07!10;CL:0000030!3.98e-07!10;CL:0000339!3.98e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.59e-14,43;CL:0000221,1.11e-13,44;CL:0000133,1.11e-13,44;CL:0000393,4.29e-11,39;CL:0000211,4.29e-11,39;CL:0002321,4.41e-10,70;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33;CL:0000333,3.97e-07,10;CL:0000095,3.97e-07,10;CL:0000243,3.97e-07,10;CL:0000123,3.97e-07,10;CL:0000125,3.97e-07,10;CL:0000030,3.97e-07,10;CL:0000339,3.97e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.92e-16!75;UBERON:0001016!1.92e-16!75;UBERON:0001017!2.09e-15!73;UBERON:0005743!2.09e-15!73;UBERON:0004121!5.08e-11!102;UBERON:0000924!5.08e-11!102;UBERON:0006601!5.08e-11!102;UBERON:0002020!2.32e-08!34;UBERON:0001049!9.26e-08!52;UBERON:0005068!9.26e-08!52;UBERON:0006241!9.26e-08!52;UBERON:0007135!9.26e-08!52;UBERON:0000955!1.08e-07!50;UBERON:0006238!1.08e-07!50;UBERON:0002616!1.80e-07!49;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29 | |ontology_enrichment_uberon=UBERON:0000073!1.92e-16!75;UBERON:0001016!1.92e-16!75;UBERON:0001017!2.09e-15!73;UBERON:0005743!2.09e-15!73;UBERON:0004121!5.08e-11!102;UBERON:0000924!5.08e-11!102;UBERON:0006601!5.08e-11!102;UBERON:0002020!2.32e-08!34;UBERON:0001049!9.26e-08!52;UBERON:0005068!9.26e-08!52;UBERON:0006241!9.26e-08!52;UBERON:0007135!9.26e-08!52;UBERON:0000955!1.08e-07!50;UBERON:0006238!1.08e-07!50;UBERON:0002616!1.80e-07!49;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-16,75;UBERON:0001017,2.08e-15,73;UBERON:0004121,5.02e-11,95;UBERON:0000924,5.02e-11,95;UBERON:0006601,5.02e-11,95;UBERON:0000073,1.48e-08,54;UBERON:0002020,2.32e-08,34;UBERON:0001049,9.25e-08,52;UBERON:0005068,9.25e-08,52;UBERON:0006241,9.25e-08,52;UBERON:0007135,9.25e-08,52;UBERON:0003528,2.76e-07,29;UBERON:0002791,2.76e-07,29;UBERON:0001893,2.76e-07,29 | |||
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| ||
|short_description=p1@Rab31 | |short_description=p1@Rab31 | ||
}} | }} |
Latest revision as of 19:08, 26 September 2015
Short description: | p1@Rab31 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab31_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | 0bp_to_ENSMUST00000165932_5end |
EntrezGene: | Rab31 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.59e-14 | 43 |
ectodermal cell | 1.11e-13 | 44 |
neurectodermal cell | 1.11e-13 | 44 |
electrically responsive cell | 4.29e-11 | 39 |
electrically active cell | 4.29e-11 | 39 |
embryonic cell | 4.41e-10 | 70 |
neuron | 1.62e-08 | 33 |
neuronal stem cell | 1.62e-08 | 33 |
neuroblast | 1.62e-08 | 33 |
electrically signaling cell | 1.62e-08 | 33 |
migratory neural crest cell | 3.97e-07 | 10 |
neuron associated cell | 3.97e-07 | 10 |
glial cell (sensu Vertebrata) | 3.97e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.97e-07 | 10 |
glial cell | 3.97e-07 | 10 |
glioblast | 3.97e-07 | 10 |
glioblast (sensu Vertebrata) | 3.97e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.91e-16 | 75 |
central nervous system | 2.08e-15 | 73 |
ectoderm-derived structure | 5.02e-11 | 95 |
ectoderm | 5.02e-11 | 95 |
presumptive ectoderm | 5.02e-11 | 95 |
regional part of nervous system | 1.48e-08 | 54 |
gray matter | 2.32e-08 | 34 |
neural tube | 9.25e-08 | 52 |
neural rod | 9.25e-08 | 52 |
future spinal cord | 9.25e-08 | 52 |
neural keel | 9.25e-08 | 52 |
brain grey matter | 2.76e-07 | 29 |
regional part of telencephalon | 2.76e-07 | 29 |
telencephalon | 2.76e-07 | 29 |