FFCP PHASE1:Mm9::chr8:23763866..23763877,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18970 | |EntrezGene=18970 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=376 | |MCL_coexpression_id=376 | ||
|TSSclassifier=NA | |||
|UniProt=Q8K409 | |UniProt=Q8K409 | ||
|association_with_transcript=31bp_to_ENSMUST00000033938,NM_011130,uc009ldk.2_5end | |association_with_transcript=31bp_to_ENSMUST00000033938,NM_011130,uc009ldk.2_5end | ||
|cluster_id=chr8:23763866..23763877,- | |||
|description=CAGE_peak_2_at_Polb_5end | |description=CAGE_peak_2_at_Polb_5end | ||
|id=chr8:23763866..23763877,- | |id=chr8:23763866..23763877,- | ||
|ontology_enrichment_celltype=CL:0000117!1.47e-12!23;CL:0000337!1.47e-12!23;CL:0000540!1.18e-09!33;CL:0000047!1.18e-09!33;CL:0000031!1.18e-09!33;CL:0000404!1.18e-09!33 | |ontology_enrichment_celltype=CL:0000117!1.47e-12!23;CL:0000337!1.47e-12!23;CL:0000540!1.18e-09!33;CL:0000047!1.18e-09!33;CL:0000031!1.18e-09!33;CL:0000404!1.18e-09!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-13,23;CL:0000337,1.24e-13,23;CL:0000540,4.07e-10,33;CL:0000047,4.07e-10,33;CL:0000031,4.07e-10,33;CL:0000404,4.07e-10,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.83e-19!63;UBERON:0004121!6.85e-18!102;UBERON:0000924!6.85e-18!102;UBERON:0006601!6.85e-18!102;UBERON:0000153!9.81e-18!94;UBERON:0007811!2.31e-16!86;UBERON:0003056!1.68e-15!49;UBERON:0002020!1.97e-15!34;UBERON:0001049!3.38e-15!52;UBERON:0005068!3.38e-15!52;UBERON:0006241!3.38e-15!52;UBERON:0007135!3.38e-15!52;UBERON:0002346!2.34e-14!71;UBERON:0003075!2.34e-14!71;UBERON:0007284!2.34e-14!71;UBERON:0001017!6.31e-14!73;UBERON:0005743!6.31e-14!73;UBERON:0000955!1.09e-13!50;UBERON:0006238!1.09e-13!50;UBERON:0002616!2.57e-13!49;UBERON:0000073!1.04e-12!75;UBERON:0001016!1.04e-12!75;UBERON:0002791!1.74e-12!29;UBERON:0003528!1.74e-12!29;UBERON:0001893!1.74e-12!29;UBERON:0003080!1.76e-12!40;UBERON:0002780!2.92e-12!39;UBERON:0001890!2.92e-12!39;UBERON:0006240!2.92e-12!39;UBERON:0000956!9.04e-09!21;UBERON:0001869!9.04e-09!21;UBERON:0000203!9.04e-09!21;UBERON:0000475!9.90e-07!200 | |ontology_enrichment_uberon=UBERON:0000033!9.83e-19!63;UBERON:0004121!6.85e-18!102;UBERON:0000924!6.85e-18!102;UBERON:0006601!6.85e-18!102;UBERON:0000153!9.81e-18!94;UBERON:0007811!2.31e-16!86;UBERON:0003056!1.68e-15!49;UBERON:0002020!1.97e-15!34;UBERON:0001049!3.38e-15!52;UBERON:0005068!3.38e-15!52;UBERON:0006241!3.38e-15!52;UBERON:0007135!3.38e-15!52;UBERON:0002346!2.34e-14!71;UBERON:0003075!2.34e-14!71;UBERON:0007284!2.34e-14!71;UBERON:0001017!6.31e-14!73;UBERON:0005743!6.31e-14!73;UBERON:0000955!1.09e-13!50;UBERON:0006238!1.09e-13!50;UBERON:0002616!2.57e-13!49;UBERON:0000073!1.04e-12!75;UBERON:0001016!1.04e-12!75;UBERON:0002791!1.74e-12!29;UBERON:0003528!1.74e-12!29;UBERON:0001893!1.74e-12!29;UBERON:0003080!1.76e-12!40;UBERON:0002780!2.92e-12!39;UBERON:0001890!2.92e-12!39;UBERON:0006240!2.92e-12!39;UBERON:0000956!9.04e-09!21;UBERON:0001869!9.04e-09!21;UBERON:0000203!9.04e-09!21;UBERON:0000475!9.90e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.81e-23,73;UBERON:0004121,3.43e-22,95;UBERON:0000924,3.43e-22,95;UBERON:0006601,3.43e-22,95;UBERON:0002346,2.78e-18,64;UBERON:0003075,2.78e-18,64;UBERON:0007284,2.78e-18,64;UBERON:0000073,1.59e-17,54;UBERON:0001049,1.79e-16,52;UBERON:0005068,1.79e-16,52;UBERON:0006241,1.79e-16,52;UBERON:0007135,1.79e-16,52;UBERON:0003056,2.47e-16,49;UBERON:0002020,3.21e-16,34;UBERON:0001017,1.94e-15,73;UBERON:0001016,2.71e-14,75;UBERON:0000955,2.14e-13,47;UBERON:0006238,2.14e-13,47;UBERON:0003080,4.92e-13,40;UBERON:0003528,5.16e-13,29;UBERON:0002791,5.16e-13,29;UBERON:0001893,5.16e-13,29;UBERON:0002616,5.36e-13,46;UBERON:0002780,8.58e-13,39;UBERON:0001890,8.58e-13,39;UBERON:0006240,8.58e-13,39;UBERON:0010314,2.11e-10,92;UBERON:0000956,5.77e-09,21;UBERON:0001869,5.77e-09,21;UBERON:0000203,5.77e-09,21 | |||
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| ||
|short_description=p2@Polb | |short_description=p2@Polb | ||
}} | }} |
Latest revision as of 20:15, 1 October 2015
Short description: | p2@Polb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Polb_5end |
Coexpression cluster: | MCL_coexpression_mm9:376 |
Association with transcript: | 31bp_to_ENSMUST00000033938, NM_011130, uc009ldk.2_5end |
EntrezGene: | Polb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-13 | 23 |
neuron | 4.07e-10 | 33 |
neuronal stem cell | 4.07e-10 | 33 |
neuroblast | 4.07e-10 | 33 |
electrically signaling cell | 4.07e-10 | 33 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.81e-23 | 73 |
ectoderm-derived structure | 3.43e-22 | 95 |
ectoderm | 3.43e-22 | 95 |
presumptive ectoderm | 3.43e-22 | 95 |
neurectoderm | 2.78e-18 | 64 |
neural plate | 2.78e-18 | 64 |
presumptive neural plate | 2.78e-18 | 64 |
regional part of nervous system | 1.59e-17 | 54 |
neural tube | 1.79e-16 | 52 |
neural rod | 1.79e-16 | 52 |
future spinal cord | 1.79e-16 | 52 |
neural keel | 1.79e-16 | 52 |
pre-chordal neural plate | 2.47e-16 | 49 |
gray matter | 3.21e-16 | 34 |
central nervous system | 1.94e-15 | 73 |
nervous system | 2.71e-14 | 75 |
brain | 2.14e-13 | 47 |
future brain | 2.14e-13 | 47 |
anterior neural tube | 4.92e-13 | 40 |
brain grey matter | 5.16e-13 | 29 |
regional part of telencephalon | 5.16e-13 | 29 |
telencephalon | 5.16e-13 | 29 |
regional part of brain | 5.36e-13 | 46 |
regional part of forebrain | 8.58e-13 | 39 |
forebrain | 8.58e-13 | 39 |
future forebrain | 8.58e-13 | 39 |
structure with developmental contribution from neural crest | 2.11e-10 | 92 |
cerebral cortex | 5.77e-09 | 21 |
cerebral hemisphere | 5.77e-09 | 21 |
pallium | 5.77e-09 | 21 |