Personal tools

FFCP PHASE1:Mm9::chr6:145159661..145159742,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67636
|EntrezGene=67636
|HGNC=
|HGNC=
|MCL_coexpression_id=1752
|MCL_coexpression_id=1752
|TSSclassifier=NA
|UniProt=Q91V16
|UniProt=Q91V16
|association_with_transcript=0bp_to_ENSMUST00000039729,ENSMUST00000111719,ENSMUST00000111721,ENSMUST00000111723,ENSMUST00000111724,ENSMUST00000111726,ENSMUST00000126007,NM_133688,uc009erf.2,uc009erg.2_5end
|association_with_transcript=0bp_to_ENSMUST00000039729,ENSMUST00000111719,ENSMUST00000111721,ENSMUST00000111723,ENSMUST00000111724,ENSMUST00000111726,ENSMUST00000126007,NM_133688,uc009erf.2,uc009erg.2_5end
|cluster_id=chr6:145159661..145159742,+
|description=CAGE_peak_1_at_Lyrm5_5end
|description=CAGE_peak_1_at_Lyrm5_5end
|id=chr6:145159661..145159742,+
|id=chr6:145159661..145159742,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!1.33e-08!47;UBERON:0005256!1.08e-07!47
|ontology_enrichment_uberon=UBERON:0003914!1.33e-08!47;UBERON:0005256!1.08e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.33e-08,47;UBERON:0003104,3.55e-08,61;UBERON:0009142,3.55e-08,61;UBERON:0005256,5.39e-08,45
|phase1_expression=14.8938427807458,21.6364752736404,11.8299802241279,22.9872800593191,15.0268718983904,9.9048770428015,13.5495331545405,6.97265946584512,3.66050677594334,1.40438715793196,7.70480857014772,5.2649624936922,13.6960583944965,8.91688104673774,5.3297561890506,8.90891176515234,9.79386629379405,11.8298312009339,12.8887567589394,7.63901373236454,16.8385714499118,8.24114894967348,7.05239430675126,27.9986739888462,25.0056116363215,28.137366241636,15.9381938578858,18.5305260109865,19.0023419456374,13.1055667475164,10.8647950221099,10.1604907753541,3.69038872550742,0,13.8648777480612,16.4572298904907,13.6793468695787,34.3195937204264,34.3787551590472,47.6406607016156,61.7643062432565,38.9335926426314,42.2394007137104,13.2191658874356,13.8886395770735,12.8482726513177,12.5182615095686,14.3896603211095,13.1811709640683,19.2485600083541,11.6188729949051,8.62515386189829,6.87908684836719,5.80289713609076,3.6970317905671,17.2363822144084,15.7593391966316,14.9544906760458,3.03474691289397,4.7609188134483,6.33831403506179,6.77689064138264,5.33576877666684,6.29929802096979,4.94433181283487,6.3943210345149,5.69240209984969,8.06858441175265,5.80661828927475,4.45519596494579,7.15104868594699,4.57041575046086,8.39300455616131,5.87955836231779,4.02550978276593,7.35375029288017,6.60695285996332,17.1101033034152,21.5049146558741,5.14356522147756,4.48289453651807,4.16730696445408,16.1926139420801,18.0084035210138,17.1134037510027,6.18720029494702,11.8168495063255,5.03278503728312,15.5995958266359,14.2074533000757,15.3628179011889,48.1837371109576,25.1589393471868,57.2085383136086,66.9269709971099,86.4691892097858,43.8186590811066,23.1785238706159,23.3807404142582,21.2003744706204,16.9012103732017,24.3820307087204,0,0,9.09262372247099,8.61423542615335,10.1104889002957,58.9188819350349,12.6879562987114,36.6652083490117,14.052311468057,38.6671157456419,52.5803333743813,68.7295240919959,57.2657003750882,63.7129618041455,19.7755974187499,125.367642449563,10.6153266233985,27.662131341007,25.1759331044849,22.7891368973554,18.6391761218122,19.6163133997737,23.458031163107,19.4147361958529,6.11057134980193,5.39912457894067,6.35351135365323,28.9095934051308,26.992535566299,8.92145900001337,17.5562563394199,14.5757810678288,29.9214784165767,26.4453258800445,12.8317598451399,19.9051152976149,39.9301958325206,45.6658827273649,13.1421647392331,10.5754968039398,13.1445354757905,14.3169576943929,14.6278473175355,16.1423287558911,16.4915035225123,23.8007101079894,7.54487975264948,10.7790465695657,7.74184946321375,6.79506770525482,10.0097009721215,14.9748431604532,14.1989674121481,14.52950147775,4.91549231119264,6.17634977075316,7.95657798307659,26.0978473394732,18.2930326785255,24.308378297237,18.7028341112316,25.3825858954151,27.3052789810659,32.7872862098075,29.2418007525585,39.2331550353689,40.3171632288027,53.0260908975478,62.2608457312172,66.3747942911009,54.6679787074716,48.0458979162131,26.2862435705159,13.9950272835827,27.4247589876552,21.4204958997471,9.59797127408553,9.98617688999886,11.8558064416326,21.176770085451,24.6839628667806,27.202264534096,21.8283368310475,23.8813484349816,28.1495433856302,23.4768637008558,26.3201517610812,21.5716658077013,24.4235996358404,22.1046813312348,7.39704813717019,12.5673363870702,14.6520056375005,16.6994088833158,17.2617713579187,18.5859922709344,30.9226666537618,37.6405877347986,45.6866298018401,38.7467094714454,53.3614728756868,9.84386123724955,6.2898878436225,10.5685192820881,12.1716072833102,15.9176925436595,19.0969388836065,24.1664755458681,38.4260487456834,32.3982467561936,31.629005436018,30.8876986564858,37.7565584468618,48.4951445658455,61.5333128380159,60.7878836917843,16.9972934953276,10.8010104709176,10.2667935158476,6.11082308790677,6.80601720036656,13.7355131102289,14.9967493758189,10.1469496886055,12.4531763843891,13.5093460685753,15.6265673284337,14.2561083802692,19.858772914578,12.43981903801,7.53956419696361,15.7732648307426,22.6211565588757,27.3177378841685,37.8899392371189,33.9913891117389,13.6066004662641,43.4249994791522,7.88770548540642,11.7131623288992,8.18608911384636,9.79772071605463,8.46634961513098,11.0399847007645,8.50102473517278,9.35218745316198,11.4633455604492,24.0990987316355,21.4329528664486,5.1639025063504,10.9134262766896,16.4970122972535,25.2215762845929,11.4106898992841,10.5813244937663,26.4047111658257,9.44966057218473,25.8245524272899,21.7079766261306,16.7225515559653,20.3203505679291,29.0753817300951,42.1674434299995,27.8465966770104,36.4270378156553,12.6042765821917,4.78627129996192,12.8602221018955,18.798064766081,14.4478742257677,17.4421961838248,9.43841342255258,23.9365142224985,23.7251919367479,30.4329189315847,22.0947578941583,20.8289110437718,18.6970067277283,18.1445962884767,14.4443991775654,19.5292160542,28.5554965096185,7.00570611271196,9.08102219038179,8.33375373163703,6.96963290917357,6.15124024744613,8.92234875505438,5.60928818979723,5.45810664062266,7.32459861163446,39.1414953386197,8.69923982348122,14.6390016331331,11.2325554454673,13.381650944926,14.4119292072477,18.7461441474901,19.67152246263,21.9874991266585,17.1091764745167,36.6590194721286,27.6209539955253,19.1381178936293,11.0857188606255,16.3338998209,11.3660644660403,15.8818757961331,23.2367332518593,20.4420884205002,19.5038380631822,25.3663326867306,25.63467055695,7.2682557744481,4.25722952109345,10.2710957164827,11.6928740680016,9.13036147904155,8.14593554603186,7.09153152167816,10.0428878478713,10.9043765943999,13.183777551315,8.87270429204197,9.94070383545475,10.5833025804362,15.193997283604,33.5560967750513,15.7610026895586,11.8422290724508,16.9563462527719,27.8193015406354,20.2697073487277,17.3994043053902,15.8632600518509,31.0974704501925,18.6368108063632,16.1113832777512,15.4681788628637,17.0134650520251,18.4972280338073,21.9064230243013,24.300810008345,24.3173449741079,23.5634052671786,21.2281727818246,11.3128208866753,11.5717213286299,9.21961471072325,10.9398022680732,13.4152424081909,18.7520378619014,26.4473606083922,26.5785223838174,25.3526175577534,27.2912988704901,28.3896815877069,31.6892253528608,33.0554521368685,29.4515701062399,30.5556694843863,30.0065025508336,27.232816597041,30.6725660537291,28.4339271554282,31.7949667490298,25.0294554241353,30.3483628532467,30.9967046931517,27.7611655767747,33.2206112866117,27.3305183490115,28.9026197138981,30.2530168153519,31.9139667537775,23.567975409625,26.9301491141875,25.2171474881442,28.6461730218783,29.1281261429616,19.097754487133,6.99469618226249,25.9664085374403,24.2804291074577,35.1970531006672,37.0593584120786,58.4306945763462
|phase1_expression=14.8938427807458,21.6364752736404,11.8299802241279,22.9872800593191,15.0268718983904,9.9048770428015,13.5495331545405,6.97265946584512,3.66050677594334,1.40438715793196,7.70480857014772,5.2649624936922,13.6960583944965,8.91688104673774,5.3297561890506,8.90891176515234,9.79386629379405,11.8298312009339,12.8887567589394,7.63901373236454,16.8385714499118,8.24114894967348,7.05239430675126,27.9986739888462,25.0056116363215,28.137366241636,15.9381938578858,18.5305260109865,19.0023419456374,13.1055667475164,10.8647950221099,10.1604907753541,3.69038872550742,0,13.8648777480612,16.4572298904907,13.6793468695787,34.3195937204264,34.3787551590472,47.6406607016156,61.7643062432565,38.9335926426314,42.2394007137104,13.2191658874356,13.8886395770735,12.8482726513177,12.5182615095686,14.3896603211095,13.1811709640683,19.2485600083541,11.6188729949051,8.62515386189829,6.87908684836719,5.80289713609076,3.6970317905671,17.2363822144084,15.7593391966316,14.9544906760458,3.03474691289397,4.7609188134483,6.33831403506179,6.77689064138264,5.33576877666684,6.29929802096979,4.94433181283487,6.3943210345149,5.69240209984969,8.06858441175265,5.80661828927475,4.45519596494579,7.15104868594699,4.57041575046086,8.39300455616131,5.87955836231779,4.02550978276593,7.35375029288017,6.60695285996332,17.1101033034152,21.5049146558741,5.14356522147756,4.48289453651807,4.16730696445408,16.1926139420801,18.0084035210138,17.1134037510027,6.18720029494702,11.8168495063255,5.03278503728312,15.5995958266359,14.2074533000757,15.3628179011889,48.1837371109576,25.1589393471868,57.2085383136086,66.9269709971099,86.4691892097858,43.8186590811066,23.1785238706159,23.3807404142582,21.2003744706204,16.9012103732017,24.3820307087204,0,0,9.09262372247099,8.61423542615335,10.1104889002957,58.9188819350349,12.6879562987114,36.6652083490117,14.052311468057,38.6671157456419,52.5803333743813,68.7295240919959,57.2657003750882,63.7129618041455,19.7755974187499,125.367642449563,10.6153266233985,27.662131341007,25.1759331044849,22.7891368973554,18.6391761218122,19.6163133997737,23.458031163107,19.4147361958529,6.11057134980193,5.39912457894067,6.35351135365323,28.9095934051308,26.992535566299,8.92145900001337,17.5562563394199,14.5757810678288,29.9214784165767,26.4453258800445,12.8317598451399,19.9051152976149,39.9301958325206,45.6658827273649,13.1421647392331,10.5754968039398,13.1445354757905,14.3169576943929,14.6278473175355,16.1423287558911,16.4915035225123,23.8007101079894,7.54487975264948,10.7790465695657,7.74184946321375,6.79506770525482,10.0097009721215,14.9748431604532,14.1989674121481,14.52950147775,4.91549231119264,6.17634977075316,7.95657798307659,26.0978473394732,18.2930326785255,24.308378297237,18.7028341112316,25.3825858954151,27.3052789810659,32.7872862098075,29.2418007525585,39.2331550353689,40.3171632288027,53.0260908975478,62.2608457312172,66.3747942911009,54.6679787074716,48.0458979162131,26.2862435705159,13.9950272835827,27.4247589876552,21.4204958997471,9.59797127408553,9.98617688999886,11.8558064416326,21.176770085451,24.6839628667806,27.202264534096,21.8283368310475,23.8813484349816,28.1495433856302,23.4768637008558,26.3201517610812,21.5716658077013,24.4235996358404,22.1046813312348,7.39704813717019,12.5673363870702,14.6520056375005,16.6994088833158,17.2617713579187,18.5859922709344,30.9226666537618,37.6405877347986,45.6866298018401,38.7467094714454,53.3614728756868,9.84386123724955,6.2898878436225,10.5685192820881,12.1716072833102,15.9176925436595,19.0969388836065,24.1664755458681,38.4260487456834,32.3982467561936,31.629005436018,30.8876986564858,37.7565584468618,48.4951445658455,61.5333128380159,60.7878836917843,16.9972934953276,10.8010104709176,10.2667935158476,6.11082308790677,6.80601720036656,13.7355131102289,14.9967493758189,10.1469496886055,12.4531763843891,13.5093460685753,15.6265673284337,14.2561083802692,19.858772914578,12.43981903801,7.53956419696361,15.7732648307426,22.6211565588757,27.3177378841685,37.8899392371189,33.9913891117389,13.6066004662641,43.4249994791522,7.88770548540642,11.7131623288992,8.18608911384636,9.79772071605463,8.46634961513098,11.0399847007645,8.50102473517278,9.35218745316198,11.4633455604492,24.0990987316355,21.4329528664486,5.1639025063504,10.9134262766896,16.4970122972535,25.2215762845929,11.4106898992841,10.5813244937663,26.4047111658257,9.44966057218473,25.8245524272899,21.7079766261306,16.7225515559653,20.3203505679291,29.0753817300951,42.1674434299995,27.8465966770104,36.4270378156553,12.6042765821917,4.78627129996192,12.8602221018955,18.798064766081,14.4478742257677,17.4421961838248,9.43841342255258,23.9365142224985,23.7251919367479,30.4329189315847,22.0947578941583,20.8289110437718,18.6970067277283,18.1445962884767,14.4443991775654,19.5292160542,28.5554965096185,7.00570611271196,9.08102219038179,8.33375373163703,6.96963290917357,6.15124024744613,8.92234875505438,5.60928818979723,5.45810664062266,7.32459861163446,39.1414953386197,8.69923982348122,14.6390016331331,11.2325554454673,13.381650944926,14.4119292072477,18.7461441474901,19.67152246263,21.9874991266585,17.1091764745167,36.6590194721286,27.6209539955253,19.1381178936293,11.0857188606255,16.3338998209,11.3660644660403,15.8818757961331,23.2367332518593,20.4420884205002,19.5038380631822,25.3663326867306,25.63467055695,7.2682557744481,4.25722952109345,10.2710957164827,11.6928740680016,9.13036147904155,8.14593554603186,7.09153152167816,10.0428878478713,10.9043765943999,13.183777551315,8.87270429204197,9.94070383545475,10.5833025804362,15.193997283604,33.5560967750513,15.7610026895586,11.8422290724508,16.9563462527719,27.8193015406354,20.2697073487277,17.3994043053902,15.8632600518509,31.0974704501925,18.6368108063632,16.1113832777512,15.4681788628637,17.0134650520251,18.4972280338073,21.9064230243013,24.300810008345,24.3173449741079,23.5634052671786,21.2281727818246,11.3128208866753,11.5717213286299,9.21961471072325,10.9398022680732,13.4152424081909,18.7520378619014,26.4473606083922,26.5785223838174,25.3526175577534,27.2912988704901,28.3896815877069,31.6892253528608,33.0554521368685,29.4515701062399,30.5556694843863,30.0065025508336,27.232816597041,30.6725660537291,28.4339271554282,31.7949667490298,25.0294554241353,30.3483628532467,30.9967046931517,27.7611655767747,33.2206112866117,27.3305183490115,28.9026197138981,30.2530168153519,31.9139667537775,23.567975409625,26.9301491141875,25.2171474881442,28.6461730218783,29.1281261429616,19.097754487133,6.99469618226249,25.9664085374403,24.2804291074577,35.1970531006672,37.0593584120786,58.4306945763462
|short_description=p1@Lyrm5
|short_description=p1@Lyrm5
}}
}}

Latest revision as of 22:04, 26 September 2015

Short description:p1@Lyrm5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lyrm5_5end
Coexpression cluster:MCL_coexpression_mm9:1752
Association with transcript: 0bp_to_ENSMUST00000039729, ENSMUST00000111719, ENSMUST00000111721, ENSMUST00000111723, ENSMUST00000111724, ENSMUST00000111726, ENSMUST00000126007, NM_133688, uc009erf.2, uc009erg.2_5end
EntrezGene:Lyrm5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lyrm5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.99
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.55
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.26
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.91
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.89
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D128.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.01
GP2+ M cell, pool1.CNhs13228.11845-124H928.14
GP2+ M cell, pool2.CNhs13231.11846-124I115.94
GP2+ M cell, pool3.CNhs13240.11847-124I218.53
Ileum epithelium, pool1.CNhs13199.10252-104B919.00
Ileum epithelium, pool2.CNhs13232.10253-104C113.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G834.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H134.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H347.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G961.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H238.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H442.24
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.89
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.18
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.95
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D915.60
Mouse Schwann, donor2.CNhs12573.11746-123F914.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F748.18
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C857.21
Mouse hepatocyte, donor6.CNhs13090.11822-124F466.93
Mouse hepatocyte, donor8.CNhs13091.11824-124F686.47
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I723.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.20
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B658.92
accessory axillary lymph node, adult.CNhs10475.1063-29H912.69
adrenal gland, adult.CNhs10508.49-24D736.67
adrenal gland, embryo E14.CNhs11038.406-44C514.05
adrenal gland, embryo E16.CNhs11004.1254-43D638.67
adrenal gland, embryo E17.CNhs11043.1263-45I152.58
adrenal gland, embryo E18.CNhs11026.1262-18F568.73
adrenal gland, neonate N00.CNhs11191.1311-23C157.27
adrenal gland, neonate N25.CNhs11223.1377-27I363.71
amnion, adult pregnant day17.5.CNhs10488.583-22A819.78
aorta, adult.CNhs10498.46-23H1125.37
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F527.66
bone (os femoris), neonate N16.CNhs11225.1525-43A625.18
bone (os femoris), neonate N20.CNhs11195.1350-25C322.79
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I223.46
colon, adult.CNhs10468.36-18H719.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.11
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.35
corpora quadrigemina, adult.CNhs10501.16-22A428.91
corpus striatum, adult.CNhs10487.19-21D826.99
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D517.56
cortex, neonate N30.CNhs11107.1392-42F214.58
diencephalon, adult.CNhs10482.20-12F229.92
diencephalon, neonate N30.CNhs11201.1388-42B226.45
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.91
epididymis, adult.CNhs10490.58-23B239.93
eyeball, adult.CNhs10484.31-12G445.67
eyeball, embryo E12.CNhs11016.345-16C613.14
eyeball, embryo E14.CNhs10521.399-16E210.58
eyeball, embryo E15.CNhs10593.426-16C913.14
eyeball, embryo E17.CNhs11023.1261-18D414.32
eyeball, neonate N00.CNhs11207.633-15C614.63
eyeball, neonate N01.CNhs11140.1532-43E716.14
eyeball, neonate N02.CNhs11205.1551-44G816.49
eyeball, neonate N16.CNhs11188.777-19A223.80
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H210.78
forelimb, embryo E13.CNhs10589.384-1E27.74
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E710.01
forelimb, embryo E17.CNhs10598.1517-43C414.97
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I614.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.96
heart, embryo E11.CNhs10586.331-24E926.10
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I924.31
heart, embryo E14.CNhs10597.403-26D418.70
heart, embryo E15.CNhs11017.431-16C825.38
heart, embryo E16.CNhs11021.457-17C627.31
heart, embryo E17.CNhs11025.479-18E532.79
heart, embryo E18.CNhs11030.1283-20G329.24
heart, neonate N00.CNhs11213.639-21E339.23
heart, neonate N03.CNhs11221.1349-25I240.32
heart, neonate N10.CNhs11118.749-24G153.03
heart, neonate N16.CNhs11209.782-15G162.26
heart, neonate N20.CNhs11127.821-26I666.37
heart, neonate N25.CNhs11196.1351-25D354.67
heart, neonate N30.CNhs11202.1390-42D248.05
hippocampus, adult.CNhs10478.13-16E826.29
hippocampus, neonate N00.CNhs11228.627-43G114.00
intestinal mucosa, adult.CNhs10506.860-29I327.42
intestine, adult.CNhs10496.178-9A321.42
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D59.99
intestine, embryo E15.CNhs10602.976-16D811.86
intestine, embryo E16.CNhs10585.463-22H421.18
intestine, embryo E17.CNhs10582.482-18D324.68
intestine, embryo E18.CNhs10526.1289-20F727.20
intestine, neonate N00.CNhs11126.644-26D121.83
intestine, neonate N01.CNhs11192.1322-23E923.88
intestine, neonate N06.CNhs11102.688-20B828.15
intestine, neonate N07.CNhs11095.720-20F223.48
intestine, neonate N10.CNhs11098.755-23A526.32
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E324.42
intestine, neonate N30.CNhs11131.1384-42G122.10
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F812.57
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I216.70
kidney, embryo E18.CNhs11001.1288-20C717.26
kidney, neonate N00.CNhs11214.646-21G718.59
kidney, neonate N10.CNhs11206.758-6D530.92
kidney, neonate N20.CNhs11113.832-19I137.64
kidney, neonate N25.CNhs11122.1353-25F345.69
kidney, neonate N30.CNhs11203.1385-42H138.75
liver, adult pregnant day01.CNhs10466.508-5B253.36
liver, embryo E12.CNhs10601.355-15F89.84
liver, embryo E13.CNhs10524.378-3H66.29
liver, embryo E14.CNhs10594.409-16E110.57
liver, embryo E15.CNhs10520.433-16D712.17
liver, embryo E16.CNhs10523.462-17F515.92
liver, embryo E17.CNhs10510.481-18A319.10
liver, embryo E18.CNhs10579.499-43G424.17
liver, neonate N00.CNhs11117.641-24F438.43
liver, neonate N03.CNhs11123.1345-25G232.40
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H230.89
liver, neonate N10.CNhs11115.751-24B937.76
liver, neonate N20.CNhs11220.823-25A348.50
liver, neonate N25.CNhs11198.1368-26H161.53
liver, neonate N30.CNhs11106.1382-42D160.79
lung, adult.CNhs10474.28-22B117.00
lung, embryo E12.CNhs10522.354-16G210.80
lung, embryo E14.CNhs10604.404-26F810.27
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A613.74
lung, embryo E18.CNhs10583.1287-20I615.00
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E512.45
lung, neonate N07.CNhs11111.715-19A313.51
lung, neonate N10.CNhs11219.750-23E615.63
lung, neonate N20.CNhs11109.822-18A414.26
lung, neonate N25.CNhs11119.1359-25C719.86
lung, neonate N30.CNhs11133.1394-42H212.44
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.77
mammary gland, adult lactating day02.CNhs10480.595-22B622.62
mammary gland, adult pregnant day19.CNhs10476.588-5H227.32
medulla oblongata, adult.CNhs10477.17-12C237.89
medulla oblongata, neonate N30.CNhs11200.1396-42A333.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C243.42
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I924.10
ovary, adult.CNhs10507.91-2I721.43
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I410.91
oviduct, adult pregnant day01.CNhs10500.988-6G616.50
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F210.58
pancreas, embryo E16.CNhs11003.460-26E526.40
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I725.82
pancreas, neonate N00.CNhs11105.645-26G921.71
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D820.32
pancreas, neonate N16.CNhs11136.787-43B629.08
pancreas, neonate N25.CNhs11094.1555-45E242.17
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G836.43
pituitary gland, embryo E12.CNhs11018.346-16E612.60
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A512.86
pituitary gland, embryo E15.CNhs10592.427-16B918.80
pituitary gland, embryo E16.CNhs11036.449-43F614.45
pituitary gland, embryo E17.CNhs11039.1265-44F517.44
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I723.94
placenta, adult pregnant day17.CNhs10464.577-18G323.73
prostate, adult.CNhs10470.859-1F830.43
skin, adult.CNhs10492.30-1C322.09
skin, neonate N00.CNhs11124.650-25G420.83
skin, neonate N03.CNhs11215.662-22H318.70
skin, neonate N06.CNhs11097.693-20I518.14
skin, neonate N10.CNhs11108.762-6C414.44
small intestine, neonate N16.CNhs11114.790-21I119.53
spinal cord, adult.CNhs10505.24-13C928.56
spleen, adult.CNhs10465.25-2G27.01
spleen, embryo E16.CNhs11035.461-43C19.08
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D16.97
spleen, neonate N20.CNhs11112.824-19H16.15
spleen, neonate N25.CNhs11099.1354-25G38.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.32
stomach, adult.CNhs10503.33-1H639.14
stomach, embryo E12.CNhs10588.356-43E38.70
stomach, embryo E15.CNhs10603.1252-16G814.64
stomach, embryo E16.CNhs11022.459-17D411.23
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B818.75
stomach, neonate N07.CNhs11210.718-18A919.67
stomach, neonate N25.CNhs11104.1355-25E421.99
stomach, neonate N30.CNhs11134.1386-42I117.11
submandibular gland, adult.CNhs10469.59-29C136.66
testis, adult.CNhs10504.57-7G527.62
testis, embryo E13.CNhs11031.389-23F519.14
testis, embryo E15.CNhs11034.443-27C511.09
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I511.37
testis, embryo E18.CNhs11027.503-18G515.88
testis, neonate N00.CNhs11189.1300-22B723.24
testis, neonate N07.CNhs11222.726-26I420.44
testis, neonate N10.CNhs11204.763-44D919.50
testis, neonate N20.CNhs11110.839-18H325.37
testis, neonate N30.CNhs11130.1391-42E225.63
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I210.27
thymus, embryo E16.CNhs11002.456-26C511.69
thymus, embryo E17.CNhs10581.478-18C19.13
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F87.09
thymus, neonate N03.CNhs11137.2104-43C710.04
thymus, neonate N06.CNhs11197.681-26C410.90
thymus, neonate N07.CNhs11211.713-19D313.18
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A29.94
thymus, neonate N25.CNhs11125.1362-25G710.58
thymus, neonate N30.CNhs11132.1393-42G215.19
tongue, adult.CNhs10499.32-1B433.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.96
urinary bladder, adult.CNhs10481.879-12E427.82
uterus, adult pregnant day19.CNhs10497.590-15F520.27
uterus, adult.CNhs10509.92-27E517.40
vagina, adult.CNhs10502.89-27D515.86
vesicular gland, adult.CNhs10491.51-27F831.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.56
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I811.31
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D210.94
whole body, embryo E14.CNhs10519.395-14B113.42
whole body, embryo E16.CNhs10514.453-14F218.75
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.58
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G531.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G533.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G529.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G528.43
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.79
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G530.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G525.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.13
whole body, embryo E17.5.CNhs10513.490-9F919.10
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B325.97
whole body, neonate N00.CNhs10525.657-19C224.28
whole body, neonate N01.CNhs10576.659-23C635.20
whole body, neonate N06.CNhs10515.692-21D137.06
whole body, neonate N10.CNhs10518.761-6B458.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube1.33e-0847
mesenchyme3.55e-0861
entire embryonic mesenchyme3.55e-0861
trunk mesenchyme5.39e-0845
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:145159661..145159742,%2B&oldid=4276790"