FFCP PHASE1:Mm9::chr18:60760090..60760115,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104027 | |EntrezGene=104027 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=558 | |MCL_coexpression_id=558 | ||
|TSSclassifier=NA | |||
|UniProt=Q497V1 | |UniProt=Q497V1 | ||
|association_with_transcript=35bp_to_ENSMUST00000128528,uc008fao.2_5end | |association_with_transcript=35bp_to_ENSMUST00000128528,uc008fao.2_5end | ||
|cluster_id=chr18:60760090..60760115,- | |||
|description=CAGE_peak_9_at_Synpo_5end | |description=CAGE_peak_9_at_Synpo_5end | ||
|id=chr18:60760090..60760115,- | |id=chr18:60760090..60760115,- | ||
|ontology_enrichment_celltype=CL:0000107!2.18e-07!9;CL:0002319!3.19e-07!43;CL:0000221!9.86e-07!44;CL:0000133!9.86e-07!44 | |ontology_enrichment_celltype=CL:0000107!2.18e-07!9;CL:0002319!3.19e-07!43;CL:0000221!9.86e-07!44;CL:0000133!9.86e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.15e-15,9;CL:0002453,2.47e-11,8;CL:0002319,2.11e-10,43;CL:0000221,4.80e-10,44;CL:0000133,4.80e-10,44;CL:0000333,9.29e-09,10;CL:0000095,9.29e-09,10;CL:0000243,9.29e-09,10;CL:0000123,9.29e-09,10;CL:0000125,9.29e-09,10;CL:0000030,9.29e-09,10;CL:0000339,9.29e-09,10;CL:0000128,5.60e-08,6;CL:0000126,5.60e-08,6;CL:0000127,5.60e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.53e-08!102;UBERON:0000924!8.53e-08!102;UBERON:0006601!8.53e-08!102;UBERON:0002410!2.18e-07!9 | |ontology_enrichment_uberon=UBERON:0004121!8.53e-08!102;UBERON:0000924!8.53e-08!102;UBERON:0006601!8.53e-08!102;UBERON:0002410!2.18e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.15e-15,9;UBERON:0000010,3.48e-12,11;UBERON:0001017,3.83e-08,73;UBERON:0001016,9.36e-08,75 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70642765846759,7.0299578475031,3.69416808241138,4.4795654920116,11.5002051491977,0,0,0,0.771778308107841,1.14613375975503,1.54701627683233,0,0,0,0.677689064138264,0,0,0,0,7.78960287347852,25.7426264565442,0.207379224616955,0.540023753326763,0.420649922702764,0.856952953211411,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.510749352340751,0.46081959976873,0.131886287730194,0.182975287204819,1.04182674111352,0.279182999001381,2.25105044012672,1.06958773443767,0.589257170947335,0.569486723196412,0.559198337475902,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.445326417194474,0.520455980298408,2.13125834818499,0.691846491768175,0.452167921657868,0.705532242814229,0.502666365318702,0,0.722996784599558,0.884610551949874,1.13236794963186,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,0.748953197024114,0,1.38219787324151,0.695297280769106,1.02286182932132,1.0389402227978,0.486723789203273,1.01839363850316,0.248813941220186,0,0.420883711772948,0.910843100738926,0,0.180062129805349,1.05493372485001,0.748401490664606,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,1.0447564995665,1.4404749548556,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0,0.804820204198858,0.467061369468678,0.822799249567402,1.64167464079095,1.37816976227955,0.877199924551994,1.3173006917463,0.536825675041487,1.05144974282064,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0.398282546508734,0.569003702859245,0.571242563048644,2.25415471346161,0.814605311381257,0.775809948670503,1.47285221769669,1.01178459398812,1.03327103585722,1.255989822731,1.1105744752962,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0,0.325929952884052,0.169745085775188,0.469380496577004,0.502518772325447,0.238043640886014,1.17080188714679,0.472905432318573,0.221464689648775,0.637819074629948,1.14704320301017,1.38147985492716,1.15719246865209,0,0,0.491764273019036,0.827810238914197,0.642202359951168,0.468846746368813,0,0.757412781613119,1.57754109708128,1.56175497718655,4.09304455692318,4.06246956519338,6.68396022247182,7.35998980050964,2.42886421004937,2.63030272120181,3.95287777946523,0.321321316421807,0.709700426041343,1.95872164033981,0.81443479676788,0.824850614862677,0,0,0.302323556964751,0.565815239267694,0,0,0.775284879504663,2.54473610634254,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0.36012218806262,1.03486947026204,0.428674070063185,0,0,0,1.2178597964584,0,0,0,0.32977250588296,0.322928853391811,0.482503399425247,0.238744688006273,0.328281799490123,0.291480836629851,0.927126510052548,0.512612642393558,0.619160603889667,0.370389054739423,0,0.546776910884101,0,0,0,0,1.90934123603023,0.158167996790568,0.609958401380546,0.756037385752609,0,0.87345025498471,0.269728692769641,0.495920734352016,0.26175594198403,0.388844919875379,0,4.50954350947352,0.747582730219894,1.48912641411388,2.52786544847262,1.42075805825504,1.35164900392623,0.469428954583016,0.13020438484395,0.524296722128554,0,0.864090018773596,0,0.608175645870493,0,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0.680191150845634,0,0,0,0.19318959403219,1.50145980360946,2.19781949120718,0.428736758158132,0.501572104035363,0,1.38097570952153,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0,0,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0.758091635291392,0.25347929989024,0.565879024158229,0.280924522409647,0.384150914429216,0.574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0,0.476872379894642,0.290692833264657,0,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,0,0.593175090620871,0.394017929502254,0.409231043169689,0.309873682371932,0.964533054905707,0.249810577937946,0.701794825336225,0.859484216193193,1.14772999241306,0.661774257358546,0.231867835620421 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| ||
|short_description=p9@Synpo | |short_description=p9@Synpo | ||
}} | }} |
Latest revision as of 13:13, 1 October 2015
Short description: | p9@Synpo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Synpo_5end |
Coexpression cluster: | MCL_coexpression_mm9:558 |
Association with transcript: | 35bp_to_ENSMUST00000128528, uc008fao.2_5end |
EntrezGene: | Synpo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.15e-15 | 9 |
oligodendrocyte precursor cell | 2.47e-11 | 8 |
neural cell | 2.11e-10 | 43 |
ectodermal cell | 4.80e-10 | 44 |
neurectodermal cell | 4.80e-10 | 44 |
migratory neural crest cell | 9.29e-09 | 10 |
neuron associated cell | 9.29e-09 | 10 |
glial cell (sensu Vertebrata) | 9.29e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 9.29e-09 | 10 |
glial cell | 9.29e-09 | 10 |
glioblast | 9.29e-09 | 10 |
glioblast (sensu Vertebrata) | 9.29e-09 | 10 |
oligodendrocyte | 5.60e-08 | 6 |
macroglial cell | 5.60e-08 | 6 |
astrocyte | 5.60e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.15e-15 | 9 |
peripheral nervous system | 3.48e-12 | 11 |
central nervous system | 3.83e-08 | 73 |
nervous system | 9.36e-08 | 75 |