FFCP PHASE1:Mm9::chr17:25932584..25932609,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=558 | |MCL_coexpression_id=558 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:25932584..25932609,- | |||
|description=CAGE_peak_at_chr17:25932584..25932609,- | |description=CAGE_peak_at_chr17:25932584..25932609,- | ||
|id=chr17:25932584..25932609,- | |id=chr17:25932584..25932609,- | ||
|ontology_enrichment_celltype=CL:0000221!2.76e-17!44;CL:0000133!2.76e-17!44;CL:0002319!1.80e-16!43;CL:0000055!2.62e-12!50;CL:0000540!6.24e-11!33;CL:0000047!6.24e-11!33;CL:0000031!6.24e-11!33;CL:0000404!6.24e-11!33;CL:0000107!2.11e-09!9;CL:0000393!7.06e-08!39;CL:0000211!7.06e-08!39;CL:0000333!7.12e-07!10;CL:0000095!7.12e-07!10;CL:0000243!7.12e-07!10;CL:0000123!7.12e-07!10;CL:0000125!7.12e-07!10;CL:0000030!7.12e-07!10;CL:0000339!7.12e-07!10 | |ontology_enrichment_celltype=CL:0000221!2.76e-17!44;CL:0000133!2.76e-17!44;CL:0002319!1.80e-16!43;CL:0000055!2.62e-12!50;CL:0000540!6.24e-11!33;CL:0000047!6.24e-11!33;CL:0000031!6.24e-11!33;CL:0000404!6.24e-11!33;CL:0000107!2.11e-09!9;CL:0000393!7.06e-08!39;CL:0000211!7.06e-08!39;CL:0000333!7.12e-07!10;CL:0000095!7.12e-07!10;CL:0000243!7.12e-07!10;CL:0000123!7.12e-07!10;CL:0000125!7.12e-07!10;CL:0000030!7.12e-07!10;CL:0000339!7.12e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.99e-28,44;CL:0000133,2.99e-28,44;CL:0002319,1.17e-26,43;CL:0000540,6.77e-19,33;CL:0000047,6.77e-19,33;CL:0000031,6.77e-19,33;CL:0000404,6.77e-19,33;CL:0000107,7.73e-18,9;CL:0000393,3.69e-15,39;CL:0000211,3.69e-15,39;CL:0002321,5.63e-15,70;CL:0000333,1.44e-08,10;CL:0000095,1.44e-08,10;CL:0000243,1.44e-08,10;CL:0000123,1.44e-08,10;CL:0000125,1.44e-08,10;CL:0000030,1.44e-08,10;CL:0000339,1.44e-08,10;CL:0002453,2.60e-08,8;CL:0002614,6.35e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.76e-34!75;UBERON:0001016!3.76e-34!75;UBERON:0001017!1.23e-32!73;UBERON:0005743!1.23e-32!73;UBERON:0004121!1.48e-32!102;UBERON:0000924!1.48e-32!102;UBERON:0006601!1.48e-32!102;UBERON:0002346!4.12e-23!71;UBERON:0003075!4.12e-23!71;UBERON:0007284!4.12e-23!71;UBERON:0000033!2.00e-20!63;UBERON:0001049!5.42e-18!52;UBERON:0005068!5.42e-18!52;UBERON:0006241!5.42e-18!52;UBERON:0007135!5.42e-18!52;UBERON:0000955!5.22e-17!50;UBERON:0006238!5.22e-17!50;UBERON:0002616!3.07e-16!49;UBERON:0003056!3.08e-14!49;UBERON:0002020!3.68e-12!34;UBERON:0003080!2.92e-11!40;UBERON:0007811!9.34e-11!86;UBERON:0002780!1.33e-10!39;UBERON:0001890!1.33e-10!39;UBERON:0006240!1.33e-10!39;UBERON:0000010!1.43e-10!11;UBERON:0002410!2.11e-09!9;UBERON:0002791!3.14e-09!29;UBERON:0003528!3.14e-09!29;UBERON:0001893!3.14e-09!29;UBERON:0000153!1.72e-08!94;UBERON:0002619!2.78e-08!17;UBERON:0003076!4.33e-08!12;UBERON:0003057!4.33e-08!12;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10;UBERON:0000956!6.87e-07!21;UBERON:0001869!6.87e-07!21;UBERON:0000203!6.87e-07!21 | |ontology_enrichment_uberon=UBERON:0000073!3.76e-34!75;UBERON:0001016!3.76e-34!75;UBERON:0001017!1.23e-32!73;UBERON:0005743!1.23e-32!73;UBERON:0004121!1.48e-32!102;UBERON:0000924!1.48e-32!102;UBERON:0006601!1.48e-32!102;UBERON:0002346!4.12e-23!71;UBERON:0003075!4.12e-23!71;UBERON:0007284!4.12e-23!71;UBERON:0000033!2.00e-20!63;UBERON:0001049!5.42e-18!52;UBERON:0005068!5.42e-18!52;UBERON:0006241!5.42e-18!52;UBERON:0007135!5.42e-18!52;UBERON:0000955!5.22e-17!50;UBERON:0006238!5.22e-17!50;UBERON:0002616!3.07e-16!49;UBERON:0003056!3.08e-14!49;UBERON:0002020!3.68e-12!34;UBERON:0003080!2.92e-11!40;UBERON:0007811!9.34e-11!86;UBERON:0002780!1.33e-10!39;UBERON:0001890!1.33e-10!39;UBERON:0006240!1.33e-10!39;UBERON:0000010!1.43e-10!11;UBERON:0002410!2.11e-09!9;UBERON:0002791!3.14e-09!29;UBERON:0003528!3.14e-09!29;UBERON:0001893!3.14e-09!29;UBERON:0000153!1.72e-08!94;UBERON:0002619!2.78e-08!17;UBERON:0003076!4.33e-08!12;UBERON:0003057!4.33e-08!12;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10;UBERON:0000956!6.87e-07!21;UBERON:0001869!6.87e-07!21;UBERON:0000203!6.87e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.07e-47,75;UBERON:0001017,4.02e-46,73;UBERON:0004121,1.43e-38,95;UBERON:0000924,1.43e-38,95;UBERON:0006601,1.43e-38,95;UBERON:0000073,1.26e-24,54;UBERON:0002346,4.98e-23,64;UBERON:0003075,4.98e-23,64;UBERON:0007284,4.98e-23,64;UBERON:0010371,3.12e-22,73;UBERON:0001049,4.72e-22,52;UBERON:0005068,4.72e-22,52;UBERON:0006241,4.72e-22,52;UBERON:0007135,4.72e-22,52;UBERON:0000955,5.34e-18,47;UBERON:0006238,5.34e-18,47;UBERON:0002410,7.73e-18,9;UBERON:0000010,2.97e-17,11;UBERON:0002616,1.01e-16,46;UBERON:0010314,7.48e-16,92;UBERON:0002020,9.97e-16,34;UBERON:0003076,2.55e-13,12;UBERON:0003057,2.55e-13,12;UBERON:0011216,1.17e-12,194;UBERON:0003528,6.95e-12,29;UBERON:0002791,6.95e-12,29;UBERON:0001893,6.95e-12,29;UBERON:0003080,1.75e-11,40;UBERON:0002780,1.96e-10,39;UBERON:0001890,1.96e-10,39;UBERON:0006240,1.96e-10,39;UBERON:0002619,8.44e-10,17;UBERON:0003056,1.47e-09,49;UBERON:0002021,2.15e-09,10;UBERON:0000411,2.15e-09,10;UBERON:0001950,2.15e-09,10;UBERON:0000956,4.48e-09,21;UBERON:0001869,4.48e-09,21;UBERON:0000203,4.48e-09,21;UBERON:0002950,1.74e-08,4;UBERON:0001891,1.74e-08,4;UBERON:0009616,1.74e-08,4;UBERON:0010286,1.74e-08,4;UBERON:0004733,9.28e-08,6;UBERON:0004732,9.28e-08,6;UBERON:0002028,9.28e-08,6;UBERON:0007277,9.28e-08,6;UBERON:0000011,1.85e-07,3;UBERON:0002240,4.38e-07,6;UBERON:0005174,4.38e-07,6;UBERON:0001137,4.38e-07,6;UBERON:0002038,6.35e-07,3;UBERON:0009663,6.35e-07,3;UBERON:0009661,6.35e-07,3;UBERON:0000125,6.35e-07,3;UBERON:0002308,6.35e-07,3;UBERON:0010313,8.29e-07,3;UBERON:0002342,8.29e-07,3;UBERON:0002005,8.29e-07,3;UBERON:0005428,8.29e-07,3;UBERON:0005062,8.29e-07,3;UBERON:0000013,9.47e-07,3 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,3.07560655828261,3.11087838518853,0.979904951377538,4.31257693094915,0,0,0,0,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,6.2916023208865,16.5213871288268,0,0,0,1.99955689082663,1.76694832761291,0,0.191690942036473,0,3.30347642998166,3.57524546638526,3.37934373163736,0,0.274462930807229,0,6.42120897703176,5.6276261003168,3.97275444219706,1.76777151284201,3.27454865837937,0.745597783301202,0.908714319998209,2.64500460373749,0,0,0,0,0,0,0.140444420131752,0,0,0,4.92951969218382,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.150722640552623,0,0,0,0,0,0.323533699894818,0,0,0,7.02673912827713,5.23616767033638,0,0,0,0,3.44518470631092,3.20250421973039,0.502617408451458,2.78118912307642,2.30143911597297,4.57133698031032,1.94689515681309,0.101839363850316,0,0,0.210441855886474,0.910843100738926,0,0.360124259610698,0.60281927134286,0.476255494059295,0.384341160854549,0.749613796477831,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0.38660238396628,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.81308047821288,0,0.252470927204373,3.78609863299508,5.0757036758563,6.03185513651837,6.4521575447189,8.24355094104858,7.64306633129848,2.83367491172426,6.72188473196017,5.53402889125133,4.17717711348349,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.643011105094777,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.14579102687879,1.20297227640581,4.11049511862385,0.755393897389701,2.02506750069542,0.900642406448441,4.07828168085784,1.03552062350364,0.62272408550506,0,0,0.486213434136588,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,0,0 | |phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,3.07560655828261,3.11087838518853,0.979904951377538,4.31257693094915,0,0,0,0,0,0,0,0,0.633831403506179,0.338844532069132,0,0,0,0,6.2916023208865,16.5213871288268,0,0,0,1.99955689082663,1.76694832761291,0,0.191690942036473,0,3.30347642998166,3.57524546638526,3.37934373163736,0,0.274462930807229,0,6.42120897703176,5.6276261003168,3.97275444219706,1.76777151284201,3.27454865837937,0.745597783301202,0.908714319998209,2.64500460373749,0,0,0,0,0,0,0.140444420131752,0,0,0,4.92951969218382,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.150722640552623,0,0,0,0,0,0.323533699894818,0,0,0,7.02673912827713,5.23616767033638,0,0,0,0,3.44518470631092,3.20250421973039,0.502617408451458,2.78118912307642,2.30143911597297,4.57133698031032,1.94689515681309,0.101839363850316,0,0,0.210441855886474,0.910843100738926,0,0.360124259610698,0.60281927134286,0.476255494059295,0.384341160854549,0.749613796477831,1.03481348295606,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0.38660238396628,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.81308047821288,0,0.252470927204373,3.78609863299508,5.0757036758563,6.03185513651837,6.4521575447189,8.24355094104858,7.64306633129848,2.83367491172426,6.72188473196017,5.53402889125133,4.17717711348349,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.643011105094777,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0.161464426695906,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,1.14579102687879,1.20297227640581,4.11049511862385,0.755393897389701,2.02506750069542,0.900642406448441,4.07828168085784,1.03552062350364,0.62272408550506,0,0,0.486213434136588,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,0,0 | ||
|short_description=p@chr17:25932584..25932609,- | |short_description=p@chr17:25932584..25932609,- | ||
}} | }} |
Latest revision as of 11:16, 4 August 2015
Short description: | p@chr17:25932584..25932609, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:25932584..25932609, - |
Coexpression cluster: | MCL_coexpression_mm9:558 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.99e-28 | 44 |
neurectodermal cell | 2.99e-28 | 44 |
neural cell | 1.17e-26 | 43 |
neuron | 6.77e-19 | 33 |
neuronal stem cell | 6.77e-19 | 33 |
neuroblast | 6.77e-19 | 33 |
electrically signaling cell | 6.77e-19 | 33 |
autonomic neuron | 7.73e-18 | 9 |
electrically responsive cell | 3.69e-15 | 39 |
electrically active cell | 3.69e-15 | 39 |
embryonic cell | 5.63e-15 | 70 |
migratory neural crest cell | 1.44e-08 | 10 |
neuron associated cell | 1.44e-08 | 10 |
glial cell (sensu Vertebrata) | 1.44e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.44e-08 | 10 |
glial cell | 1.44e-08 | 10 |
glioblast | 1.44e-08 | 10 |
glioblast (sensu Vertebrata) | 1.44e-08 | 10 |
oligodendrocyte precursor cell | 2.60e-08 | 8 |
neuron of the substantia nigra | 6.35e-07 | 3 |