FFCP PHASE1:Mm9::chr10:53470899..53470970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75906 | |EntrezGene=75906 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=93 | |MCL_coexpression_id=93 | ||
|TSSclassifier=NA | |||
|UniProt=E9PW83,Q9D5H9 | |UniProt=E9PW83,Q9D5H9 | ||
|association_with_transcript=-184bp_to_ENSMUST00000170839,NM_001081428,uc007fbu.1,uc007fbv.1_5end | |association_with_transcript=-184bp_to_ENSMUST00000170839,NM_001081428,uc007fbu.1,uc007fbv.1_5end | ||
|cluster_id=chr10:53470899..53470970,- | |||
|description=CAGE_peak_2_at_Fam184a_5end | |description=CAGE_peak_2_at_Fam184a_5end | ||
|id=chr10:53470899..53470970,- | |id=chr10:53470899..53470970,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.30e-18!63;UBERON:0002346!6.38e-17!71;UBERON:0003075!6.38e-17!71;UBERON:0007284!6.38e-17!71;UBERON:0001049!8.79e-15!52;UBERON:0005068!8.79e-15!52;UBERON:0006241!8.79e-15!52;UBERON:0007135!8.79e-15!52;UBERON:0000955!1.98e-14!50;UBERON:0006238!1.98e-14!50;UBERON:0003056!2.98e-14!49;UBERON:0001017!4.50e-14!73;UBERON:0005743!4.50e-14!73;UBERON:0004121!6.60e-14!102;UBERON:0000924!6.60e-14!102;UBERON:0006601!6.60e-14!102;UBERON:0000073!8.10e-14!75;UBERON:0001016!8.10e-14!75;UBERON:0002616!9.02e-14!49;UBERON:0003080!1.43e-10!40;UBERON:0002780!5.38e-10!39;UBERON:0001890!5.38e-10!39;UBERON:0006240!5.38e-10!39;UBERON:0002020!8.56e-09!34;UBERON:0004111!8.69e-09!122;UBERON:0000025!2.74e-08!114;UBERON:0000468!1.81e-07!333;UBERON:0000489!5.78e-07!21;UBERON:0000475!7.12e-07!200;UBERON:0002791!7.62e-07!29;UBERON:0003528!7.62e-07!29;UBERON:0001893!7.62e-07!29 | |ontology_enrichment_uberon=UBERON:0000033!5.30e-18!63;UBERON:0002346!6.38e-17!71;UBERON:0003075!6.38e-17!71;UBERON:0007284!6.38e-17!71;UBERON:0001049!8.79e-15!52;UBERON:0005068!8.79e-15!52;UBERON:0006241!8.79e-15!52;UBERON:0007135!8.79e-15!52;UBERON:0000955!1.98e-14!50;UBERON:0006238!1.98e-14!50;UBERON:0003056!2.98e-14!49;UBERON:0001017!4.50e-14!73;UBERON:0005743!4.50e-14!73;UBERON:0004121!6.60e-14!102;UBERON:0000924!6.60e-14!102;UBERON:0006601!6.60e-14!102;UBERON:0000073!8.10e-14!75;UBERON:0001016!8.10e-14!75;UBERON:0002616!9.02e-14!49;UBERON:0003080!1.43e-10!40;UBERON:0002780!5.38e-10!39;UBERON:0001890!5.38e-10!39;UBERON:0006240!5.38e-10!39;UBERON:0002020!8.56e-09!34;UBERON:0004111!8.69e-09!122;UBERON:0000025!2.74e-08!114;UBERON:0000468!1.81e-07!333;UBERON:0000489!5.78e-07!21;UBERON:0000475!7.12e-07!200;UBERON:0002791!7.62e-07!29;UBERON:0003528!7.62e-07!29;UBERON:0001893!7.62e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.22e-19,64;UBERON:0003075,2.22e-19,64;UBERON:0007284,2.22e-19,64;UBERON:0000073,9.11e-18,54;UBERON:0001049,2.14e-16,52;UBERON:0005068,2.14e-16,52;UBERON:0006241,2.14e-16,52;UBERON:0007135,2.14e-16,52;UBERON:0010371,6.37e-16,73;UBERON:0003056,1.53e-15,49;UBERON:0001017,2.24e-14,73;UBERON:0010314,2.80e-14,92;UBERON:0000955,5.56e-14,47;UBERON:0006238,5.56e-14,47;UBERON:0001016,7.13e-14,75;UBERON:0004121,1.51e-13,95;UBERON:0000924,1.51e-13,95;UBERON:0006601,1.51e-13,95;UBERON:0002616,2.87e-13,46;UBERON:0003080,2.03e-11,40;UBERON:0002780,8.88e-11,39;UBERON:0001890,8.88e-11,39;UBERON:0006240,8.88e-11,39;UBERON:0002020,1.02e-09,34;UBERON:0004111,2.16e-08,122;UBERON:0000025,5.89e-08,114;UBERON:0003528,1.58e-07,29;UBERON:0002791,1.58e-07,29;UBERON:0001893,1.58e-07,29;UBERON:0002021,4.12e-07,10;UBERON:0000411,4.12e-07,10;UBERON:0001950,4.12e-07,10;UBERON:0000489,8.32e-07,21 | |||
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0.388859798148567,0.55994568650145,0,0,0,0,0.257259436035947,0.573066879877513,4.12537673821954,4.45096213891115,2.64495489636016,1.90149421051854,0,0,0,0,0,0,1.53687322128622,1.03689612308478,0.405017814995072,0.420649922702764,3.14216082844184,3.53389665522582,1.71487118900936,0.383381884072945,0,8.8092704799511,9.57655035638908,10.752457327937,2.1101806036831,2.37867873366265,5.2091337055676,4.74611098302348,10.1297269805702,10.3902808488231,7.36571463684169,9.8236459751381,3.91438836233131,0.605809546665472,1.36028808192214,1.15945795480671,0,0,0.539703191637817,0,0,1.54488862144927,0,0,0,4.92951969218382,0,0,0,1.29894624606728,0.506719730950197,0.505524445014783,1.7127581957859,0.258937883647172,1.63286352971307,2.08182392119363,0.913396434936424,0.922461989024234,0.904335843315735,1.05829836422134,0.502666365318702,0.494389935468748,0.578397427679647,0,0.808834249737046,0.662524555381181,0,0,18.4451902117275,14.6612694769419,0.510914110417183,0.239630249011841,0,0.254140454146129,10.4853447583376,12.3525162761029,4.77486538028885,6.43149984711423,5.37002460393694,5.81806524766768,13.6282660976916,1.62942982160506,0.870848794270651,5.05445516867349,5.47148825304832,3.77349284591841,2.5289231487682,2.52086981727489,3.31550599238573,6.32739442107349,3.84341160854549,5.90320864726292,15.78090561508,0,1.70195472151037,2.99116911078713,1.53437012699302,3.89266148915837,1.39300866608867,1.23469281844766,1.39323986772945,0,0.51469581422943,0.284163499395593,0.828503090142008,1.40715635988658,1.08037236876609,0.473489471170421,1.37734962223183,1.69693824176116,1.62773761325285,1.87791380979733,1.86824547787471,1.31647879930784,0.820837320395476,0.56748166682099,0.877199924551994,0.878200461164203,1.07365135008297,7.99101804543684,3.80747065803352,0,0,2.34617075588757,1.39342003116263,1.15980715189884,1.00841762311671,1.11189021922435,1.14135375667535,0.474529061544512,0.658795818896044,0.754005626400808,1.39269530428806,0.974820435595601,1.79763881730844,0.432276099749388,0.199141273254367,0.948339504765408,1.48523066392647,3.38123207019241,2.8511185898344,2.13347735884388,3.50679099451593,4.11037491307672,5.31396532726568,7.22194148070324,7.15703550746443,0.296452627087149,0.500535317148282,0.589676985339609,0,0.202860121388503,0,0.763877555344259,0.575392274901621,0.324270453550071,0,0,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,4.80358294433172,1.13694847062291,1.30371981153621,1.52770577197669,1.64283173801951,3.1826188913945,4.99891645860629,8.39074685788535,3.94087860265477,3.76489972402917,5.26200736569707,6.06294264448231,4.14443956478149,4.91806799177139,0,0,0,0.551873492609465,10.1146871692309,11.9555920324047,0,0.504941854408746,0.631016438832513,0.390438744296638,1.50796378412959,0.477937595905104,0.891194696329576,0.566153061577665,1.21443210502468,0.584511715822624,0.395287777946524,55.2672664245508,1.84522110770749,1.42452482933804,3.4206261464251,3.95928295134085,3.98235415019888,0.485561272309963,0.604647113929502,1.32023555829129,0.885905678642318,1.84461088766356,2.58428293168221,2.18120237686503,1.78248689192361,4.74055136903724,1.05418608574999,4.12542172992747,3.74483566329167,2.16073312837572,0.646793418913773,4.28674070063185,6.0295679438373,6.0645397984704,4.11372551505302,2.43571959291679,1.17335854031855,3.1774810629573,1.98475558249466,0.65954501176592,0.322928853391811,0.482503399425247,0.716234064018819,0.164140899745061,0.291480836629851,10.5692422145991,0,2.88941615148511,1.29636169158798,0.376736914009382,0.27338845544205,0.228778173206523,1.01987057996313,1.25956307091292,1.24379976423981,0.954670618015114,1.42351197111511,1.21991680276109,0.756037385752609,0.836353184057875,1.09181281873089,0.944050424693745,1.90102948168273,1.83229159388821,0.777689839750757,0.621339313086926,1.12738587736838,1.64468200648377,0.165458490457098,0.388902376688095,0.258319646955462,1.01373675294467,1.17357238645754,1.5624526181274,1.25831213310853,0.724752362478018,2.88030006257865,0.948033361884535,0.405450430580328,0,0.389762468933385,0,0,0,0,0.100966449948148,0.228620419965,0.302478555410522,0.194915761479505,0.288635524920988,0.350630706544707,0,0.443971906748129,0.538283139656854,0,1.54551675225752,1.68914227906064,0,0.428736758158132,3.51100472824754,3.95326289831947,8.28585425712918,5.72895513439397,7.21783365843488,6.85082519770642,4.5323633843382,6.07520250208625,5.85417564191487,5.43770890781046,8.28416498802912,0.830298780673413,0,0.853668028770671,0.972426868273176,1.25767897576789,2.20612210140017,1.11123363900808,1.44224540067226,1.92551525755089,2.02157769411038,1.52087579934144,1.69763707247469,1.591905626988,1.47257850531199,1.60819313075717,1.90517476513229,2.66533949673168,1.54327376370964,0.824171801606613,1.61918812147837,2.05721551431249,1.24233064311536,1.90748951957857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| ||
|short_description=p2@Fam184a | |short_description=p2@Fam184a | ||
}} | }} |
Latest revision as of 02:11, 26 September 2015
Short description: | p2@Fam184a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam184a_5end |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | -184bp_to_ENSMUST00000170839, NM_001081428, uc007fbu.1, uc007fbv.1_5end |
EntrezGene: | Fam184a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.22e-19 | 64 |
neural plate | 2.22e-19 | 64 |
presumptive neural plate | 2.22e-19 | 64 |
regional part of nervous system | 9.11e-18 | 54 |
neural tube | 2.14e-16 | 52 |
neural rod | 2.14e-16 | 52 |
future spinal cord | 2.14e-16 | 52 |
neural keel | 2.14e-16 | 52 |
ecto-epithelium | 6.37e-16 | 73 |
pre-chordal neural plate | 1.53e-15 | 49 |
central nervous system | 2.24e-14 | 73 |
structure with developmental contribution from neural crest | 2.80e-14 | 92 |
brain | 5.56e-14 | 47 |
future brain | 5.56e-14 | 47 |
nervous system | 7.13e-14 | 75 |
ectoderm-derived structure | 1.51e-13 | 95 |
ectoderm | 1.51e-13 | 95 |
presumptive ectoderm | 1.51e-13 | 95 |
regional part of brain | 2.87e-13 | 46 |
anterior neural tube | 2.03e-11 | 40 |
regional part of forebrain | 8.88e-11 | 39 |
forebrain | 8.88e-11 | 39 |
future forebrain | 8.88e-11 | 39 |
gray matter | 1.02e-09 | 34 |
anatomical conduit | 2.16e-08 | 122 |
tube | 5.89e-08 | 114 |
brain grey matter | 1.58e-07 | 29 |
regional part of telencephalon | 1.58e-07 | 29 |
telencephalon | 1.58e-07 | 29 |
occipital lobe | 4.12e-07 | 10 |
visual cortex | 4.12e-07 | 10 |
neocortex | 4.12e-07 | 10 |
cavitated compound organ | 8.32e-07 | 21 |