FFCP PHASE1:Mm9::chr1:196843610..196843625,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320977 | |EntrezGene=320977 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=278 | |MCL_coexpression_id=278 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENSMUST00000165871,NR_015566,uc007eer.2_5end | |association_with_transcript=17bp_to_ENSMUST00000165871,NR_015566,uc007eer.2_5end | ||
|cluster_id=chr1:196843610..196843625,+ | |||
|description=CAGE_peak_3_at_A330023F24Rik_5end | |description=CAGE_peak_3_at_A330023F24Rik_5end | ||
|id=chr1:196843610..196843625,+ | |id=chr1:196843610..196843625,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.09e-15!51;UBERON:0004111!7.22e-13!122;UBERON:0000955!6.74e-12!50;UBERON:0006238!6.74e-12!50;UBERON:0000033!2.52e-11!63;UBERON:0002616!4.24e-11!49;UBERON:0000025!2.11e-10!114;UBERON:0002021!9.45e-10!10;UBERON:0000411!9.45e-10!10;UBERON:0001950!9.45e-10!10;UBERON:0001049!7.15e-09!52;UBERON:0005068!7.15e-09!52;UBERON:0006241!7.15e-09!52;UBERON:0007135!7.15e-09!52;UBERON:0000475!3.14e-08!200;UBERON:0000062!1.65e-07!269;UBERON:0000477!1.88e-07!154;UBERON:0003080!3.72e-07!40;UBERON:0000073!8.04e-07!75;UBERON:0001016!8.04e-07!75;UBERON:0002346!9.31e-07!71;UBERON:0003075!9.31e-07!71;UBERON:0007284!9.31e-07!71;UBERON:0001017!9.74e-07!73;UBERON:0005743!9.74e-07!73 | |ontology_enrichment_uberon=UBERON:0007023!4.09e-15!51;UBERON:0004111!7.22e-13!122;UBERON:0000955!6.74e-12!50;UBERON:0006238!6.74e-12!50;UBERON:0000033!2.52e-11!63;UBERON:0002616!4.24e-11!49;UBERON:0000025!2.11e-10!114;UBERON:0002021!9.45e-10!10;UBERON:0000411!9.45e-10!10;UBERON:0001950!9.45e-10!10;UBERON:0001049!7.15e-09!52;UBERON:0005068!7.15e-09!52;UBERON:0006241!7.15e-09!52;UBERON:0007135!7.15e-09!52;UBERON:0000475!3.14e-08!200;UBERON:0000062!1.65e-07!269;UBERON:0000477!1.88e-07!154;UBERON:0003080!3.72e-07!40;UBERON:0000073!8.04e-07!75;UBERON:0001016!8.04e-07!75;UBERON:0002346!9.31e-07!71;UBERON:0003075!9.31e-07!71;UBERON:0007284!9.31e-07!71;UBERON:0001017!9.74e-07!73;UBERON:0005743!9.74e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.30e-16,51;UBERON:0000955,5.60e-12,47;UBERON:0006238,5.60e-12,47;UBERON:0000073,4.60e-11,54;UBERON:0002616,8.34e-11,46;UBERON:0001049,2.13e-10,52;UBERON:0005068,2.13e-10,52;UBERON:0006241,2.13e-10,52;UBERON:0007135,2.13e-10,52;UBERON:0002346,1.30e-09,64;UBERON:0003075,1.30e-09,64;UBERON:0007284,1.30e-09,64;UBERON:0004121,4.17e-09,95;UBERON:0000924,4.17e-09,95;UBERON:0006601,4.17e-09,95;UBERON:0001017,4.94e-09,73;UBERON:0001016,1.18e-08,75;UBERON:0010371,7.87e-08,73;UBERON:0010314,9.85e-08,92;UBERON:0004111,2.21e-07,122;UBERON:0003080,2.28e-07,40;UBERON:0003056,2.48e-07,49;UBERON:0002021,5.00e-07,10;UBERON:0000411,5.00e-07,10;UBERON:0001950,5.00e-07,10 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,3.30347642998166,1.0214987046815,0.768032666281217,0,0,0,0.558365998002762,1.12552522006336,0.45839474333043,0,0,0,0.075726193333184,0,0.579728977403356,0.860423876981386,0,1.61910957491345,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.445326417194474,0,0,0,0,0,0.125666591329675,0,0.86759614151947,0,0,0.662524555381181,0.969750506270444,0,3.22058876712702,1.25668024088073,0,0,0,0,3.74476598512057,2.28750301409313,0,1.39059456153821,2.30143911597297,2.28566849015516,2.27137768294861,0,0.746441823660558,1.76905930903572,1.47309299120532,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.56748166682099,1.75439984910399,0.658650345873152,2.95254121272818,1.68231958851302,0,2.31293148088659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442830443938806,0.941992367048249,2.34454611451421,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.964887042726734,0.739012760666419,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,2.40825884981688,1.28932855251423,0,2.27223834483936,0,0,0,0,0,0,0,0,0,2.57057053137446,0.425820255624806,0,0,1.48473110675282,5.30980553359851,0,0,0,0,0,0,0,0,2.52829406348653,2.10837217149998,3.09406629744561,7.14923172082955,0,0,0,0,0,0,0.913394847343798,0,0,2.64634077665954,0.32977250588296,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,3.17422537061296,0,0,0,0.772758376128762,0.93841237725591,0.73260649706906,0,3.00943262421218,1.12950368523413,0.920650473014354,0.572895513439397,1.54667864109319,0.685082519770642,0.755393897389701,2.70009000092722,2.2516060161211,1.35942722695261,3.10656187051092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,3.30347642998166,1.0214987046815,0.768032666281217,0,0,0,0.558365998002762,1.12552522006336,0.45839474333043,0,0,0,0.075726193333184,0,0.579728977403356,0.860423876981386,0,1.61910957491345,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.445326417194474,0,0,0,0,0,0.125666591329675,0,0.86759614151947,0,0,0.662524555381181,0.969750506270444,0,3.22058876712702,1.25668024088073,0,0,0,0,3.74476598512057,2.28750301409313,0,1.39059456153821,2.30143911597297,2.28566849015516,2.27137768294861,0,0.746441823660558,1.76905930903572,1.47309299120532,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.56748166682099,1.75439984910399,0.658650345873152,2.95254121272818,1.68231958851302,0,2.31293148088659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442830443938806,0.941992367048249,2.34454611451421,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0.964887042726734,0.739012760666419,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,2.40825884981688,1.28932855251423,0,2.27223834483936,0,0,0,0,0,0,0,0,0,2.57057053137446,0.425820255624806,0,0,1.48473110675282,5.30980553359851,0,0,0,0,0,0,0,0,2.52829406348653,2.10837217149998,3.09406629744561,7.14923172082955,0,0,0,0,0,0,0.913394847343798,0,0,2.64634077665954,0.32977250588296,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,3.17422537061296,0,0,0,0.772758376128762,0.93841237725591,0.73260649706906,0,3.00943262421218,1.12950368523413,0.920650473014354,0.572895513439397,1.54667864109319,0.685082519770642,0.755393897389701,2.70009000092722,2.2516060161211,1.35942722695261,3.10656187051092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p3@A330023F24Rik | |short_description=p3@A330023F24Rik | ||
}} | }} |
Latest revision as of 00:49, 27 September 2015
Short description: | p3@A330023F24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_A330023F24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | 17bp_to_ENSMUST00000165871, NR_015566, uc007eer.2_5end |
EntrezGene: | A330023F24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.30e-16 | 51 |
brain | 5.60e-12 | 47 |
future brain | 5.60e-12 | 47 |
regional part of nervous system | 4.60e-11 | 54 |
regional part of brain | 8.34e-11 | 46 |
neural tube | 2.13e-10 | 52 |
neural rod | 2.13e-10 | 52 |
future spinal cord | 2.13e-10 | 52 |
neural keel | 2.13e-10 | 52 |
neurectoderm | 1.30e-09 | 64 |
neural plate | 1.30e-09 | 64 |
presumptive neural plate | 1.30e-09 | 64 |
ectoderm-derived structure | 4.17e-09 | 95 |
ectoderm | 4.17e-09 | 95 |
presumptive ectoderm | 4.17e-09 | 95 |
central nervous system | 4.94e-09 | 73 |
nervous system | 1.18e-08 | 75 |
ecto-epithelium | 7.87e-08 | 73 |
structure with developmental contribution from neural crest | 9.85e-08 | 92 |
anatomical conduit | 2.21e-07 | 122 |
anterior neural tube | 2.28e-07 | 40 |
pre-chordal neural plate | 2.48e-07 | 49 |
occipital lobe | 5.00e-07 | 10 |
visual cortex | 5.00e-07 | 10 |
neocortex | 5.00e-07 | 10 |