FFCP PHASE1:Hg19::chr2:145274805..145274825,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:145274805..145274825,-
|short_description=p35@ZEB2
|description=CAGE_peak_35_at_ZEB2_5end
|association_with_transcript=-477bp_to_ENST00000479735_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9839 | |EntrezGene=9839 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14881 | |HGNC=14881 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-477bp_to_ENST00000479735_5end | |||
|cluster_id=chr2:145274805..145274825,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_35_at_ZEB2_5end | |||
|id=chr2:145274805..145274825,- | |||
|ontology_enrichment_celltype=CL:0002057!1.57e-31!42;CL:0000860!4.20e-30!45;CL:0000766!6.40e-29!76;CL:0000839!9.55e-26!70;CL:0000557!7.17e-24!71;CL:0002194!2.11e-22!63;CL:0000576!2.11e-22!63;CL:0000040!2.11e-22!63;CL:0000559!2.11e-22!63;CL:0002009!2.63e-21!65;CL:0000763!7.02e-21!112;CL:0000049!7.02e-21!112;CL:0000738!1.81e-19!140;CL:0000037!1.44e-16!172;CL:0000566!1.44e-16!172;CL:0000988!5.32e-16!182;CL:0002031!5.51e-16!124;CL:0002087!1.25e-15!119;CL:0002032!1.52e-15!165;CL:0000837!1.52e-15!165;CL:0000134!1.05e-09!358;CL:0002320!1.71e-09!365;CL:0000219!1.04e-08!390;CL:0002393!4.02e-07!9;CL:0002397!4.02e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.43e-39;33!CL:0002057;4.43e-39;33!CL:0000473;1.92e-26;39!CL:0000234;1.92e-26;39!CL:0000576;1.34e-25;48!CL:0000766;7.75e-18;69!CL:0000771;1.32e-16;2!CL:0002393;2.62e-12;6!CL:0002397;2.62e-12;6!CL:0000763;3.68e-11;100!CL:0000094;3.71e-09;8!CL:0002087;5.50e-07;104!CL:0000081;8.87e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.65e-48,42;CL:0002057,5.65e-48,42;CL:0000473,1.37e-41,48;CL:0000234,1.37e-41,48;CL:0000766,3.19e-41,72;CL:0002194,1.20e-32,59;CL:0000576,1.20e-32,59;CL:0000040,1.20e-32,59;CL:0000559,1.20e-32,59;CL:0000839,1.59e-32,66;CL:0000557,5.35e-32,67;CL:0002009,1.71e-31,61;CL:0000763,2.92e-29,108;CL:0000049,2.92e-29,108;CL:0000738,3.28e-20,136;CL:0002032,2.08e-18,161;CL:0000837,2.08e-18,161;CL:0000037,1.75e-17,168;CL:0000771,1.27e-16,2;CL:0002031,1.63e-16,120;CL:0000988,2.13e-16,177;CL:0002087,2.38e-15,115;CL:0000094,3.66e-09,8;CL:0002393,2.35e-08,9;CL:0002397,2.35e-08,9;CL:0000134,6.35e-08,354;CL:0000219,1.01e-07,386;CL:0002320,1.10e-07,361;CL:0000081,8.79e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.56e-36;42!CL:0000049;4.05e-09;108!UBERON:0005425;1.13e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.83e-24!102;UBERON:0003061!3.83e-24!102;UBERON:0002371!8.24e-22!80;UBERON:0002193!1.56e-21!112;UBERON:0001474!2.98e-19!86;UBERON:0004765!4.45e-15!101;UBERON:0001434!4.45e-15!101;UBERON:0002405!4.67e-15!115;UBERON:0003081!3.81e-10!216;UBERON:0002384!1.40e-08!375;UBERON:0002204!4.60e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.13e-08;1!UBERON:0001785;1.13e-08;1!UBERON:0002464;1.13e-08;1!UBERON:0004904;1.13e-08;1!UBERON:0001021;1.13e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.18e-28,76;UBERON:0001474,1.29e-25,82;UBERON:0002390,1.66e-23,98;UBERON:0003061,1.66e-23,98;UBERON:0004765,4.54e-23,90;UBERON:0002405,3.17e-22,93;UBERON:0002193,4.99e-21,108;UBERON:0001434,1.88e-20,100;UBERON:0002204,6.05e-11,167;UBERON:0003081,1.41e-09,203;UBERON:0000941,8.36e-09,1;UBERON:0001785,8.36e-09,1;UBERON:0002464,8.36e-09,1;UBERON:0004904,8.36e-09,1;UBERON:0001021,8.36e-09,1;UBERON:0003902,8.36e-09,1;UBERON:0005425,8.36e-09,1;UBERON:0002384,2.32e-07,371 | |||
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| ||
|short_description=p35@ZEB2 | |||
}} | }} |
Latest revision as of 07:36, 17 September 2015
Short description: | p35@ZEB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_ZEB2_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -477bp_to_ENST00000479735_5end |
EntrezGene: | ZEB2 |
HGNC: | 14881 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.65e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.65e-48 | 42 |
defensive cell | 1.37e-41 | 48 |
phagocyte | 1.37e-41 | 48 |
myeloid leukocyte | 3.19e-41 | 72 |
monopoietic cell | 1.20e-32 | 59 |
monocyte | 1.20e-32 | 59 |
monoblast | 1.20e-32 | 59 |
promonocyte | 1.20e-32 | 59 |
myeloid lineage restricted progenitor cell | 1.59e-32 | 66 |
granulocyte monocyte progenitor cell | 5.35e-32 | 67 |
macrophage dendritic cell progenitor | 1.71e-31 | 61 |
myeloid cell | 2.92e-29 | 108 |
common myeloid progenitor | 2.92e-29 | 108 |
leukocyte | 3.28e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.08e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-18 | 161 |
hematopoietic stem cell | 1.75e-17 | 168 |
eosinophil | 1.27e-16 | 2 |
hematopoietic lineage restricted progenitor cell | 1.63e-16 | 120 |
hematopoietic cell | 2.13e-16 | 177 |
nongranular leukocyte | 2.38e-15 | 115 |
granulocyte | 3.66e-09 | 8 |
intermediate monocyte | 2.35e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.35e-08 | 9 |
mesenchymal cell | 6.35e-08 | 354 |
motile cell | 1.01e-07 | 386 |
connective tissue cell | 1.10e-07 | 361 |
blood cell | 8.79e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.18e-28 | 76 |
bone element | 1.29e-25 | 82 |
hematopoietic system | 1.66e-23 | 98 |
blood island | 1.66e-23 | 98 |
skeletal element | 4.54e-23 | 90 |
immune system | 3.17e-22 | 93 |
hemolymphoid system | 4.99e-21 | 108 |
skeletal system | 1.88e-20 | 100 |
musculoskeletal system | 6.05e-11 | 167 |
lateral plate mesoderm | 1.41e-09 | 203 |
cranial nerve II | 8.36e-09 | 1 |
cranial nerve | 8.36e-09 | 1 |
nerve trunk | 8.36e-09 | 1 |
nerve connecting eye with brain | 8.36e-09 | 1 |
nerve | 8.36e-09 | 1 |
retinal neural layer | 8.36e-09 | 1 |
presumptive neural retina | 8.36e-09 | 1 |
connective tissue | 2.32e-07 | 371 |