FFCP PHASE1:Hg19::chr2:144004853..144004865,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:144004853..144004865,+
|short_description=p8@ARHGAP15
|description=CAGE_peak_8_at_ARHGAP15_5end
|association_with_transcript=0bp_to_ENST00000469117_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55843 | |EntrezGene=55843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21030 | |HGNC=21030 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469117_5end | |||
|cluster_id=chr2:144004853..144004865,+ | |||
|coexpression_cluster_id=C1370 | |||
|description=CAGE_peak_8_at_ARHGAP15_5end | |||
|id=chr2:144004853..144004865,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.28e-32!18;CL:0000789!1.28e-32!18;CL:0002420!1.28e-32!18;CL:0002419!1.28e-32!18;CL:0000790!1.28e-32!18;CL:0000625!4.29e-23!11;CL:0000738!6.02e-23!140;CL:0000084!6.22e-22!25;CL:0000827!6.22e-22!25;CL:0002087!4.72e-17!119;CL:0000037!5.01e-16!172;CL:0000566!5.01e-16!172;CL:0002031!1.36e-15!124;CL:0000988!2.17e-14!182;CL:0002032!1.57e-13!165;CL:0000837!1.57e-13!165;CL:0000624!2.20e-13!6;CL:0000838!4.78e-13!52;CL:0000542!1.11e-12!53;CL:0000051!1.11e-12!53;CL:0000766!1.49e-07!76;CL:0000623!1.75e-07!3;CL:0000825!1.75e-07!3;CL:0000898!2.94e-07!3;CL:0000842!2.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.72e-61;18!CL:0000789;1.72e-61;18!CL:0002419;1.72e-61;18!CL:0000084;4.84e-43;25!CL:0000625;1.00e-42;11!CL:0000624;4.11e-24;6!CL:0000542;3.23e-13;53!CL:0000623;7.35e-13;3!CL:0000898;1.85e-12;3!CL:0000226;2.52e-12;3!CL:0000842;2.52e-12;3!CL:0000815;1.28e-08;2!CL:0000792;1.28e-08;2!CL:0002677;1.28e-08;2!CL:0002087;6.92e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.01e-61,18;CL:0000789,2.01e-61,18;CL:0002420,2.01e-61,18;CL:0002419,2.01e-61,18;CL:0000790,2.01e-61,18;CL:0000084,5.40e-43,25;CL:0000827,5.40e-43,25;CL:0000625,1.11e-42,11;CL:0000838,3.02e-26,52;CL:0000542,1.18e-25,53;CL:0000051,1.18e-25,53;CL:0000624,4.37e-24,6;CL:0000738,1.14e-21,136;CL:0002087,6.78e-20,115;CL:0000037,4.28e-16,168;CL:0002031,1.18e-15,120;CL:0000988,6.82e-15,177;CL:0002032,2.53e-13,161;CL:0000837,2.53e-13,161;CL:0000623,7.65e-13,3;CL:0000825,7.65e-13,3;CL:0000226,2.04e-12,3;CL:0000898,2.04e-12,3;CL:0000842,2.04e-12,3;CL:0000815,1.41e-08,2;CL:0000792,1.41e-08,2;CL:0002677,1.41e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.72e-61;18!CL:0000051;3.23e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.94e-18!15;UBERON:0000179!9.94e-18!15;UBERON:0000463!9.94e-18!15;UBERON:0002390!5.87e-14!102;UBERON:0003061!5.87e-14!102;UBERON:0002193!8.24e-13!112;UBERON:0007023!9.51e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.62e-23;15!UBERON:0000179;1.62e-23;15!UBERON:0000463;1.62e-23;15!UBERON:0002390;2.04e-11;32!UBERON:0002193;9.66e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.07e-23,15;UBERON:0000179,1.07e-23,15;UBERON:0000463,1.07e-23,15;UBERON:0002390,4.36e-08,98;UBERON:0003061,4.36e-08,98;UBERON:0002193,6.41e-08,108 | |||
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| ||
|short_description=p8@ARHGAP15 | |||
}} | }} |
Latest revision as of 06:07, 17 September 2015
Short description: | p8@ARHGAP15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGAP15_5end |
Coexpression cluster: | C1370_CD8_CD4_Natural_Peripheral_Whole_Basophils_blood |
Association with transcript: | 0bp_to_ENST00000469117_5end |
EntrezGene: | ARHGAP15 |
HGNC: | 21030 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.01e-61 | 18 |
alpha-beta T cell | 2.01e-61 | 18 |
immature T cell | 2.01e-61 | 18 |
mature T cell | 2.01e-61 | 18 |
immature alpha-beta T cell | 2.01e-61 | 18 |
T cell | 5.40e-43 | 25 |
pro-T cell | 5.40e-43 | 25 |
CD8-positive, alpha-beta T cell | 1.11e-42 | 11 |
lymphoid lineage restricted progenitor cell | 3.02e-26 | 52 |
lymphocyte | 1.18e-25 | 53 |
common lymphoid progenitor | 1.18e-25 | 53 |
CD4-positive, alpha-beta T cell | 4.37e-24 | 6 |
leukocyte | 1.14e-21 | 136 |
nongranular leukocyte | 6.78e-20 | 115 |
hematopoietic stem cell | 4.28e-16 | 168 |
hematopoietic lineage restricted progenitor cell | 1.18e-15 | 120 |
hematopoietic cell | 6.82e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.53e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.53e-13 | 161 |
natural killer cell | 7.65e-13 | 3 |
pro-NK cell | 7.65e-13 | 3 |
single nucleate cell | 2.04e-12 | 3 |
naive T cell | 2.04e-12 | 3 |
mononuclear cell | 2.04e-12 | 3 |
regulatory T cell | 1.41e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.41e-08 | 2 |
naive regulatory T cell | 1.41e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.07e-23 | 15 |
haemolymphatic fluid | 1.07e-23 | 15 |
organism substance | 1.07e-23 | 15 |
hematopoietic system | 4.36e-08 | 98 |
blood island | 4.36e-08 | 98 |
hemolymphoid system | 6.41e-08 | 108 |