FFCP PHASE1:Hg19::chr2:139538474..139538479,-: Difference between revisions
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|id=chr2:139538474..139538479,-
|short_description=p@chr2:139538474..139538479,-
|description=CAGE_peak_at_chr2:139538474..139538479,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:139538474..139538479,- | |||
|coexpression_cluster_id=C1263 | |||
|description=CAGE_peak_at_chr2:139538474..139538479,- | |||
|id=chr2:139538474..139538479,- | |||
|ontology_enrichment_celltype=CL:0000540!1.70e-10!6;CL:0000031!1.70e-10!6;CL:0000404!1.70e-10!6;CL:0000047!7.06e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.03e-12;15!CL:0000125;1.03e-12;15!CL:0000095;1.72e-11;17!CL:0002319;2.14e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.03e-12,15;CL:0000125,1.03e-12,15;CL:0000030,1.03e-12,15;CL:0000339,1.03e-12,15;CL:0000095,1.72e-11,17;CL:0000123,1.72e-11,17;CL:0002319,2.14e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.14e-19;10!CL:0000339;1.03e-12;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;1.57e-17;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.57e-17,11 | |||
|ontology_enrichment_uberon=UBERON:0005743!7.85e-51!86;UBERON:0001017!1.10e-50!82;UBERON:0000073!2.75e-45!94;UBERON:0001016!2.75e-45!94;UBERON:0002780!3.11e-42!41;UBERON:0001890!3.11e-42!41;UBERON:0006240!3.11e-42!41;UBERON:0001049!3.71e-41!57;UBERON:0005068!3.71e-41!57;UBERON:0006241!3.71e-41!57;UBERON:0007135!3.71e-41!57;UBERON:0003080!4.11e-41!42;UBERON:0001869!5.92e-41!32;UBERON:0002619!5.05e-39!22;UBERON:0000956!2.08e-38!25;UBERON:0000203!2.08e-38!25;UBERON:0001893!2.54e-38!34;UBERON:0000955!2.83e-38!69;UBERON:0006238!2.83e-38!69;UBERON:0002020!3.14e-38!34;UBERON:0003528!3.14e-38!34;UBERON:0001950!6.06e-38!20;UBERON:0002616!2.20e-36!59;UBERON:0002791!1.39e-35!33;UBERON:0002346!1.55e-32!90;UBERON:0003075!8.81e-32!86;UBERON:0007284!8.81e-32!86;UBERON:0003056!3.48e-29!61;UBERON:0007023!2.03e-27!115;UBERON:0000924!5.03e-24!173;UBERON:0006601!5.03e-24!173;UBERON:0004121!3.83e-23!169;UBERON:0000033!8.84e-22!123;UBERON:0000153!1.97e-20!129;UBERON:0007811!1.97e-20!129;UBERON:0000200!9.79e-16!6;UBERON:0002021!2.11e-12!5;UBERON:0001872!2.38e-12!5;UBERON:0000025!2.61e-09!194;UBERON:0001870!5.21e-09!2;UBERON:0002360!2.00e-08!2;UBERON:0000094!2.00e-08!2;UBERON:0007645!2.00e-08!2;UBERON:0001871!3.71e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.82e-14;4!UBERON:0000923;8.82e-14;4!UBERON:0010316;8.82e-14;4!UBERON:0005291;8.82e-14;4!UBERON:0002050;2.66e-11;5!UBERON:0005423;2.66e-11;5!UBERON:0001872;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,3.60e-11,5;UBERON:0000955,3.10e-07,68;UBERON:0006238,3.10e-07,68 | |||
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| ||
|short_description=p@chr2:139538474..139538479,- | |||
}} | }} |
Latest revision as of 00:43, 29 July 2015
Short description: | p@chr2:139538474..139538479, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:139538474..139538479, - |
Coexpression cluster: | C1263_neuroectodermal_glioblastoma_pons_pineal_parietal_rhabdomyosarcoma_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.03e-12 | 15 |
glial cell | 1.03e-12 | 15 |
glioblast | 1.03e-12 | 15 |
glioblast (sensu Vertebrata) | 1.03e-12 | 15 |
neuron associated cell | 1.72e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.72e-11 | 17 |
neural cell | 2.14e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 3.60e-11 | 5 |
brain | 3.10e-07 | 68 |
future brain | 3.10e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.57e-17 | 11 |