FFCP PHASE1:Hg19::chr2:139259617..139259622,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:139259617..139259622,+
|short_description=p8@SPOPL
|description=CAGE_peak_8_at_SPOPL_5end
|association_with_transcript=115bp_to_ENST00000430968_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=339745 | |EntrezGene=339745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27934 | |HGNC=27934 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBB7 | |UniProt=F8WBB7 | ||
|association_with_transcript=115bp_to_ENST00000430968_5end | |||
|cluster_id=chr2:139259617..139259622,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_8_at_SPOPL_5end | |||
|id=chr2:139259617..139259622,+ | |||
|ontology_enrichment_celltype=CL:0000763!7.09e-10!112;CL:0000049!7.09e-10!112;CL:0000766!1.72e-09!76;CL:0000775!1.82e-08!3;CL:0000738!2.27e-08!140;CL:0000037!2.31e-08!172;CL:0000566!2.31e-08!172;CL:0000094!9.40e-08!8;CL:0002032!9.42e-08!165;CL:0000837!9.42e-08!165;CL:0000988!2.07e-07!182;CL:0000557!2.58e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000775;3.64e-60;3!CL:0001014;3.01e-40;2!CL:0001016;3.01e-40;2!CL:0000094;4.09e-40;8!CL:0000081;2.45e-29;11!CL:0000511;6.98e-21;1!CL:0002625;6.98e-21;1!CL:0000216;6.98e-21;1!CL:0000453;8.82e-17;5!CL:0000840;3.71e-14;5!CL:0000771;2.60e-11;2!CL:0000990;9.24e-10;8!CL:0000451;3.76e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.65e-60,3;CL:0001014,3.01e-40,2;CL:0001016,3.01e-40,2;CL:0000094,4.30e-40,8;CL:0000081,2.54e-29,11;CL:0000511,5.16e-21,1;CL:0002625,5.16e-21,1;CL:0000216,5.16e-21,1;CL:0000453,8.82e-17,5;CL:0000840,3.71e-14,5;CL:0001029,3.71e-14,5;CL:0000763,2.48e-11,108;CL:0000049,2.48e-11,108;CL:0000771,2.73e-11,2;CL:0000990,9.24e-10,8;CL:0000451,3.76e-08,10;CL:0002032,1.76e-07,161;CL:0000837,1.76e-07,161;CL:0000037,3.77e-07,168;CL:0000766,5.75e-07,72;CL:0000738,7.13e-07,136;CL:0000988,9.21e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!9.11e-10!4;DOID:1612!9.11e-10!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.04e-09!102;UBERON:0003061!4.04e-09!102;UBERON:0002193!1.05e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.98e-21;1!UBERON:0001343;6.98e-21;1!UBERON:0004910;6.98e-21;1!UBERON:0004813;6.98e-21;1!UBERON:0004909;3.89e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.16e-21,1;UBERON:0001343,5.16e-21,1;UBERON:0004910,5.16e-21,1;UBERON:0005154,5.16e-21,1;UBERON:0005295,5.16e-21,1;UBERON:0004813,5.16e-21,1;UBERON:0005297,5.16e-21,1;UBERON:0005294,5.16e-21,1;UBERON:0010141,5.16e-21,1;UBERON:0005891,5.16e-21,1;UBERON:0004909,3.35e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0,0,0.65156653411535,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,12.3165809473986,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,3.74503511973591,2.99161459204025,2.48649308061621,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.407712618220842,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,2.69968669861801,1.5476039091159,0,0,0,0,0,0,0.383830394638891,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0,0,0.65156653411535,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,12.3165809473986,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,3.74503511973591,2.99161459204025,2.48649308061621,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0.407712618220842,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,2.69968669861801,1.5476039091159,0,0,0,0,0,0,0.383830394638891,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p8@SPOPL | |||
}} | }} |
Latest revision as of 04:11, 17 September 2015
Short description: | p8@SPOPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPOPL_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 115bp_to_ENST00000430968_5end |
EntrezGene: | SPOPL |
HGNC: | 27934 |
UniProt: | F8WBB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.65e-60 | 3 |
CD1a-positive Langerhans cell | 3.01e-40 | 2 |
immature CD1a-positive Langerhans cell | 3.01e-40 | 2 |
granulocyte | 4.30e-40 | 8 |
blood cell | 2.54e-29 | 11 |
androgen binding protein secreting cell | 5.16e-21 | 1 |
seminiferous tubule epithelial cell | 5.16e-21 | 1 |
Sertoli cell | 5.16e-21 | 1 |
Langerhans cell | 8.82e-17 | 5 |
immature conventional dendritic cell | 3.71e-14 | 5 |
common dendritic progenitor | 3.71e-14 | 5 |
myeloid cell | 2.48e-11 | 108 |
common myeloid progenitor | 2.48e-11 | 108 |
eosinophil | 2.73e-11 | 2 |
conventional dendritic cell | 9.24e-10 | 8 |
dendritic cell | 3.76e-08 | 10 |
hematopoietic oligopotent progenitor cell | 1.76e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-07 | 161 |
hematopoietic stem cell | 3.77e-07 | 168 |
myeloid leukocyte | 5.75e-07 | 72 |
leukocyte | 7.13e-07 | 136 |
hematopoietic cell | 9.21e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.16e-21 | 1 |
seminiferous tubule of testis | 5.16e-21 | 1 |
epithelium of male gonad | 5.16e-21 | 1 |
epithelial cord | 5.16e-21 | 1 |
sex cord | 5.16e-21 | 1 |
seminiferous tubule epithelium | 5.16e-21 | 1 |
testis sex cord | 5.16e-21 | 1 |
genital ridge | 5.16e-21 | 1 |
primitive sex cord of indifferent gonad | 5.16e-21 | 1 |
coelomic epithelium | 5.16e-21 | 1 |
epithelium of gonad | 3.35e-11 | 2 |