FFCP PHASE1:Hg19::chr2:122247959..122247960,-: Difference between revisions
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|id=chr2:122247959..122247960,-
|short_description=p28@CLASP1
|description=CAGE_peak_28_at_CLASP1_5end
|association_with_transcript=-55bp_to_ENST00000430234,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23332 | |EntrezGene=23332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17088 | |HGNC=17088 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2E2 | |UniProt=F5H2E2 | ||
|association_with_transcript=-55bp_to_ENST00000430234,ENST00000545861,uc010yyw.1_5end | |||
|cluster_id=chr2:122247959..122247960,- | |||
|coexpression_cluster_id=C991 | |||
|description=CAGE_peak_28_at_CLASP1_5end | |||
|id=chr2:122247959..122247960,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.04e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002021;4.66e-21;5!UBERON:0002037;8.34e-18;6!UBERON:0002680;2.31e-12;9!UBERON:0001895;2.31e-12;9!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.15e-21,5;UBERON:0002037,7.67e-18,6;UBERON:0006215,7.67e-18,6;UBERON:0002680,2.19e-12,9;UBERON:0001895,2.19e-12,9;UBERON:0010092,2.19e-12,9;UBERON:0004733,1.22e-09,12;UBERON:0002028,1.22e-09,12;UBERON:0007277,1.22e-09,12;UBERON:0004732,5.28e-09,13;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003076,5.55e-08,15;UBERON:0003057,5.55e-08,15;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p28@CLASP1 | |||
}} | }} |
Latest revision as of 18:23, 16 September 2015
Short description: | p28@CLASP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_CLASP1_5end |
Coexpression cluster: | C991_cerebellum_occipital_thalamus_middle_medial_parietal_hippocampus |
Association with transcript: | -55bp_to_ENST00000430234, ENST00000545861, uc010yyw.1_5end |
EntrezGene: | CLASP1 |
HGNC: | 17088 |
UniProt: | F5H2E2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.15e-21 | 5 |
cerebellum | 7.67e-18 | 6 |
rhombic lip | 7.67e-18 | 6 |
regional part of metencephalon | 2.19e-12 | 9 |
metencephalon | 2.19e-12 | 9 |
future metencephalon | 2.19e-12 | 9 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |