FFCP PHASE1:Hg19::chr2:11674213..11674225,+: Difference between revisions
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|id=chr2:11674213..11674225,+
|short_description=p11@GREB1
|description=CAGE_peak_11_at_GREB1_5end
|association_with_transcript=-16bp_to_ENST00000381486,NM_014668,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9687 | |EntrezGene=9687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |HGNC=24885 | ||
|TSSclassifier=strong | |||
|UniProt=Q4ZG55 | |UniProt=Q4ZG55 | ||
|association_with_transcript=-16bp_to_ENST00000381486,NM_014668,uc002rbk.1_5end | |||
|cluster_id=chr2:11674213..11674225,+ | |||
|coexpression_cluster_id=C262 | |||
|description=CAGE_peak_11_at_GREB1_5end | |||
|id=chr2:11674213..11674225,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.88e-29!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.95e-25;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.01e-24,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.30e-19;1!UBERON:0005795;2.72e-08;10 | |||
|ontology_enrichment_disease=DOID:5093!1.68e-22!4;DOID:1612!1.68e-22!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.60e-41;4!DOID:1612;6.60e-41;4!DOID:171;3.44e-08;10!DOID:299;4.22e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.02e-41,4;DOID:1612,5.02e-41,4;DOID:171,3.50e-08,10;DOID:299,4.05e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.88e-29!3;UBERON:0000920!3.88e-29!3;UBERON:0003124!3.38e-22!7;UBERON:0005631!3.19e-11!14;UBERON:0000158!3.19e-11!14;UBERON:0001301!7.46e-11!1;UBERON:0000996!8.22e-11!1;UBERON:0001882!1.33e-10!1;UBERON:0005403!1.33e-10!1;UBERON:0002336!1.77e-10!1;UBERON:0001018!1.77e-10!1;UBERON:0002473!1.77e-10!1;UBERON:0005340!1.77e-10!1;UBERON:0002316!1.77e-10!1;UBERON:0003544!1.77e-10!1;UBERON:0001020!1.77e-10!1;UBERON:0005970!1.77e-10!1;UBERON:0002437!1.77e-10!1;UBERON:0000310!2.43e-09!10;UBERON:0001443!1.55e-08!11;UBERON:0005156!3.50e-07!59;UBERON:0000990!3.50e-07!59;UBERON:0003133!9.60e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;3.27e-33;5!UBERON:0005423;3.27e-33;5!UBERON:0003124;8.95e-25;3!UBERON:0000920;8.95e-25;3!UBERON:0005795;1.08e-19;1!UBERON:0002346;4.92e-19;4!UBERON:0000923;4.92e-19;4!UBERON:0010316;4.92e-19;4!UBERON:0005291;4.92e-19;4!UBERON:0000310;7.69e-17;10!UBERON:0001443;2.25e-15;11!UBERON:0005631;4.04e-08;10!UBERON:0000158;4.04e-08;10!UBERON:0000478;2.20e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.01e-24,3;UBERON:0003124,9.77e-24,7;UBERON:0000310,6.90e-17,10;UBERON:0001443,2.04e-15,11;UBERON:0005631,3.19e-12,14;UBERON:0000158,3.19e-12,14;UBERON:0005795,4.78e-08,22;UBERON:0000478,2.25e-07,24 | |||
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|short_description=p11@GREB1 | |||
}} | }} |
Latest revision as of 15:00, 16 September 2015
Short description: | p11@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GREB1_5end |
Coexpression cluster: | C262_breast_MCF7_skeletal_Reticulocytes_mucinous_hepatoblastoma_Wilms |
Association with transcript: | -16bp_to_ENST00000381486, NM_014668, uc002rbk.1_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | Q4ZG55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.01e-24 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.01e-24 | 3 |
chorion | 9.77e-24 | 7 |
breast | 6.90e-17 | 10 |
chest | 2.04e-15 | 11 |
extraembryonic membrane | 3.19e-12 | 14 |
membranous layer | 3.19e-12 | 14 |
embryonic uterus | 4.78e-08 | 22 |
extraembryonic structure | 2.25e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.02e-41 | 4 |
breast cancer | 5.02e-41 | 4 |
neuroectodermal tumor | 3.50e-08 | 10 |
adenocarcinoma | 4.05e-07 | 25 |