FF:1063-29H9: Difference between revisions

Latest revision as of 14:31, 3 June 2020

Name:	accessory axillary lymph node, adult
Species:	Mouse (Mus musculus)
Library ID:	CNhs10475
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	accessory axillary lymph node
dev stage	adult
sex	male
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005298

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10475		CAGE		DRX008926		DRR009800

Accession ID Mm9

Library id		BAM		CTSS
CNhs10475		DRZ001225		DRZ002608

Accession ID Mm10

Library id		BAM		CTSS
CNhs10475		DRZ012575		DRZ013958

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs10475

0	0
1	0
10	0
100	0
1000	0
1001	0.0725
1002	-0.116
1003	-0.123
1004	0
1005	0.228
1006	-0.143
1007	-0.0824
1008	0
1009	0.0497
101	0.223
1010	0
1011	0.221
1012	0.1
1013	0.00147
1014	-0.0874
1015	-0.147
1016	-0.272
1017	0
1018	0
1019	0
102	0.1
1020	0
1021	0.0513
1022	-0.124
1023	0.1
1024	0
1025	0
1026	0
1027	0
1028	0
1029	0.0304
103	-0.0787
1030	0.733
1031	-0.389
1032	-0.184
1033	0.145
1034	0
1035	0
1036	-0.00161
1037	0
1038	-0.194
1039	-0.153
104	0
1040	-0.0466
1041	0.361

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10475

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	2.16405e-9
MA0003.1	MA0003.1	0.64
MA0004.1	MA0004.1	0.644
MA0006.1	MA0006.1	0.188
MA0007.1	MA0007.1	0.93
MA0009.1	MA0009.1	0.804
MA0014.1	MA0014.1	0.528
MA0017.1	MA0017.1	0.879
MA0018.2	MA0018.2	0.269
MA0019.1	MA0019.1	0.143
MA0024.1	MA0024.1	0.557
MA0025.1	MA0025.1	0.924
MA0027.1	MA0027.1	0.823
MA0028.1	MA0028.1	7.00213e-5
MA0029.1	MA0029.1	0.432
MA0030.1	MA0030.1	0.369
MA0031.1	MA0031.1	0.829
MA0035.2	MA0035.2	0.732
MA0038.1	MA0038.1	0.557
MA0039.2	MA0039.2	0.455
MA0040.1	MA0040.1	0.52
MA0041.1	MA0041.1	0.67
MA0042.1	MA0042.1	0.692
MA0043.1	MA0043.1	0.832
MA0046.1	MA0046.1	4.31292e-11
MA0047.2	MA0047.2	0.969
MA0048.1	MA0048.1	0.49
MA0050.1	MA0050.1	9.44348e-24
MA0051.1	MA0051.1	2.5034e-15
MA0052.1	MA0052.1	0.0342
MA0055.1	MA0055.1	0.343
MA0057.1	MA0057.1	0.567
MA0058.1	MA0058.1	0.795
MA0059.1	MA0059.1	0.423
MA0060.1	MA0060.1	0.0396
MA0061.1	MA0061.1	4.50094e-14
MA0062.2	MA0062.2	2.54414e-26
MA0065.2	MA0065.2	0.897
MA0066.1	MA0066.1	0.299
MA0067.1	MA0067.1	0.368
MA0068.1	MA0068.1	0.0175
MA0069.1	MA0069.1	0.622
MA0070.1	MA0070.1	0.468
MA0071.1	MA0071.1	0.623
MA0072.1	MA0072.1	0.221
MA0073.1	MA0073.1	0.721
MA0074.1	MA0074.1	0.872
MA0076.1	MA0076.1	1.75874e-6
MA0077.1	MA0077.1	0.0281
MA0078.1	MA0078.1	0.58
MA0079.2	MA0079.2	0.22
MA0080.2	MA0080.2	4.7178e-16
MA0081.1	MA0081.1	3.73571e-4
MA0083.1	MA0083.1	0.27
MA0084.1	MA0084.1	0.569
MA0087.1	MA0087.1	0.391
MA0088.1	MA0088.1	0.346
MA0090.1	MA0090.1	0.00985
MA0091.1	MA0091.1	0.627
MA0092.1	MA0092.1	0.944
MA0093.1	MA0093.1	0.631
MA0099.2	MA0099.2	0.219
MA0100.1	MA0100.1	0.805
MA0101.1	MA0101.1	3.6079e-12
MA0102.2	MA0102.2	0.0798
MA0103.1	MA0103.1	0.631
MA0104.2	MA0104.2	0.407
MA0105.1	MA0105.1	3.73709e-8
MA0106.1	MA0106.1	0.93
MA0107.1	MA0107.1	1.06523e-15
MA0108.2	MA0108.2	0.00308
MA0111.1	MA0111.1	0.98
MA0112.2	MA0112.2	0.0352
MA0113.1	MA0113.1	0.377
MA0114.1	MA0114.1	0.143
MA0115.1	MA0115.1	0.78
MA0116.1	MA0116.1	0.0192
MA0117.1	MA0117.1	0.409
MA0119.1	MA0119.1	0.378
MA0122.1	MA0122.1	0.674
MA0124.1	MA0124.1	0.379
MA0125.1	MA0125.1	0.168
MA0131.1	MA0131.1	0.662
MA0135.1	MA0135.1	0.992
MA0136.1	MA0136.1	5.77804e-26
MA0137.2	MA0137.2	5.6304e-5
MA0138.2	MA0138.2	0.0327
MA0139.1	MA0139.1	0.202
MA0140.1	MA0140.1	0.658
MA0141.1	MA0141.1	0.0288
MA0142.1	MA0142.1	8.18793e-6
MA0143.1	MA0143.1	0.149
MA0144.1	MA0144.1	0.0127
MA0145.1	MA0145.1	0.733
MA0146.1	MA0146.1	0.842
MA0147.1	MA0147.1	0.297
MA0148.1	MA0148.1	0.904
MA0149.1	MA0149.1	0.974
MA0150.1	MA0150.1	0.635
MA0152.1	MA0152.1	0.876
MA0153.1	MA0153.1	9.45679e-9
MA0154.1	MA0154.1	2.4715e-4
MA0155.1	MA0155.1	0.575
MA0156.1	MA0156.1	3.96379e-39
MA0157.1	MA0157.1	0.282
MA0159.1	MA0159.1	0.191
MA0160.1	MA0160.1	0.292
MA0162.1	MA0162.1	0.368
MA0163.1	MA0163.1	0.0158
MA0164.1	MA0164.1	0.75
MA0258.1	MA0258.1	0.336
MA0259.1	MA0259.1	0.0531

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10475

Novel motif	Logo	P-value
1	1	0.742
10	10	0.196
100	100	0.441
101	101	0.786
102	102	0.742
103	103	0.242
104	104	0.762
105	105	0.695
106	106	0.128
107	107	0.326
108	108	0.479
109	109	0.479
11	11	0.779
110	110	0.18
111	111	0.564
112	112	0.0263
113	113	0.0185
114	114	0.392
115	115	0.982
116	116	0.594
117	117	0.00968
118	118	0.278
119	119	0.306
12	12	0.558
120	120	0.985
121	121	0.209
122	122	0.659
123	123	0.909
124	124	0.488
125	125	0.189
126	126	0.902
127	127	0.238
128	128	0.131
129	129	0.0518
13	13	0.254
130	130	0.343
131	131	0.699
132	132	0.61
133	133	0.898
134	134	0.686
135	135	0.388
136	136	0.713
137	137	0.13
138	138	0.868
139	139	0.838
14	14	0.408
140	140	0.813
141	141	0.0781
142	142	0.582
143	143	0.0142
144	144	0.775
145	145	0.349
146	146	0.538
147	147	0.618
148	148	0.0915
149	149	0.905
15	15	0.0577
150	150	0.166
151	151	0.0463
152	152	0.565
153	153	0.195
154	154	0.709
155	155	0.555
156	156	0.612
157	157	0.99
158	158	0.222
159	159	0.377
160	160	0.888
161	161	0.0715
162	162	0.0977
163	163	0.332
164	164	0.213
165	165	0.091
166	166	0.68
167	167	0.697
168	168	0.977
169	169	0.0571
17	17	0.664
18	18	0.633
19	19	0.424
2	2	0.904
20	20	0.272
21	21	0.857
22	22	0.567
23	23	0.967
24	24	0.104
25	25	0.196
26	26	0.133
27	27	0.15
28	28	0.0487
29	29	0.334
3	3	0.31
30	30	0.288
31	31	0.804
32	32	0.636
33	33	0.509
34	34	0.566
35	35	0.609
36	36	0.217
37	37	0.0312
38	38	0.077
39	39	0.335
4	4	0.398
40	40	0.6
41	41	0.865
42	42	0.18
43	43	0.174
44	44	0.546
45	45	0.227
46	46	0.285
47	47	0.319
48	48	0.355
49	49	0.333
5	5	0.244
50	50	0.912
51	51	0.986
52	52	0.634
53	53	0.789
54	54	0.409
55	55	0.808
56	56	0.699
57	57	0.457
58	58	0.0392
59	59	0.345
6	6	0.476
60	60	0.59
61	61	0.266
62	62	0.0792
63	63	0.695
64	64	0.694
65	65	0.332
66	66	0.662
67	67	0.504
68	68	0.469
69	69	0.345
7	7	0.196
70	70	0.225
71	71	0.197
72	72	0.146
73	73	0.0952
74	74	0.228
75	75	0.0447
76	76	0.299
77	77	0.297
78	78	0.0168
79	79	0.996
8	8	0.494
80	80	8.67614e-4
81	81	0.59
82	82	0.178
83	83	0.0399
84	84	0.876
85	85	0.746
86	86	0.385
87	87	0.919
88	88	0.396
89	89	0.659
9	9	0.341
90	90	0.216
91	91	0.868
92	92	0.692
93	93	0.168
94	94	0.28
95	95	0.483
96	96	0.988
97	97	0.941
98	98	0.138
99	99	0.336

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10475

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000103 mouse sample
FF:0000998 adult tissue sample
UBERON:0001097 axillary lymph node

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000029 (lymph node)
0000479 (tissue)
0001097 (axillary lymph node)
0000064 (organ part)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003968 (peripheral lymph node)
0010707 (appendage girdle complex)
0002465 (lymphoid system)
0001467 (shoulder)
0010708 (pectoral complex)
0002193 (hemolymphoid system)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005298
+|accession_numbers=CAGE;DRX008926;DRR009800;DRZ001225;DRZ002608;DRZ012575;DRZ013958
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000029,UBERON:0000479,UBERON:0001097,UBERON:0000064,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003968,UBERON:0010707,UBERON:0002465,UBERON:0001467,UBERON:0010708,UBERON:0002193,UBERON:0002405
 |ancestors_in_cell_lineage_facet=
@@ Line 7: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr4:44723559..44723593,-!p1@Pax5!2.55!352.93!Pax5;;chr9:51021788..51021802,+!p1@Pou2af1!2.46!337.14!Pou2af1;;chr1:38721792..38721845,-!p1@Aff3!2.36!281.98!Aff3;;chr7:51787434..51787448,-!p1@Spib!2.33!297.26!Spib;;chr6:99216488..99216534,-!p2@Foxp1!2.26!487.84!Foxp1;;chr4:44723520..44723544,-!p2@Pax5!2.22!165.46!Pax5;;chr3:130815703..130815721,+!p2@Lef1!2.15!168.05!Lef1;;chr4:44723633..44723646,-!p3@Pax5!2.05!112.38!Pax5;;chr11:98407264..98407295,-!p1@Ikzf3!2.03!106.16!Ikzf3;;chr13:30841099..30841116,+!p1@Irf4!2.00!150.96!Irf4;;chr1:52065508..52065522,+!p2@Stat4!1.97!107.72!Stat4;;chr10:88145766..88145770,-!p1@Spic!1.95!113.16!Spic;;chr7:25917492..25917512,-!p1@Pou2f2!1.93!140.09!Pou2f2;;chr11:98407234..98407259,-!p2@Ikzf3!1.93!83.64!Ikzf3;;chrX:7156792..7156811,+!p1@Foxp3!1.91!80.53!Foxp3;;chr1:52065530..52065548,+!p3@Stat4!1.83!67.32!Stat4;;chr11:52096066..52096081,-!p2@Tcf7!1.80!74.57!Tcf7;;chr4:44723835..44723849,-!p4@Pax5!1.72!51.27!Pax5;;chr16:92826249..92826325,-!p1@Runx1!1.71!119.89!Runx1;;chr1:52065454..52065495,+!p1@Stat4!1.70!78.98!Stat4;;chr11:98407370..98407395,-!p3@Ikzf3!1.67!45.83!Ikzf3;;chr11:11586218..11586285,+!p1@Ikzf1!1.62!125.07!Ikzf1;;chr11:23977565..23977612,+!p5@Bcl11a!1.57!77.16!Bcl11a;;chr11:11590140..11590187,+!p3@Ikzf1!1.57!43.50!Ikzf1;;chr14:79915425..79915501,+!p1@Elf1!1.53!280.17!Elf1;;chr2:173044380..173044432,-!p1@Zbp1!1.53!77.16!Zbp1;;chr1:87546583..87546595,+!p1@Sp100!1.52!45.06!Sp100;;chr4:134676555..134676575,+!p2@Runx3!1.51!31.59!Runx3;;chr11:11590117..11590138,+!p4@Ikzf1!1.51!31.07!Ikzf1;;chr1:52176406..52176433,+!p2@Stat1!1.50!73.02!Stat1;;chr4:134708909..134708939,+!p3@Runx3!1.50!30.55!Runx3;;chr18:80904854..80904919,-!p2@Nfatc1!1.49!338.17!Nfatc1;;chr2:91034924..91034946,-!p2@Nr1h3!1.46!34.44!Nr1h3;;chr11:44430812..44430838,+!p1@Ebf1!1.44!247.80!Ebf1;;chr8:123260252..123260264,+!p1@Irf8!1.44!178.93!Irf8;;chr8:47825203..47825225,+!p3@Irf2!1.44!34.96!Irf2;;chr12:37835141..37835194,+!p1@Meox2!1.43!78.20!Meox2;;chr4:134708451..134708469,+!p1@Runx3!1.43!44.54!Runx3;;chr1:87546602..87546617,+!p2@Sp100!1.43!30.30!Sp100;;chr11:98407340..98407359,-!p4@Ikzf3!1.43!26.15!Ikzf3;;chr11:23670953..23671028,-!p1@Rel!1.42!139.05!Rel;;chr12:37835120..37835133,+!p2@Meox2!1.42!35.99!Meox2;;chr4:63064364..63064384,-!p1@Akna!1.41!70.95!Akna;;chr8:47825166..47825178,+!p2@Irf2!1.41!38.32!Irf2;;chr11:5420655..5420659,+!p3@Xbp1!1.41!24.86!Xbp1;;chr1:167865149..167865167,-!p3@Pou2f1!1.40!24.34!Pou2f1;;chr11:16908650..16908690,-!p1@Plek!1.38!137.24!Plek;;chr10:67000609..67000625,+!p1@Egr2!1.36!49.46!Egr2;;chr11:11584970..11585030,+!p2@Ikzf1!1.36!31.07!Ikzf1;;chr13:83663902..83663927,+!p1@Mef2c!1.35!491.46!Mef2c;;chr11:23978022..23978076,+!p1@Bcl11a!1.33!421.55!Bcl11a;;chr11:52096804..52096896,-!p1@Tcf7!1.33!158.99!Tcf7;;chr17:45692676..45692695,+!p2@Nfkbie!1.33!40.91!Nfkbie;;chr6:99216375..99216395,-!p5@Foxp1!1.32!19.94!Foxp1;;chr6:99216360..99216372,-!p8@Foxp1!1.32!19.94!Foxp1;;chr5:134720044..134720103,-!p6@Gtf2i!1.32!19.94!Gtf2i;;chr11:100683839..100683890,-!p2@Stat5b!1.31!44.54!Stat5b;;chr2:173044357..173044377,-!p2@Zbp1!1.31!27.71!Zbp1;;chr17:51971932..51971958,-!p2@Satb1!1.31!26.15!Satb1;;chr2:90936901..90936945,+!p1@Sfpi1!1.29!95.29!Sfpi1;;chr1:52176315..52176343,+!p1@Stat1!1.27!244.44!Stat1;;chr9:32348943..32349001,-!p1@Fli1!1.25!133.61!Fli1;;chr17:45692642..45692663,+!p1@Nfkbie!1.25!52.56!Nfkbie;;chr12:109242266..109242295,-!p1@Bcl11b!1.23!131.54!Bcl11b;;chr8:87225329..87225396,+!p1@Lyl1!1.23!59.30!Lyl1;;chr1:38721767..38721778,-!p5@Aff3!1.23!16.05!Aff3;;chr1:38721779..38721790,-!p6@Aff3!1.23!15.80!Aff3;;chr11:62272010..62272050,-!p2@Ncor1!1.22!49.98!Ncor1;;chr7:20162663..20162678,+!p1@Zfp296!1.22!20.46!Zfp296;;chr7:20408047..20408125,-!p1@Bcl3!1.21!169.60!Bcl3;;chr17:51971960..51971979,-!p1@Satb1!1.21!20.20!Satb1;;chr11:98407305..98407321,-!p6@Ikzf3!1.21!15.28!Ikzf3;;chr1:52176378..52176401,+!p3@Stat1!1.20!44.02!Stat1;;chr11:23670750..23670789,-!p2@Rel!1.20!27.97!Rel;;chr2:90922554..90922575,+!p4@Sfpi1!1.20!26.67!Sfpi1;;chr2:168415815..168415872,-!p1@Nfatc2!1.19!77.94!Nfatc2;;chr11:44430788..44430804,+!p3@Ebf1!1.19!35.73!Ebf1;;chr11:101755669..101755686,-!p1@Meox1!1.18!25.63!Meox1;;chr11:98407142..98407159,-!p5@Ikzf3!1.15!13.21!Ikzf3;;chr18:80909801..80909819,-!p1@Nfatc1!1.12!71.21!Nfatc1;;chr11:23978078..23978096,+!p4@Bcl11a!1.12!37.03!Bcl11a;;chr11:23978111..23978134,+!p3@Bcl11a!1.12!25.38!Bcl11a;;chr13:83663868..83663894,+!p2@Mef2c!1.11!171.42!Mef2c;;chr7:31206743..31206761,+!p1@Nfkbid!1.11!16.31!Nfkbid;;chr7:25917459..25917474,-!p2@Pou2f2!1.11!11.91!Pou2f2;;chr9:32503590..32503680,+!p1@Ets1!1.09!409.64!Ets1;;chr4:6917606..6917681,-!p1@Tox!1.09!47.13!Tox;;chr1:133904901..133904934,+!p3@Elk4!1.08!32.63!Elk4;;chr16:23988711..23988727,-!p1@Bcl6!1.07!127.14!Bcl6;;chr13:42147384..42147441,+!p1@Hivep1!1.07!103.58!Hivep1;;chr11:11585678..11585745,+!p5@Ikzf1!1.07!15.80!Ikzf1;;chr2:90936886..90936898,+!p5@Sfpi1!1.07!12.69!Sfpi1;;chr11:98407164..98407177,-!p8@Ik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5b!0.77!146.56!Arid5b;;chr14:56223010..56223067,+!p1@Irf9!0.77!41.95!Irf9;;chr7:134170660..134170711,-!p6@Maz!0.77!30.30!Maz;;chr3:88753953..88754004,+!p1@Ash1l!0.77!17.61!Ash1l;;chr15:61818593..61818614,+!p4@Myc!0.77!8.80!Myc;;chr17:51971991..51972003,-!p4@Satb1!0.77!4.92!Satb1;;chr8:72676653..72676668,+!p4@2310045N01Rik,p4@Mef2b!0.77!4.92!Mef2b;;chr6:133985839..133985915,+!p1@Etv6!0.76!89.59!Etv6;;chr2:160192793..160192809,-!p1@Mafb!0.76!79.49!Mafb;;chr18:69753015..69753104,+!p1@Tcf4!0.76!69.14!Tcf4;;chr3:95021612..95021650,-!p2@Gabpb2!0.76!26.67!Gabpb2;;chr3:87945895..87945946,+!p2@Mef2d!0.76!16.31!Mef2d;;chr7:88138544..88138584,+!p1@Zfp592!0.75!128.17!Zfp592;;chr2:44968512..44968530,-!p1@Zeb2!0.75!112.64!Zeb2;;chr17:15701286..15701323,-!p1@Prdm9!0.75!19.94!Prdm9;;chr2:166888058..166888105,-!p2@Znfx1!0.75!16.05!Znfx1;;chr11:49016816..49016846,+!p2@Zfp62!0.75!14.50!Zfp62;;chr4:102792072..102792091,+!p5@Mier1!0.75!13.21!Mier1;;chr12:77470718..77470752,-!p4@Zbtb25!0.75!6.73!Zbtb25;;chr11:23670827..23670846,-!p3@Rel!0.75!4.66!Rel;;chr2:168415791..168415802,-!p5@Nfatc2!0.75!4.66!Nfatc2;;chrY:234225..234243,+!p1@Kdm5d,p1@LOC100040412!0.74!38.84!Kdm5d;;chr19:28085676..28085711,-!p2@Rfx3!0.74!30.30!Rfx3;;chr2:165818215..165818226,+!p4@Ncoa3!0.74!9.06!Ncoa3;;chr4:63064395..63064410,-!p2@Akna!0.74!8.29!Akna;;chr1:172797892..172797915,-!p1@Atf6!0.73!136.98!Atf6;;chr19:5637736..5637766,+!p1@Rela!0.73!131.28!Rela;;chr13:67162067..67162114,-!p1@Zfp712!0.73!32.89!Zfp712;;chr17:23004125..23004157,-!p3@Zfp945!0.73!14.76!Zfp945;;chr18:5334765..5334833,-!p2@Zfp438!0.73!12.69!Zfp438;;chr18:36441119..36441158,+!p2@Pura!0.73!11.39!Pura;;chr4:97444557..97444558,+!p23@Nfia!0.73!4.40!Nfia;;chr11:11590205..11590216,+!p9@Ikzf1!0.73!4.40!Ikzf1;;chr11:96838974..96839007,-!p1@Sp2!0.72!73.28!Sp2;;chr12:72116953..72117050,+!p1@Arid4a!0.72!57.48!Arid4a;;chr1:36364590..36364608,+!p1@Arid5a!0.72!48.42!Arid5a;;chr7:20214704..20214800,-!p1@Relb!0.72!15.28!Relb;;chr16:23988686..23988693,-!p2@Bcl6!0.72!9.32!Bcl6;;chr8:86590723..86590781,+!p1@Rfx1!0.71!85.45!Rfx1;;chr12:85559785..85559840,-!p1@C130039O16Rik!0.71!62.40!C130039O16Rik;;chr5:20387850..20387869,-!p1@Phtf2!0.71!47.39!Phtf2;;chrX:131543731..131543764,-!p1@Zmat1!0.71!33.40!Zmat1;;chr6:133985971..133985991,+!p6@Etv6!0.71!12.17!Etv6;;chr17:51972575..51972595,-!p13@Satb1!0.71!4.14!Satb1;;chr11:11590188..11590200,+!p8@Ikzf1!0.71!4.14!Ikzf1;;chr1:64579145..64579168,+!p6@Creb1!0.71!4.14!Creb1;;chr2:166888107..166888224,-!p1@Znfx1!0.70!66.03!Znfx1;;chr19:26681929..26681987,+!p4@Smarca2!0.70!25.63!Smarca2;;chr4:124805092..124805135,-!p2@Zc3h12a!0.70!19.16!Zc3h12a;;chr17:21520689..21520730,+!p1@Zfp677!0.70!15.80!Zfp677;;chr12:72117645..72117677,+!p3@Arid4a!0.70!9.32!Arid4a;;chr9:19426687..19426708,+!p3@Zfp317!0.70!8.03!Zfp317;;chr2:165818125..165818167,+!p1@Ncoa3!0.69!119.37!Ncoa3;;chr1:92949999..92950097,+!p1@Lrrfip1!0.69!118.85!Lrrfip1;;chr17:4994904..4994953,+!p3@Arid1b!0.69!34.18!Arid1b;;chr6:97757008..97757061,+!p1@Mitf!0.69!18.64!Mitf;;chr13:67274092..67274140,+!p1@Rsl1!0.69!15.80!Rsl1;;chr7:87171047..87171078,+!p1@Zfp710!0.69!14.50!Zfp710;;chr18:3281750..3281776,-!p2@Crem!0.69!8.54!Crem;;chr6:52163319..52163342,-!p1@Hoxa3!0.69!5.96!Hoxa3;;chr18:80904923..80904933,-!p3@Nfatc1!0.69!5.44!Nfatc1;;chr6:16848395..16848416,-!p2@Tfec!0.69!4.66!Tfec;;chr19:28086045..28086080,-!p4@Rfx3!0.68!20.46!Rfx3;;chr8:87225670..87225697,+!p2@Lyl1!0.68!12.43!Lyl1;;chr5:142877438..142877486,+!p1@Foxk1!0.67!155.62!Foxk1;;chr5:104183173..104183207,+!p1@Aff1!0.67!55.67!Aff1;;chrX:20639107..20639188,-!p1@Zfp182!0.67!54.38!Zfp182;;chr11:70501419..70501483,-!p1@Camta2,p1@LOC100048818!0.67!44.28!Camta2;;chr1:167932744..167932778,-!p1@Pou2f1!0.67!38.06!Pou2f1;;chr2:48805015..48805042,+!p2@Mbd5!0.67!25.12!Mbd5;;chr10:44178493..44178520,-!p3@Prdm1!0.67!5.44!Prdm1;;chr3:89191004..89191022,-!p4@Zbtb7b!0.67!3.63!Zbtb7b;;chr2:90936867..90936874,+!p7@Sfpi1!0.67!3.63!Sfpi1;;chr12:87027663..87027678,+!p2@Batf!0.67!3.63!Batf;;chr19:46380399..46380417,+!p4@Nfkb2!0.67!3.63!Nfkb2;;chr17:51972400..51972428,-!p11@Satb1!0.67!3.63!Satb1;;chr1:87495371..87495397,-!p1@Sp110!0.67!3.63!Sp110;;chr3:19957802..19957857,+!p1@Hltf!0.66!72.76!Hltf;;chr17:88840082..88840127,+!p1@Foxn2!0.66!29.26!Foxn2;;chr9:19426741..19426775,+!p2@Zfp317!0.66!12.95!Zfp317;;chr19:26681226..26681299,+!p7@Smarca2!0.66!9.32!Smarca2;;chr10:92773708..92773734,-!p3@Elk3!0.66!7.77!Elk3;;chr4:32325445..32325468,+!p4@Bach2!0.66!5.44!Bach2;;chr17:84587279..84587294,-!p1@Zfp36l2!0.65!428.02!Zfp36l2;;chr9:55785900..55785950,-!p1@Scaper!0.65!40.91!Scaper;;chr19:5637528..5637548,+!p2@Rela!0.65!23.82!Rela;;chr11:70501599..70501634,-!p2@Camta2,p2@LOC100048818!0.65!7.77!Camta2;;chr1:165243653..165243664,-!p4@Prrx1!0.65!5.18!Prrx1;;chr4:135736690..135736705,+!p6@E2f2!0.65!4.14!E2f2;;chr6:29476741..29476752,+!p4@Irf5!0.65!3.88!Irf5;;chr9:20297167..20297209,-!p1@Zfp426!0.64!94.25!Zfp426;;chr13:44826694..44826710,+!p3@Jarid2!0.64!42.98!Jarid2;;chr2:163028808..163028869,+!p1@Tox2!0.6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reb1!0.45!1.81!Creb1;;chr2:103143315..103143328,-!p2@Ehf!0.45!1.81!Ehf;;chr2:166885917..166885930,-!p9@Znfx1!0.45!1.81!Znfx1;;chr14:70477013..70477029,+!p4@Egr3!0.45!1.81!Egr3;;chr3:99044284..99044308,+!p4@Tbx15!0.45!1.81!Tbx15;;chr3:130815382..130815401,+!p14@Lef1!0.45!1.81!Lef1;;chr4:135736707..135736724,+!p8@E2f2!0.45!1.81!E2f2;;chr4:63064279..63064293,-!p7@Akna!0.45!1.81!Akna;;chr3:130815455..130815467,+!p10@Lef1!0.45!1.81!Lef1;;chr16:43508231..43508271,+!p21@Zbtb20!0.45!1.81!Zbtb20;;chr6:29479277..29479296,+!p2@Irf5!0.45!1.81!Irf5;;chr15:102301149..102301221,+!p2@Pcbp2!0.44!92.44!Pcbp2;;chr2:73730645..73730673,-!p2@Atf2,p2@LOC100047997!0.44!51.27!Atf2;;chr3:52072329..52072346,+!p1@Foxo1!0.44!38.06!Foxo1;;chr11:80196801..80196806,+!p2@Zfp207!0.44!36.51!Zfp207;;chr11:69393868..69393884,+!p2@Trp53!0.44!34.18!Trp53;;chr15:102455867..102455930,-!p1@Atf7!0.44!31.85!Atf7;;chr10:20032304..20032324,+!p2@Bclaf1!0.44!23.30!Bclaf1;;chr8:118231705..118231722,-!p3@Maf!0.44!19.42!Maf;;chr3:95238432..95238455,+!p2@Arnt!0.44!13.72!Arnt;;chrX:7339938..7339963,+!p1@Tfe3!0.44!12.17!Tfe3;;chr18:84758852..84758878,-!p2@Zfp407!0.44!9.06!Zfp407;;chr6:133985709..133985735,+!p5@Etv6!0.44!6.21!Etv6;;chr6:134780163..134780197,+!p2@Crebl2!0.44!5.18!Crebl2;;chr17:44873393..44873418,-!p4@Runx2!0.44!3.63!Runx2;;chr15:50721560..50721572,-!p10@Trps1!0.44!3.63!Trps1;;chr17:46520492..46520515,+!p4@Zfp318!0.44!2.85!Zfp318;;chr15:102865088..102865107,+!p1@Hoxc4!0.44!2.59!Hoxc4;;chr10:127080031..127080090,+!p1@Stat6!0.43!52.82!Stat6;;chr9:20264394..20264448,-!p1@Zfp26!0.43!44.02!Zfp26;;chr17:48549054..48549091,-!p1@Nfya!0.43!42.72!Nfya;;chr5:76733756..76733815,-!p1@Clock!0.43!37.55!Clock;;chr13:67654035..67654112,-!p1@Zfp748!0.43!35.22!Zfp748;;chr13:65380147..65380174,+!p1@Zfp369!0.43!31.85!Zfp369;;chr18:39650303..39650371,-!p1@Nr3c1!0.43!27.71!Nr3c1;;chr17:48061409..48061431,-!p4@Foxp4!0.43!12.43!Foxp4;;chr10:82226833..82226864,-!p3@Nfyb!0.43!11.91!Nfyb;;chr2:164737060..164737083,-!p1@Zfp335!0.43!11.13!Zfp335;;chr15:103170533..103170556,-!p1@Zfp385a!0.43!8.54!Zfp385a;;chr4:108131994..108132056,+!p2@Zcchc11!0.43!7.51!Zcchc11;;chr13:67830046..67830082,-!p2@Zfp71-rs1!0.43!6.47!Zfp71-rs1;;chr9:55785981..55786009,-!p2@Scaper!0.43!5.96!Scaper;;chr6:115803317..115803361,-!p2@Mbd4!0.43!5.44!Mbd4;;chr10:20880731..20880775,-!p2@Myb!0.43!4.40!Myb;;chr13:5860872..5860883,+!p3@Klf6!0.43!4.14!Klf6;;chr7:71083729..71083742,-!p4@Klf13!0.43!3.63!Klf13;;chr9:19426719..19426729,+!p4@Zfp317!0.43!2.59!Zfp317;;chr4:48057987..48057996,+!p7@Nr4a3!0.43!2.07!Nr4a3;;chr15:76307834..76307891,+!p1@Hsf1!0.42!94.25!Hsf1;;chr10:127896346..127896384,+!p1@Smarcc2!0.42!92.18!Smarcc2;;chr5:139060930..139060975,-!p1@Zfp68!0.42!87.26!Zfp68;;chr3:30993974..30994045,+!p1@Skil!0.42!66.03!Skil;;chr1:64167972..64168026,-!p1@Klf7!0.42!55.93!Klf7;;chr19:41557122..41557178,+!p1@Lcor!0.42!49.98!Lcor;;chr2:75542592..75542609,-!p2@Nfe2l2!0.42!40.14!Nfe2l2;;chr17:21145885..21145977,+!p1@Zfp160!0.42!32.37!Zfp160;;chr4:151363059..151363120,-!p1@Thap3!0.42!28.74!Thap3;;chr3:94758041..94758142,+!p1@Rfx5!0.42!21.23!Rfx5;;chr4:97439116..97439202,+!p5@Nfia!0.42!20.46!Nfia;;chr7:28516392..28516416,+!p2@Zfp60!0.42!17.35!Zfp60;;chrX:103124643..103124660,-!p2@Atrx!0.42!15.54!Atrx;;chr8:118230866..118230891,-!p4@Maf!0.42!15.02!Maf;;chr4:148275237..148275311,+!p2@Casz1!0.42!9.32!Casz1;;chr2:44968721..44968734,-!p6@Zeb2!0.42!8.29!Zeb2;;chr15:57526206..57526241,+!p2@Zhx2!0.42!7.25!Zhx2;;chr7:4947697..4947718,-!p2@Zfp579!0.42!6.47!Zfp579;;chr2:17986419..17986443,+!p3@Mllt10!0.42!5.70!Mllt10;;chr3:152059025..152059046,+!p4@Gm8261,p4@Zzz3!0.42!5.44!Zzz3;;chr17:47278081..47278103,+!p1@Trerf1!0.42!4.92!Trerf1;;chr18:14131045..14131062,-!p3@Zfp521!0.42!3.11!Zfp521;;chr6:88143711..88143717,+!p2@Gata2!0.42!3.11!Gata2;;chr1:181733959..181733977,-!p4@Ahctf1!0.42!2.33!Ahctf1;;chr11:44430877..44430899,+!p6@Ebf1!0.42!2.33!Ebf1;;chr14:56223387..56223401,+!p3@Irf9!0.42!2.07!Irf9;;chr6:52663725..52663794,+!p1@Tax1bp1!0.41!347.75!Tax1bp1;;chr1:15795720..15795756,+!p1@Terf1!0.41!67.58!Terf1;;chr2:18314363..18314465,-!p1@Dnajc1!0.41!57.48!Dnajc1;;chr8:108583462..108583523,+!p1@Nfatc3!0.41!43.24!Nfatc3;;chr15:102236700..102236764,+!p1@Sp1!0.41!34.18!Sp1;;chr5:32438831..32438878,+!p1@Fosl2!0.41!23.56!Fosl2;;chr6:140572167..140572236,+!p2@Aebp2!0.41!23.05!Aebp2;;chr4:97444012..97444045,+!p4@Nfia!0.41!17.09!Nfia;;chr17:45570660..45570694,-!p1@Cdc5l!0.41!15.54!Cdc5l;;chr2:169956656..169956684,-!p1@Zfp217!0.41!15.28!Zfp217;;chr10:30522690..30522752,-!p2@Ncoa7!0.41!13.72!Ncoa7;;chr6:35083731..35083742,-!p2@Cnot4!0.41!5.44!Cnot4;;chr4:87678673..87678706,-!p6@Mllt3!0.41!4.40!Mllt3;;chr17:46520518..46520571,+!p2@Zfp318!0.41!4.40!Zfp318;;chr4:82151583..82151594,-!p6@Nfib!0.41!3.88!Nfib;;chr10:5734525..5734569,-!p3@Esr1!0.41!3.11!Esr1;;chr17:44873258..44873281,-!p5@Runx2!0.41!2.33!Runx2;;chr1:165243638..165243649,-!p5@Prrx1!0.41!2.07!Prrx1;;chr2:163028888..163028905,+!p3@Tox2!0.41!2.07!Tox2;;chr13:59923965..59924003,-!p2@Zcchc6!0.41!2.07!Zcchc6;;chr9:72379740..72379757,+!p7@Rfx7!0.41!1.81!Rfx7;;chr16:92826180..92826191,-!p5@Runx1!0.41!1.55!Runx1;;chr19:37511111..37511115,+!p2@Hhex!0.41!1.55!Hhex;;chr19:37511197..37511206,+!p3@Hhex!0.41!1.55!Hhex;;chr2:163028876..163028885,+!p7@Tox2!0.41!1.55!Tox2;;chr11:23671230..23671264,-!p6@Rel!0.41!1.55!Rel;;chr11:101755710..101755715,-!p2@Meox1!0.41!1.55!Meox1;;chr11:52096260..52096274,-!p12@Tcf7!0.41!1.55!Tcf7;;chr3:89191054..89191070,-!p5@Zbtb7b!0.41!1.55!Zbtb7b;;chr4:102792066..102792069,+!p14@Mier1!0.41!1.55!Mier1;;chr3:130813833..130813848,+!p16@Lef1!0.41!1.55!Lef1;;chr2:74536026..74536039,+!p1@Hoxd9!0.41!1.55!Hoxd9;;chr3:94181355..94181373,+!p5@Rorc!0.41!1.55!Rorc;;chr4:34830168..34830213,-!p1@Zfp292!0.40!85.97!Zfp292;;chr7:29551488..29551529,-!p1@Nfkbib!0.40!72.50!Nfkbib;;chr5:38611720..38611799,+!p1@Lyar!0.40!61.63!Lyar;;chr13:59924433..59924504,-!p1@Zcchc6!0.40!50.23!Zcchc6;;chr5:107125549..107125605,-!p1@Zfp644!0.40!39.36!Zfp644;;chr4:87679232..87679277,-!p1@Mllt3!0.40!26.67!Mllt3;;chr10:30522881..30522960,-!p1@Ncoa7!0.40!26.67!Ncoa7;;chr1:64579364..64579389,+!p2@Creb1!0.40!19.94!Creb1;;chr16:22439654..22439676,-!p2@Etv5!0.40!12.95!Etv5;;chr19:55816414..55816425,+!p4@Tcf7l2!0.40!11.39!Tcf7l2;;chr8:79426176..79426275,+!p1@Nr3c2!0.40!10.88!Nr3c2;;chr8:72519989..72520007,-!p5@Gatad2a!0.40!10.62!Gatad2a;;chr7:28623579..28623631,+!p1@Zfp59!0.40!10.10!Zfp59;;chr7:7124057..7124084,+!p1@Zfp418!0.40!7.25!Zfp418;;chr2:44966659..44966675,-!p7@Zeb2!0.40!5.96!Zeb2;;chr11:53164533..53164548,+!p4@Aff4!0.40!5.96!Aff4;;chr11:95170871..95170900,-!p2@Myst2!0.40!5.44!Myst2;;chr1:172797876..172797887,-!p5@Atf6!0.40!4.40!Atf6;;chr5:104182963..104182982,+!p5@Aff1!0.40!4.14!Aff1;;chrX:45947746..45947762,-!p2@Zfp280c!0.40!4.14!Zfp280c;;chr1:167932722..167932740,-!p2@Pou2f1!0.40!3.11!Pou2f1;;chrX:7339674..7339688,+!p6@Tfe3!0.40!2.85!Tfe3;;chr8:108583683..108583693,+!p3@Nfatc3!0.40!2.59!Nfatc3;;chr2:74549968..74549996,+!p1@Hoxd3!0.40!2.07!Hoxd3;;chr4:48058102..48058110,+!p5@Nr4a3!0.40!1.81!Nr4a3;;chr6:64992569..64992656,+!p1@Smarcad1!0.39!65.25!Smarcad1;;chr2:155299524..155299571,-!p1@Ncoa6!0.39!39.36!Ncoa6;;chr5:46248712..46248750,-!p1@Lcorl!0.39!33.40!Lcorl;;chr7:48888915..48888973,+!p1@Zfp788!0.39!27.71!Zfp788;;chr17:23004085..23004108,-!p1@Zfp945!0.39!21.49!Zfp945;;chr10:114821444..114821491,-!p1@Thap2!0.39!17.35!Thap2;;chr7:30739068..30739108,-!p1@Zfp74!0.39!16.31!Zfp74;;chr13:65380118..65380146,+!p2@Zfp369!0.39!14.50!Zfp369;;chr15:97738692..97738747,-!p1@Vdr!0.39!11.65!Vdr;;chr8:72520162..72520197,-!p4@Gatad2a!0.39!10.88!Gatad2a;;chr11:69579472..69579529,+!p1@Zbtb4!0.39!10.62!Zbtb4;;chr2:169458519..169458555,+!p2@Tshz2!0.39!8.29!Tshz2;;chr7:46773114..46773155,+!p1@Zfp619!0.39!7.77!Zfp619;;chr1:172797920..172797931,-!p3@Atf6!0.39!6.21!Atf6;;chr16:84835570..84835584,+!p4@Gabpa!0.39!6.21!Gabpa;;chr12:77471463..77471495,+!p3@Zbtb1!0.39!5.96!Zbtb1;;chr1:172797934..172797945,-!p4@Atf6!0.39!5.70!Atf6;;chr1:162836606..162836631,+!p2@Rc3h1!0.39!5.44!Rc3h1;;chr17:15701263..15701277,-!p2@Prdm9!0.39!4.66!Prdm9;;chr8:74405624..74405679,+!p3@Zfp709!0.39!3.11!Zfp709;;chr12:100802129..100802145,-!p4@Foxn3!0.39!2.85!Foxn3;;chr11:96145450..96145517,+!p2@Hoxb7!0.39!2.59!Hoxb7;;chr7:19895354..19895369,-!p1@Fosb!0.39!2.33!Fosb;;chr2:75542527..75542590,-!p1@Nfe2l2!0.38!193.94!Nfe2l2;;chr5:138187195..138187255,+!p1@Tsc22d4!0.38!93.74!Tsc22d4;;chr11:5761889..5761969,+!p1@Aebp1!0.38!90.11!Aebp1;;chr13:56804344..56804473,+!p1@Smad5!0.38!65.77!Smad5;;chr14:52899256..52899305,+!p1@Tox4!0.38!55.15!Tox4;;chr11:98798983..98799049,+!p1@Rara!0.38!54.89!Rara;;chr13:23461025..23461086,-!p1@Zfp322a!0.38!51.01!Zfp322a;;chrX:45947560..45947670,-!p1@Zfp280c!0.38!40.65!Zfp280c;;chr2:114027152..114027181,-!p1@Zfp770!0.38!37.80!Zfp770;;chr2:37286355..37286418,-!p1@Zbtb6!0.38!25.12!Zbtb6;;chr10:67599319..67599360,-!p2@Arid5b!0.38!23.30!Arid5b;;chr17:35372700..35372762,-!p1@Nfkbil1!0.38!22.79!Nfkbil1;;chr18:82862265..82862325,-!p1@Zfp236!0.38!20.20!Zfp236;;chr4:136604692..136604722,-!p1@Zbtb40!0.38!20.20!Zbtb40;;chr7:50568603..50568655,-!p1@Zfp715!0.38!12.17!Zfp715;;chr11:69579401..69579427,+!p2@Zbtb4!0.38!7.77!Zbtb4;;chr2:25562263..25562314,+!p2@Bmyc!0.38!7.77!Bmyc;;chr18:79306158..79306249,-!p1@Setbp1!0.38!6.73!Setbp1;;chr2:44965662..44965685,-!p9@Zeb2!0.38!4.40!Zeb2;;chr10:126723307..126723319,-!p6@Mbd6!0.38!2.07!Mbd6;;chr13:83663546..83663560,+!p4@Mef2c!0.38!2.07!Mef2c;;chr6:133985790..133985801,+!p8@Etv6!0.38!2.07!Etv6;;chr12:109241728..109241781,-!p2@Bcl11b!0.38!1.55!Bcl11b;;chr5:125659525..125659599,-!p1@Ncor2!0.37!131.02!Ncor2;;chr18:60720384..60720450,+!p1@Rbm22!0.37!109.01!Rbm22;;chr3:95238308..95238343,+!p1@Arnt!0.37!90.37!Arnt;;chr7:147222284..147222351,+!p1@Zfp511!0.37!48.16!Zfp511;;chr5:25004592..25004630,-!p2@Mll3!0.37!42.21!Mll3;;chr13:44826937..44826952,+!p2@Jarid2!0.37!29.52!Jarid2;;chr7:120351014..120351109,+!p1@Arntl!0.37!28.74!Arntl;;chr10:13685899..13685916,+!p1@Hivep2!0.37!21.75!Hivep2;;chr3:94641350..94641380,+!p1@Pogz!0.37!20.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@@ Line 40: / Line 43: @@
 |is_a=EFO:0002091;;FF:0000103;;FF:0000998;;UBERON:0001097
 |is_obsolete=
+|library_id=CNhs10475
+|library_id_phase_based=2:CNhs10475
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;1063
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;1063
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/accessory%2520axillary%2520lymph%2520node%252c%2520adult.CNhs10475.1063-29H9.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/accessory%2520axillary%2520lymph%2520node%252c%2520adult.CNhs10475.1063-29H9.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/accessory%2520axillary%2520lymph%2520node%252c%2520adult.CNhs10475.1063-29H9.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/accessory%2520axillary%2520lymph%2520node%252c%2520adult.CNhs10475.1063-29H9.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/accessory%2520axillary%2520lymph%2520node%252c%2520adult.CNhs10475.1063-29H9.mm9.nobarcode.rdna.fa.gz
 |name=accessory axillary lymph node, adult
 |namespace=FANTOM5
@@ Line 45: / Line 59: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs10475,LSID646,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
 |repeat_enrich_byfamily=-0.11779559634038,0,0,0.522501738221133,0.449102596679598,0,-0.15148762034472,0,0.0168953083579188,0,0,-0.0843392403965415,0,0,0,0,0,0,-0.191893350882575,0,0,0,0,0,0.181236227563129,0,0,0,0,0,0,0,-0.0359210541028983,0,0,0,0,0,-0.0280864979326967,-0.0155449495595659,-0.147215898969296,-0.984211366477826,0.0908552749243343,0,0,0,0,0,0,0,0,0,0,0.100004302423367,0,0.115230679999689,0,0,0,0,-0.041700398171848,0,0.0500021512116835,0,0.100004302423367,0,0.00113633576128964,-0.129414429776257,-0.0580867403477151,-0.104094974270439,0.100004302423367,0,-0.0452840643355554,0,0,0,-0.0039729210411525,-0.150350287442512,-0.146812284060972,-0.0788315948399074,0,0,0,0,0,0,-0.127580061998599,-0.866541854355388,-0.0654384655974466,0,0,0,0,0
@@ Line 61: / Line 75: @@
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 81: / Line 96: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:1063-29H9;search_select_hide=table117:1063-29H9
 }}

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FF:1063-29H9: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 14:31, 3 June 2020

CNhs10475

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0