FFCP PHASE1:Hg19::chr2:113404212..113404229,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:113404212..113404229,+
|short_description=p9@SLC20A1
|description=CAGE_peak_9_at_SLC20A1_5end
|association_with_transcript=-176bp_to_CU676486,DQ893562,DQ89...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6574 | |EntrezGene=6574 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10946 | |HGNC=10946 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-176bp_to_CU676486,DQ893562,DQ894238_5end | |||
|cluster_id=chr2:113404212..113404229,+ | |||
|description=CAGE_peak_9_at_SLC20A1_5end | |||
|id=chr2:113404212..113404229,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002573;6.01e-16;2!CL:0002379;2.19e-12;1!CL:0000083;3.08e-12;4!CL:0002583;8.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,3.98e-16,2;CL:0000083,2.08e-12,4;CL:0002379,2.46e-12,1;CL:0002583,7.61e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.01e-16;3!DOID:127;6.01e-16;3!DOID:3620;2.19e-12;1!DOID:3565;2.19e-12;1!DOID:1793;3.08e-12;4!DOID:0060072;3.35e-12;4!DOID:170;1.87e-08;6!DOID:4074;4.55e-07;2!DOID:4905;4.55e-07;2!DOID:3498;4.55e-07;2!DOID:4929;8.05e-07;2!DOID:3307;8.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.83e-16,3;DOID:127,7.83e-16,3;DOID:1793,2.08e-12,4;DOID:3620,2.46e-12,1;DOID:3565,2.46e-12,1;DOID:0060072,4.09e-12,4;DOID:170,1.44e-08,6;DOID:4074,4.56e-07,2;DOID:4905,4.56e-07,2;DOID:3498,4.56e-07,2;DOID:4929,5.41e-07,2;DOID:3307,5.73e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;1.16e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,9.87e-11,10 | |||
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| ||
|short_description=p9@SLC20A1 | |||
}} | }} |
Latest revision as of 09:13, 16 September 2015
Short description: | p9@SLC20A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC20A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -176bp_to_CU676486, DQ893562, DQ894238_5end |
EntrezGene: | SLC20A1 |
HGNC: | 10946 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 3.98e-16 | 2 |
epithelial cell of pancreas | 2.08e-12 | 4 |
meningothelial cell | 2.46e-12 | 1 |
subcutaneous preadipocyte | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas | 9.87e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.83e-16 | 3 |
leiomyoma | 7.83e-16 | 3 |
pancreatic cancer | 2.08e-12 | 4 |
central nervous system cancer | 2.46e-12 | 1 |
meningioma | 2.46e-12 | 1 |
benign neoplasm | 4.09e-12 | 4 |
endocrine gland cancer | 1.44e-08 | 6 |
pancreas adenocarcinoma | 4.56e-07 | 2 |
pancreatic carcinoma | 4.56e-07 | 2 |
pancreatic ductal adenocarcinoma | 4.56e-07 | 2 |
tubular adenocarcinoma | 5.41e-07 | 2 |
teratoma | 5.73e-07 | 2 |