FFCP PHASE1:Hg19::chr2:109204909..109204928,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:109204909..109204928,+
|short_description=p3@LIMS1
|description=CAGE_peak_3_at_LIMS1_5end
|association_with_transcript=0bp_to_ENST00000393310,NM_001193488,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3987 | |EntrezGene=3987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6616 | |HGNC=6616 | ||
|TSSclassifier=strong | |||
|UniProt=P48059 | |UniProt=P48059 | ||
|association_with_transcript=0bp_to_ENST00000393310,NM_001193488,uc002teh.2_5end | |||
|cluster_id=chr2:109204909..109204928,+ | |||
|description=CAGE_peak_3_at_LIMS1_5end | |||
|id=chr2:109204909..109204928,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.08e-62!112;CL:0000049!2.08e-62!112;CL:0000037!2.95e-48!172;CL:0000566!2.95e-48!172;CL:0002032!3.28e-47!165;CL:0000837!3.28e-47!165;CL:0000766!3.72e-47!76;CL:0000988!1.62e-43!182;CL:0000557!1.79e-42!71;CL:0000839!4.53e-42!70;CL:0002009!3.97e-38!65;CL:0002194!6.41e-37!63;CL:0000576!6.41e-37!63;CL:0000040!6.41e-37!63;CL:0000559!6.41e-37!63;CL:0002057!3.26e-35!42;CL:0000738!8.16e-34!140;CL:0000860!1.92e-31!45;CL:0002031!5.42e-29!124;CL:0002087!6.11e-25!119;CL:0000134!9.48e-11!358;CL:0002320!9.04e-10!365;CL:0002393!8.02e-08!9;CL:0002397!8.02e-08!9;CL:0000094!1.63e-07!8;CL:0000219!4.61e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.14e-44;33!CL:0002057;3.14e-44;33!CL:0000473;3.20e-42;39!CL:0000234;3.20e-42;39!CL:0000576;1.65e-36;48!CL:0000766;1.39e-34;69!CL:0000763;1.61e-27;100!CL:0000738;2.72e-12;136!CL:0000094;8.74e-12;8!CL:0000988;4.09e-11;177!CL:0002087;6.93e-10;104!CL:0002393;8.05e-09;6!CL:0002397;8.05e-09;6!CL:0000081;4.50e-08;11!CL:0000235;8.02e-08;6!CL:0000097;1.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.57e-95,108;CL:0000049,7.57e-95,108;CL:0000766,3.51e-82,72;CL:0000557,5.54e-74,67;CL:0000839,2.65e-73,66;CL:0002009,2.00e-66,61;CL:0000473,3.07e-66,48;CL:0000234,3.07e-66,48;CL:0000037,1.45e-64,168;CL:0002194,2.44e-64,59;CL:0000576,2.44e-64,59;CL:0000040,2.44e-64,59;CL:0000559,2.44e-64,59;CL:0002032,8.31e-62,161;CL:0000837,8.31e-62,161;CL:0000988,8.66e-60,177;CL:0000860,1.08e-59,42;CL:0002057,1.08e-59,42;CL:0000738,1.50e-46,136;CL:0002031,2.23e-40,120;CL:0002087,4.00e-34,115;CL:0000134,2.47e-18,354;CL:0002320,1.92e-17,361;CL:0000219,2.43e-14,386;CL:0000034,1.90e-12,441;CL:0002393,2.44e-12,9;CL:0002397,2.44e-12,9;CL:0000048,5.26e-12,427;CL:0000094,8.20e-12,8;CL:0000723,1.80e-11,433;CL:0000081,4.30e-08,11;CL:0000235,8.53e-08,6;CL:0000097,1.12e-07,5;CL:0002028,1.12e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;8.70e-43;42!CL:0000049;5.03e-25;108 | |||
|ontology_enrichment_disease=DOID:8692!7.82e-12!31;DOID:1240!1.56e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.27e-10;31!DOID:1036;2.28e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.33e-10,31;DOID:1036,2.07e-08,8;DOID:1240,1.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.08e-45!102;UBERON:0003061!7.08e-45!102;UBERON:0002193!1.23e-41!112;UBERON:0002371!9.08e-37!80;UBERON:0001474!1.58e-33!86;UBERON:0002405!6.01e-30!115;UBERON:0004765!1.14e-25!101;UBERON:0001434!1.14e-25!101;UBERON:0003081!5.85e-18!216;UBERON:0007023!3.34e-17!115;UBERON:0002204!1.24e-11!167;UBERON:0002384!7.79e-09!375;UBERON:0000178!3.00e-08!15;UBERON:0000179!3.00e-08!15;UBERON:0000463!3.00e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-14;15!UBERON:0000179;2.63e-14;15!UBERON:0000463;2.63e-14;15!UBERON:0002390;1.52e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.70e-77,98;UBERON:0003061,9.70e-77,98;UBERON:0002193,3.19e-69,108;UBERON:0002371,3.75e-65,76;UBERON:0001474,4.44e-61,82;UBERON:0002405,6.61e-55,93;UBERON:0004765,8.57e-54,90;UBERON:0001434,2.46e-46,100;UBERON:0003081,6.47e-30,203;UBERON:0002204,3.23e-22,167;UBERON:0002384,8.63e-17,371;UBERON:0000178,2.59e-14,15;UBERON:0000179,2.59e-14,15;UBERON:0000463,2.59e-14,15;UBERON:0000926,1.44e-11,315;UBERON:0004120,1.44e-11,315;UBERON:0006603,1.44e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,14.9478425202584,11.8987113410136,6.50227717927519,0,0,0,0,0,7.92721186204087,11.0799081706375,15.8430113501412,7.59538047505481,2.23915474239924,3.2389366601898,1.54545340580512,25.4446917864238,54.7920118348774,36.8727773005481,41.3723685692119,87.1675922606271,87.3371965924192,33.6600099016916,47.1335700013545,55.1003595640404,116.17929440824,129.096936716765,108.341189275473,44.2369497925121,84.87381266799,88.3163293869183,157.633204571015,246.47349279444,266.6035814582,10.5552416059749,26.9275937789203,14.9178662686443,62.6851955437741,111.774889264155,87.1951148593805,28.8935965045255,44.8475309841373,41.048691649267,29.0591761264017,104.959126256456,86.3942317713614,10.5627643155971,14.0318837976929,8.17668717482666,4.15615935242032,2.10247649978109,2.4108838004562,12.5405607246149,9.54800050555633,8.76787938070243,0,1.09227722252426,0,0.853460445133014,0.400395987036012,9.77079147922622,1.98313461835459,0,1.1384259382189,0.587237189370939,0.382273228125229,14.5388461436928,13.4522055115569,13.9593564930791,0.393419540227666,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.451725357233318,0.511946444617674,0,0.710331756132051,0,1.00803371612366,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,37.972045057598,31.5174824511674,34.1701958533483,0.238490624305342,0,0,0,0.860234595106124,0,0,0.838998872419812,0,0,0.258416759169329,0,0,0,0,0,0,0,0.625098097988558,0.673588117878509,0,0,0,0,17.1314542666882,15.511210565933,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.567160915800105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,2.80483547606892,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0.352226082707465,0,0.462985512576611,0,0,0,3.93947209739836,9.36017060556951,7.58018927672514,0,0,0,0,0,0,100.010637292877,35.2193736052904,3.93923419527467,5.90891809009542,7.19581870530366,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,3.31583314765545,1.74306691720059,5.09862255028491,3.64871341923571,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0.985153801009636,0,0.385029108839245,0,0,0,0.502548796003046,0,12.7331194071021,29.9161459204025,55.1172632869927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7519373583901,6.90285442619574,6.08347079479633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,7.45483580596178,3.66009631434861,0,0,0,0.618246069886334,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.511359764496605,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.55597265731176,1.00187420719394,0,0.632758849437452,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,1.239293992399,0,0,0,1.426684205925,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,161.875787345062,142.222520528482,125.89202836549,77.4253270237814,44.427125493309,126.45229568258,113.406601820004,176.073789137328,0,0,0,0,0,0,0,2.99369057149225,12.4478490586038,13.1237621288807,0.973865820823666,4.21195767170188,0,0.156679895773023,0,11.1732573349058,0.1605880751037,0,0,2.40453741329035,0.614481528616916,0.223676107892416,0.333698283423817,0.586164286206121,0.556812347790485,1.23087398947712,34.0774154879739,5.32915148796512,7.04935025439248,0,1.02555725490326,0.121360521749513,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.197286811273867,88.6087441683677,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.110579259931225,1.18219047581419,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,7.22109179417114,36.8989933818347,8.57263510345287,13.7243774022418,16.9499802845601,1.70778359451767,30.197950006272,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,1.34802265961354,0.802577647298789,0.702793337176017,0,0,0,1.97292201424695,0,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,9.09038104922453,0.90392296312213,0.137041924646751,0,0.253243183823515,0,0,0,0,0,0.343609788497747,0,0,0,0,0.271808412147228,0,0,0.577901179803038,0,2.19048606227189,1.27746588066972,0,0,0.558564802544508,0.229160424011684,0,0,0,1.11585728720936,0.940568614814168,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,2.4747128070665,2.32140586367385,0.485996453264197,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,11.0003977804114,0,0,0.439656701034247,5.30027555648885,1.42211251997706,0.79339561045614,0,0,1.28144895081234,4.24451623769098,0.828478110694391,1.9846640872478,0.790446527591777,0.487170393523584,0,0,0,0,0.327872630709804,0,0,0,0.500763722825999,0.573409195690071,0.776503360757966,1.05563885000352,0,0,0,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| ||
|short_description=p3@LIMS1 | |||
}} | }} |
Latest revision as of 06:21, 16 September 2015
Short description: | p3@LIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIMS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393310, NM_001193488, uc002teh.2_5end |
EntrezGene: | LIMS1 |
HGNC: | 6616 |
UniProt: | P48059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.70e-77 | 98 |
blood island | 9.70e-77 | 98 |
hemolymphoid system | 3.19e-69 | 108 |
bone marrow | 3.75e-65 | 76 |
bone element | 4.44e-61 | 82 |
immune system | 6.61e-55 | 93 |
skeletal element | 8.57e-54 | 90 |
skeletal system | 2.46e-46 | 100 |
lateral plate mesoderm | 6.47e-30 | 203 |
musculoskeletal system | 3.23e-22 | 167 |
connective tissue | 8.63e-17 | 371 |
blood | 2.59e-14 | 15 |
haemolymphatic fluid | 2.59e-14 | 15 |
organism substance | 2.59e-14 | 15 |
mesoderm | 1.44e-11 | 315 |
mesoderm-derived structure | 1.44e-11 | 315 |
presumptive mesoderm | 1.44e-11 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.33e-10 | 31 |
chronic leukemia | 2.07e-08 | 8 |
leukemia | 1.85e-07 | 39 |