FFCP PHASE1:Hg19::chr2:101436564..101436647,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:101436564..101436647,+
|short_description=p1@NPAS2
|description=CAGE_peak_1_at_NPAS2_5end
|association_with_transcript=0bp_to_ENST00000335681,NM_002518,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4862 | |EntrezGene=4862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7895 | |HGNC=7895 | ||
|TSSclassifier=strong | |||
|UniProt=Q99743,A2I2P5 | |UniProt=Q99743,A2I2P5 | ||
|association_with_transcript=0bp_to_ENST00000335681,NM_002518,uc002tap.1_5end | |||
|cluster_id=chr2:101436564..101436647,+ | |||
|description=CAGE_peak_1_at_NPAS2_5end | |||
|id=chr2:101436564..101436647,+ | |||
|ontology_enrichment_celltype=CL:0000220!6.54e-09!246;CL:0002321!1.53e-08!248;CL:0000055!3.41e-08!180;CL:0000183!1.05e-07!59;CL:0000187!1.08e-07!54;CL:0000680!2.80e-07!57;CL:0000056!2.80e-07!57;CL:0000355!2.80e-07!57;CL:0000192!3.21e-07!42;CL:0000514!3.21e-07!42;CL:0000359!3.37e-07!32;CL:0000222!9.45e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.18e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.41e-08,250;CL:0000187,7.53e-08,55;CL:0000680,1.96e-07,58;CL:0000056,1.96e-07,58;CL:0000355,1.96e-07,58;CL:0000192,2.27e-07,43;CL:0000514,2.27e-07,43;CL:0000359,3.12e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.60e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.21e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.15e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;8.01e-09;25!UBERON:0004573;8.65e-09;33!UBERON:0004571;8.65e-09;33!UBERON:0001637;7.21e-08;42!UBERON:0003509;7.21e-08;42!UBERON:0004572;7.21e-08;42!UBERON:0001869;8.32e-08;32!UBERON:0003528;1.13e-07;34!UBERON:0002020;1.13e-07;34!UBERON:0002791;1.56e-07;32!UBERON:0002619;1.86e-07;22!UBERON:0000948;1.98e-07;22!UBERON:0002780;2.32e-07;41!UBERON:0001890;2.32e-07;41!UBERON:0001893;2.55e-07;34!UBERON:0007500;4.19e-07;56!UBERON:0001981;4.19e-07;56!UBERON:0004537;4.19e-07;56!UBERON:0001950;6.68e-07;20!UBERON:0000947;8.46e-07;21!UBERON:0010191;8.46e-07;21 | |||
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| ||
|short_description=p1@NPAS2 | |||
}} | }} |
Latest revision as of 23:22, 15 September 2015
Short description: | p1@NPAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPAS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000335681, NM_002518, uc002tap.1_5end |
EntrezGene: | NPAS2 |
HGNC: | 7895 |
UniProt: | Q99743A2I2P5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.41e-08 | 250 |
muscle cell | 7.53e-08 | 55 |
muscle precursor cell | 1.96e-07 | 58 |
myoblast | 1.96e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.96e-07 | 58 |
smooth muscle cell | 2.27e-07 | 43 |
smooth muscle myoblast | 2.27e-07 | 43 |
vascular associated smooth muscle cell | 3.12e-07 | 32 |
Ontology term | p-value | n |
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