FFCP PHASE1:Hg19::chr2:100759060..100759073,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:100759060..100759073,-
|short_description=p8@AFF3
|description=CAGE_peak_8_at_AFF3_5end
|association_with_transcript=-15bp_to_ENST00000416492_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3899 | |EntrezGene=3899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6473 | |HGNC=6473 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMS1 | |UniProt=C9JMS1 | ||
|association_with_transcript=-15bp_to_ENST00000416492_5end | |||
|cluster_id=chr2:100759060..100759073,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_8_at_AFF3_5end | |||
|id=chr2:100759060..100759073,- | |||
|ontology_enrichment_celltype=CL:0000037!2.54e-30!172;CL:0000566!2.54e-30!172;CL:0000542!2.06e-29!53;CL:0000051!2.06e-29!53;CL:0000838!3.52e-28!52;CL:0000988!1.79e-27!182;CL:0000738!1.16e-26!140;CL:0000945!2.06e-25!24;CL:0000826!2.06e-25!24;CL:0002032!3.38e-24!165;CL:0000837!3.38e-24!165;CL:0000236!4.29e-24!14;CL:0002087!6.59e-22!119;CL:0002031!6.92e-19!124 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.77e-42;13!CL:0000945;9.81e-33;24!CL:0000542;2.81e-16;53!CL:0000784;3.48e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.06e-39,14;CL:0000945,8.88e-33,24;CL:0000826,8.88e-33,24;CL:0000037,2.54e-21,168;CL:0000542,4.02e-20,53;CL:0000051,4.02e-20,53;CL:0000988,1.02e-19,177;CL:0000838,1.56e-18,52;CL:0000738,1.34e-15,136;CL:0002032,2.90e-15,161;CL:0000837,2.90e-15,161;CL:0002087,2.34e-13,115;CL:0000784,3.27e-10,3;CL:0002031,1.98e-09,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.81e-16;53 | |||
|ontology_enrichment_disease=DOID:2531!2.51e-10!51;DOID:0060083!2.51e-10!51;DOID:1240!3.47e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.05e-08;39!DOID:0060058;6.15e-08;10!DOID:2531;7.55e-08;51!DOID:0060083;7.55e-08;51!DOID:8692;1.41e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.69e-15,51;DOID:0060083,2.69e-15,51;DOID:1240,2.16e-10,39;DOID:0060058,5.93e-08,10;DOID:8692,5.94e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.69e-11!15;UBERON:0000179!1.69e-11!15;UBERON:0000463!1.69e-11!15;UBERON:0002390!3.00e-08!102;UBERON:0003061!3.00e-08!102;UBERON:0002193!4.03e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;6.22e-16;32!UBERON:0000178;1.48e-14;15!UBERON:0000179;1.48e-14;15!UBERON:0000463;1.48e-14;15!UBERON:0004177;1.95e-10;5!UBERON:0005057;1.95e-10;5!UBERON:0002193;1.51e-09;42!UBERON:0002370;3.13e-07;2!UBERON:0005058;3.13e-07;2!UBERON:0009113;3.13e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.58e-14,15;UBERON:0000179,1.58e-14,15;UBERON:0000463,1.58e-14,15;UBERON:0004177,2.02e-07,7;UBERON:0005057,2.02e-07,7;UBERON:0002390,2.62e-07,98;UBERON:0003061,2.62e-07,98;UBERON:0002193,4.43e-07,108 | |||
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| ||
|short_description=p8@AFF3 | |||
}} | }} |
Latest revision as of 22:43, 15 September 2015
Short description: | p8@AFF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_AFF3_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -15bp_to_ENST00000416492_5end |
EntrezGene: | AFF3 |
HGNC: | 6473 |
UniProt: | C9JMS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.06e-39 | 14 |
lymphocyte of B lineage | 8.88e-33 | 24 |
pro-B cell | 8.88e-33 | 24 |
hematopoietic stem cell | 2.54e-21 | 168 |
lymphocyte | 4.02e-20 | 53 |
common lymphoid progenitor | 4.02e-20 | 53 |
hematopoietic cell | 1.02e-19 | 177 |
lymphoid lineage restricted progenitor cell | 1.56e-18 | 52 |
leukocyte | 1.34e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.90e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-15 | 161 |
nongranular leukocyte | 2.34e-13 | 115 |
plasmacytoid dendritic cell | 3.27e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 1.98e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.58e-14 | 15 |
haemolymphatic fluid | 1.58e-14 | 15 |
organism substance | 1.58e-14 | 15 |
hemopoietic organ | 2.02e-07 | 7 |
immune organ | 2.02e-07 | 7 |
hematopoietic system | 2.62e-07 | 98 |
blood island | 2.62e-07 | 98 |
hemolymphoid system | 4.43e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.69e-15 | 51 |
immune system cancer | 2.69e-15 | 51 |
leukemia | 2.16e-10 | 39 |
lymphoma | 5.93e-08 | 10 |
myeloid leukemia | 5.94e-08 | 31 |