FFCP PHASE1:Hg19::chr22:50964558..50964614,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:50964558..50964614,-
|short_description=p2@SCO2
|description=CAGE_peak_2_at_SCO2_5end
|association_with_transcript=0bp_to_ENST00000439934,ENST00000535425,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9997 | |EntrezGene=9997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10604 | |HGNC=10604 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBU1,O43819 | |UniProt=C9JBU1,O43819 | ||
|association_with_transcript=0bp_to_ENST00000439934,ENST00000535425,NM_001169110_5end | |||
|cluster_id=chr22:50964558..50964614,- | |||
|description=CAGE_peak_2_at_SCO2_5end | |||
|id=chr22:50964558..50964614,- | |||
|ontology_enrichment_celltype=CL:0000988!1.73e-23!182;CL:0000037!1.31e-22!172;CL:0000566!1.31e-22!172;CL:0000738!2.80e-21!140;CL:0002032!5.53e-20!165;CL:0000837!5.53e-20!165;CL:0002087!8.85e-17!119;CL:0002031!2.74e-16!124;CL:0002320!2.83e-13!365;CL:0000134!4.75e-12!358;CL:0000048!5.51e-12!430;CL:0000034!1.15e-11!444;CL:0000723!1.27e-11!436;CL:0000763!5.62e-11!112;CL:0000049!5.62e-11!112;CL:0000766!1.24e-10!76;CL:0000219!1.52e-10!390;CL:0002371!2.02e-10!591;CL:0000557!8.15e-10!71;CL:0000542!2.21e-09!53;CL:0000051!2.21e-09!53;CL:0000838!6.39e-09!52;CL:0000945!3.28e-08!24;CL:0000826!3.28e-08!24;CL:0002057!3.73e-08!42;CL:0002009!5.19e-08!65;CL:0000839!7.40e-08!70;CL:0000144!1.04e-07!625;CL:0002194!1.12e-07!63;CL:0000576!1.12e-07!63;CL:0000040!1.12e-07!63;CL:0000559!1.12e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.15e-08;24!CL:0000576;5.06e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.06e-26,177;CL:0000037,1.37e-25,168;CL:0000738,1.32e-23,136;CL:0002032,1.05e-22,161;CL:0000837,1.05e-22,161;CL:0002087,3.21e-19,115;CL:0002031,8.49e-19,120;CL:0002320,3.20e-14,361;CL:0000134,6.56e-13,354;CL:0000763,7.17e-13,108;CL:0000049,7.17e-13,108;CL:0000766,4.10e-12,72;CL:0000048,1.39e-11,427;CL:0000557,1.76e-11,67;CL:0000219,2.65e-11,386;CL:0000723,3.30e-11,433;CL:0000034,3.44e-11,441;CL:0000542,6.53e-10,53;CL:0000051,6.53e-10,53;CL:0002009,1.07e-09,61;CL:0000839,1.34e-09,66;CL:0000838,2.03e-09,52;CL:0002194,2.51e-09,59;CL:0000576,2.51e-09,59;CL:0000040,2.51e-09,59;CL:0000559,2.51e-09,59;CL:0000473,8.48e-09,48;CL:0000234,8.48e-09,48;CL:0000945,1.23e-08,24;CL:0000826,1.23e-08,24;CL:0000860,1.91e-08,42;CL:0002057,1.91e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.60e-07,51;DOID:0060083,7.60e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.09e-14!112;UBERON:0002384!6.37e-14!375;UBERON:0002390!1.47e-13!102;UBERON:0003061!1.47e-13!102;UBERON:0002371!6.00e-10!80;UBERON:0001474!4.72e-09!86;UBERON:0002405!1.56e-08!115;UBERON:0003081!4.74e-08!216;UBERON:0004765!1.47e-07!101;UBERON:0001434!1.47e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.52e-16,98;UBERON:0003061,5.52e-16,98;UBERON:0002193,6.42e-16,108;UBERON:0002384,6.44e-15,371;UBERON:0002405,4.58e-13,93;UBERON:0002371,7.61e-12,76;UBERON:0003081,1.71e-11,203;UBERON:0001474,2.82e-10,82;UBERON:0004765,1.09e-09,90;UBERON:0001434,1.94e-09,100 | |||
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| ||
|short_description=p2@SCO2 | |||
}} | }} |
Latest revision as of 20:50, 15 September 2015
Short description: | p2@SCO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439934, ENST00000535425, NM_001169110_5end |
EntrezGene: | SCO2 |
HGNC: | 10604 |
UniProt: | C9JBU1O43819 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.52e-16 | 98 |
blood island | 5.52e-16 | 98 |
hemolymphoid system | 6.42e-16 | 108 |
connective tissue | 6.44e-15 | 371 |
immune system | 4.58e-13 | 93 |
bone marrow | 7.61e-12 | 76 |
lateral plate mesoderm | 1.71e-11 | 203 |
bone element | 2.82e-10 | 82 |
skeletal element | 1.09e-09 | 90 |
skeletal system | 1.94e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.60e-07 | 51 |
immune system cancer | 7.60e-07 | 51 |