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MacroAPE 1083:CNhs12545 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;38.987260067621925;107.19172571068468;33.60385348552125;37.217160736172104!2;38.91641085254373;75.28473605163342;26.13768111410116;76.661171...")
 
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96204!10455-106G5;0.0569308!10534-107G3;0.0122024!10429-106D6;0.0225094!10464-106H5;0.0211343!10827-111C8;0.0371067!10789-110H6;0.012002!10828-111C9;0.00643766!10788-110H5;0.0185032!10792-110H9;0.0161218!10765-110E9;0.0210691!10829-111D1;0.0423592!10830-111D2;0.0352925!10831-111D3;0.234428!10832-111D4;0.00768342!10833-111D5;0.0093005!10764-110E8;0.00576107!10770-110F5;0.0168145!10399-106A3;0.00425335!10400-106A4;0.0225607!10405-106A9;0.012982!10834-111D6;0.0147361!10835-111D7;0.0097354!10836-111D8;0.0500439!10837-111D9;0.211851!10699-109G6;0.106709!10802-111A1;0.0487467!10796-110I4;0.0500646!10010-101C1;0.0277982!10810-111A9;0.022818!10421-106C7;0.116611!10708-109H6;0.0220591!12235-129G3;0.223172!12236-129G4;0.842039!12237-129G5;0.433177!10167-103B5;0.476961!10151-102I7;0.062228!10428-106D5;0.0201974!10795-110I3;0.603188!10805-111A4;0.00625562!10052-101G7;0.177986!10189-103D9;0.0217209!10589-108D4;0.0755269!10425-106D2;0.55377!10427-106D4;0.579829!10702-109G9;0.0104799!10432-106D9;0.165067!10496-107C1;0.117928!10718-109I7;0.118125!10011-101C2;0.00229646!10053-101G8;0.0174769!10686-109F2;0.44203!10084-102B3;0.606529!10012-101C3;0.0105467!10085-102B4;0.0177034!10482-107A5;0.0913726!10419-106C5;0.29982!10080-102A8;0.10745!10760-110E4;0.0210222!10709-109H7;0.118567!10710-109H8;0.129218!10703-109H1;0.0806101!10719-109I8;0.570894!10642-109A3;0.246498!10177-103C6;0.309074!10164-103B2;0.030796!10173-103C2;0.0302734!10166-103B4;0.348958!10083-102B2;0.253087!10188-103D8;0.146719!10552-107I3;0.0220081!10553-107I4;0.00688858!10013-101C4;0.352454!10536-107G5;0.0557694!10618-108G6;0.757885!10423-106C9;0.0563029!10785-110H2;0.0197979!12238-129G6;0.0373402!12239-129G7;0.459657!12240-129G8;0.600798!10416-106C2;0.260281!10801-110I9;0.00575177!10766-110F1;0.0191588!10824-111C5;0.0347047!10825-111C6;0.057805!10826-111C7;0.0853562!10454-106G4;0.0872133!10409-106B4;0.0728525!10638-108I8;0.0324664!10636-108I6;0.115675!10513-107D9;0.0944436!10420-106C6;0.0590526!10082-102B1;0.0738822!10014-101C5;0.0840352!10070-101I7;0.0742124!10452-106G2;0.0711826!10453-106G3;0.0541935!10449-106F8;0.028376!10042-101F6;0.0388144!10069-101I6;0.00210493!10193-103E4;0.0281973!10631-108I1;0.0203667!10438-106E6;0.0124651!10488-107B2;0.168464!10196-103E7;0.0809301!10071-101I8;0.0283088!10071-101I8;0.13217!10041-101F5;0.343667!10451-106G1;0.00896776!10450-106F9;0.0895736!10604-108F1;0.109774!10605-108F2;0.622669!10606-108F3;0.390775!10603-108E9;0.5941!10497-107C2;0.543586!10448-106F7;0.379305!10643-109A4;0.0827399!10426-106D3;0.0327565!10431-106D8;0.0421827!10197-103E8;0.0912474!10443-106F2;0.0349666!10815-111B5;0.0885945!10816-111B6;0.00885142!10817-111B7;0.0101502!10015-101C6;0.00848498!10410-106B5;0.0795989!10054-101G9;0.322397!10758-110E2;0.0208043!10711-109H9;0.613504!10040-101F4;0.0434518!10470-106I2;0.042703!10415-106C1;0.16387!10198-103E9;0.580685!10614-108G2;0.0335059!10612-108F9;0.773286!10549-107H9;0.0912877!10615-108G3;0.116248!10487-107B1;0.169873!10433-106E1;0.0418692!10688-109F4;0.599083!10444-106F3;0.108529!10444-106F3;0.89154!10485-107A8;0.684396!10413-106B8;0.221679!10175-103C4;0.188502!10161-103A8;0.0116466!12131-128D7;0.00322982!10624-108H3;0.297258!10712-109I1;0.709432!10205-103F7;0.015953!10206-103F8;0.00667493!10207-103F9;0.0124292!10050-101G5;0.00430295!10051-101G6;0.0211806!10016-101C7;0.0197616!10046-101G1;0.0113271!10778-110G4;0.00996348!10633-108I3;0.0816993!10818-111B8;0.150865!10819-111B9;0.0318676!10820-111C1;0.031586!10484-107A7;0.0328903!10808-111A7;0.501703!10169-103B7;0.0249634!10153-102I9;0.0379367!13425-144D5;0.00966351!13433-144E4;0.228176!13437-144E8;0.295149!11904-125F5;0.218276!11905-125F6;0.477491!10039-101F3;0.900329!10791-110H8;0.0312855!10017-101C8;0.0434191!10045-101F9;0.111208!10509-107D5;0.0138885!10839-111E2;0.0740449!10692-109F8;0.0251941!10079-102A7;0.166894!10078-102A6;0.0264754!10721-110A1;0.0304623!10569-108B2;0.22927!10570-108B3;0.057205!10571-108B4;0.133246!10647-109A8;0.120802!10752-110D5;0.80411!10782-110G8;0.0610406!10726-110A6;0.0958446!10018-101C9;0.490195!10086-102B5;0.379407!10182-103D2;0.137598!10165-103B3;0.00725126!10499-107C4;0.00700639!10408-106B3;0.221337!10019-101D1;0.483893!10068-101I5;0.0200331!10075-102A3;0.0253044!10077-102A5;0.0269565!10727-110A7;0.294899!10775-110G1;0.012042!10412-106B7;0.00414172!12231-129F8;0.0466365!12232-129F9;0.107896!12233-129G1;0.011021!12234-129G2;0.0273593!10414-106B9;0.0999815!10170-103B8;0.136716!10183-103D3;0.093165!10150-102I6;0.0593564!10174-103C3;0.0178864!10155-103A2;0.0117908!10038-101F2;0.0024272!10838-111E1;0.00359169!10759-110E3;0.182367!10514-107E1;0.228773!10465-106H6;0.107815!10691-109F7;0.202089!10843-111E6;0.649129!10844-111E7;0.189502!11747-123G1;0.33484!11748-123G2;0.718879!11749-123G3;0.202182!11750-123G4;0.310661!11751-123G5;0.191003!11840-124H4;0.155004!11752-123G6;0.312497!11753-123G7;0.251934!11754-123G8;0.117107!11755-123G9;0.497193!11756-123H1;0.645326!11833-124G6;0.630436!11760-123H5;0.0911977!11836-124G9;0.176962!11758-123H3;0.425813!11835-124G8;0.0327262!11762-123H7;0.0670178!11838-124H2;0.0847341!11757-123H2;0.0861282!11759-123H4;0.77765!11761-123H6;0.171271!11842-124H6;0.145191!11837-124H1;0.032971!10568-108B1;0.0436227!13230-141I8;0.880335!13231-141I9;0.348533!10696-109G3;0.303541!10493-107B7;0.148609!10494-107B8;0.141848!10850-111F4;0.201083!10851-111F5;0.0139824!10852-111F6;0.386516!10853-111F7;0.709578!10854-111F8;0.100349!10855-111F9;0.503801!10856-111G1;0.566815!10847-111F1;0.630779!10846-111E9;0.639534!10848-111F2;0.84726!10845-111E8;0.140078!10857-111G2;0.134912!10858-111G3;0.00980359!10156-103A3;0.0856025!11901-125F2;0.0219213!11902-125F3;0.024714!11903-125F4;0.0728665!10689-109F5;0.0783125!10648-109A9;0.475046!10784-110H1;0.136891!10744-110C6;0.146663!10772-110F7;0.0143513!10474-106I6;0.0929996!10600-108E6;0.0110632!10684-109E9;0.277114!12226-129F3;0.0967595!12227-129F4;0.0887025!10508-107D4;0.123678!10539-107G8;0.316811!10607-108F4;0.43136!10555-107I6;0.225095!10774-110F9;0.201178!10637-108I7;0.104311!10663-109C6;0.0971621!10728-110A8;0.033324!10729-110A9;0.22489!10430-106D7;0.127375!10730-110B1;0.0998133!10813-111B3;0.41021!10812-111B2;0.203255!10037-101F1;0.458262!10172-103C1;0.0261402!10163-103B1;0.136376!10076-102A4;0.0120487!10073-102A1;0.0406258!10036-101E9;0.587221!10195-103E6;0.0165153!10277-104E7;0.0327051!10434-106E2;0.0108623!10550-107I1;0.0774927!10545-107H5;0.0868365!10544-107H4;0.0505266!10704-109H2;0.0868282!10510-107D6;0.0415551!10558-107I9;0.804982!10020-101D2;0.41543!10732-110B3;0.0584864!10049-101G4;0.28189!10698-109G5;0.346706!10437-106E5;0.0237499!10417-106C3;0.762049!10035-101E8;0.096345!10171-103B9;0.0340668!10157-103A4;0.0978833!10034-101E7;0.0233752!10072-101I9;0.0272055!10199-103F1;0.647806!10200-103F2;0.121956!10697-109G4;0.0170039!10723-110A3;0.259497!10179-103C8;0.16221!10160-103A7;0.0623527!10180-103C9;0.165707!10162-103A9;0.318632!10021-101D3;0.322989!10840-111E3;0.0824103!10706-109H4;0.0200939!10033-101E6;0.710466!10032-101E5;0.0206241!10490-107B4;0.0197748!10439-106E7;0.290489!10022-101D4;0.167347!10176-103C5;0.0520629!10469-106I1;0.0661342!10067-101I4;0.0569861!10411-106B6;0.0881252!10471-106I3;0.906834!10030-101E3;0.0741155!10475-106I7;0.0106308!10787-110H4;0.121006!10477-106I9;0.0362031!10695-109G2;0.442756!11771-123I7;0.0189082!11772-123I8;0.0972947!11773-123I9;0.270981!10093-102C3;0.839079!10442-106F1;0.136509!10442-106F1;0.0216162!10201-103F3;0.0305595!10639-108I9;0.0346078!11843-124H7;0.661077!11841-124H5;0.460715!10693-109F9;0.300184!10436-106E4;0.181705!10483-107A6;0.00480565!10282-104F3;0.192382!10023-101D5;0.0735839!10066-101I3;0.0141798!10065-101I2;0.0786396!10800-110I8;0.0752879!10610-108F7;0.551044!10841-111E4;0.550107!10541-107H1;0.084153!10842-111E5;0.167542!10562-108A4;0.228495!10024-101D6;0.374454!10064-101I1;0.227282!10609-108F6;0.317525!10048-101G3;0.637475!10781-110G7;0.010603!10181-103D1;0.910603!10159-103A6;0.00620449!10056-101H2;0.00432246!10737-110B8;0.00454291!10025-101D7;0.101673!10044-101F8;0.28666!10424-106D1;0.0710189!10463-106H4;0.00696371!10616-108G4;0.0376144!10486-107A9;0.716086!10062-101H8;0.0433351!10202-103F4;0.039956!10158-103A5;0.0508824!10441-106E9;0.000625844!10031-101E4;0.154633!10063-101H9;0.0104254!10063-101H9;0.490165!11763-123H8;0.0697933!11765-123I1;0.214207!11768-123I4;0.190725!10807-111A6;0.264293!10790-110H7;0.369416!10798-110I6;0.036294!10786-110H3;0.993949!10591-108D6;0.143278!10593-108D8;0.134397!10590-108D5;0.644839!10026-101D8;0.0103209!10096-102C6;0.10926!10168-103B6;0.23229!10154-103A1;0.0296942!10209-103G2;0.00463621!10061-101H7;0.0287957!10027-101D9;0.0557147!10043-101F7;0.0342315!10783-110G9;0.999279!10028-101E1;0.631829!10060-101H6;0.170721!10203-103F5;0.0319929!10059-101H5;0.0557058!10047-101G2;0.0864264!10029-101E2;0.139752!10058-101H4;0.0560377!10418-106C4;0.0340404!10492-107B6;0.269313!10694-109G1;0.0459007!10797-110I5;0.145197!10057-101H3;0.332158!10100-102D1;0.0394615!10055-101H1;0.0539877!10204-103F6;0.12478!10191-103E2;0.00295739!10563-108A5;0.03716
|name=CNhs12545_bl_f2
|name=CNhs12545_bl_f2
|tomtom_result=TFAP2A#MA0003.1;-5;0.000336347;0.160101;0.320202;7;CTTGAGCCCGGG;GCCCGGGGG;+!CRZ1#MA0285.1;-1;0.00181134;0.862198;0.642615;9;CTTGAGCCCGGG;CTAAGCCAC;+!BAS1#MA0278.1;0;0.00202505;0.963923;0.642615;12;CTTGAGCCCGGG;GCACAGCCAGAGTCAAGTCAA;+!PUT3#MA0358.1;-4;0.00410526;1.9541;0.883618;8;CTTGAGCCCGGG;TTCCCGGG;-!PPARG::RXRA#MA0065.2;3;0.00500565;2.38269;0.883618;12;CTTGAGCCCGGG;TGACCTTTGCCCTAC;-!ESR1#MA0112.2;6;0.00556902;2.65085;0.883618;12;CTTGAGCCCGGG;GGGGTCACGGTGACCTGG;-!Zfx#MA0146.1;-2;0.00845033;4.02236;1;10;CTTGAGCCCGGG;GGGGCCGAGGCCTG;+!PLAG1#MA0163.1;4;0.0130361;6.20518;1;10;CTTGAGCCCGGG;CCCCCTTGGGCCCC;-!TBF1#MA0403.1;-4;0.0131877;6.27735;1;8;CTTGAGCCCGGG;AACCCTAA;+!Ar#MA0007.1;10;0.015449;7.35371;1;12;CTTGAGCCCGGG;ATAAGAACACCCTGTACCCGCC;+!Pax5#MA0014.1;-2;0.0191181;9.1002;1;10;CTTGAGCCCGGG;GGAGCACTGAAGCGTAACCG;+!Tcfcp2l1#MA0145.1;4;0.0206518;9.83026;1;10;CTTGAGCCCGGG;CCAGTTCAAACCAG;+!ESR1#MA0112.2;5;0.0209711;9.98224;1;12;CTTGAGCCCGGG;AGGTCAGGGTGACCTGGGCC;-
}}
}}

Latest revision as of 14:33, 7 September 2012

Full Name: CNhs12545_bl_f2

Motif matrix
POACGT
138.987260067621925107.1917257106846833.6038534855212537.217160736172104
238.9164108525437375.2847360516334226.1376811141011676.66117198172172
343.84793153468264424.49931310005399355.5339810074367393.11877435782671
420.98313872666921421.548267890223215141.445319588579133.02327379452847
5132.80468621670326.681117856545917.95296513411917369.56123079263173
62.4640906220276041.9424061585977037211.0008964247031.592606794671691
73.312873239689233204.473600121332543.33829494713715265.875231691841167
84.0723644475868825203.20422932258934.4777844474752875.245621782348587
945.77576504929849119.7884391075342214.3816492805756137.054146562591725
1016.36361344626000450.4341531067252393.7892358830251456.41299756398965
1153.68339635796337517.7474694278106113.1217736198319732.44736059439408
1247.7745208255874533.184247226813625121.6837994459599514.357432501639016

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TFAP2A#MA0003.1-50.0003363470.1601010.3202027CTTGAGCCCGGGGCCCGGGGG+
CRZ1#MA0285.1-10.001811340.8621980.6426159CTTGAGCCCGGGCTAAGCCAC+
BAS1#MA0278.100.002025050.9639230.64261512CTTGAGCCCGGGGCACAGCCAGAGTCAAGTCAA+
PUT3#MA0358.1-40.004105261.95410.8836188CTTGAGCCCGGGTTCCCGGG-
PPARG::RXRA#MA0065.230.005005652.382690.88361812CTTGAGCCCGGGTGACCTTTGCCCTAC-
ESR1#MA0112.260.005569022.650850.88361812CTTGAGCCCGGGGGGGTCACGGTGACCTGG-
Zfx#MA0146.1-20.008450334.02236110CTTGAGCCCGGGGGGGCCGAGGCCTG+
PLAG1#MA0163.140.01303616.20518110CTTGAGCCCGGGCCCCCTTGGGCCCC-
TBF1#MA0403.1-40.01318776.2773518CTTGAGCCCGGGAACCCTAA+
Ar#MA0007.1100.0154497.35371112CTTGAGCCCGGGATAAGAACACCCTGTACCCGCC+
Pax5#MA0014.1-20.01911819.1002110CTTGAGCCCGGGGGAGCACTGAAGCGTAACCG+
Tcfcp2l1#MA0145.140.02065189.83026110CTTGAGCCCGGGCCAGTTCAAACCAG+
ESR1#MA0112.250.02097119.98224112CTTGAGCCCGGGAGGTCAGGGTGACCTGGGCC-
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