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MacroAPE 1083:CNhs13800 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;407.8112423560189;1120.5798565262066;170.55828847316542;419.9607186642061!2;279.69785072308196;34.19781565689114;30.170171761751742;1774.844...")
 
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-128I8;0.0201848!12182-129A4;0.0353517!12183-129A5;0.0743368!12184-129A6;0.0420506!10809-111A8;0.0221564!10597-108E3;0.147044!10717-109I6;0.0637714!10455-106G5;0.141246!10534-107G3;0.0775645!10429-106D6;0.0498623!10464-106H5;0.0156962!10827-111C8;0.016126!10789-110H6;0.188988!10828-111C9;0.160357!10788-110H5;0.103834!10792-110H9;0.0937688!10765-110E9;0.128145!10829-111D1;0.0752432!10830-111D2;0.212988!10831-111D3;0.0206195!10832-111D4;0.0807304!10833-111D5;0.107929!10764-110E8;0.088095!10770-110F5;0.0199401!10399-106A3;0.0576495!10400-106A4;0.0684513!10405-106A9;0.0668351!10834-111D6;0.0747209!10835-111D7;0.210579!10836-111D8;0.0163513!10837-111D9;0.0367146!10699-109G6;0.0481401!10802-111A1;0.0798073!10796-110I4;0.0238501!10010-101C1;0.39687!10810-111A9;0.0423571!10421-106C7;0.100708!10708-109H6;0.0176752!12235-129G3;0.190852!12236-129G4;0.187647!12237-129G5;0.434443!10167-103B5;0.385981!10151-102I7;0.393345!10428-106D5;0.322461!10795-110I3;0.81775!10805-111A4;0.0518325!10052-101G7;0.107994!10189-103D9;0.0151422!10589-108D4;0.0296727!10425-106D2;0.222048!10427-106D4;0.264638!10702-109G9;0.0610495!10432-106D9;0.00671823!10496-107C1;0.259499!10718-109I7;0.917188!10011-101C2;0.169186!10053-101G8;0.0242418!10686-109F2;0.0214985!10084-102B3;0.00587896!10012-101C3;0.314853!10085-102B4;0.308683!10482-107A5;0.533827!10419-106C5;0.0661535!10080-102A8;0.239625!10760-110E4;0.0947465!10709-109H7;0.321373!10710-109H8;0.346533!10703-109H1;0.203935!10719-109I8;0.048493!10642-109A3;0.164885!10177-103C6;0.0799831!10164-103B2;0.356665!10173-103C2;0.411769!10166-103B4;0.795485!10083-102B2;0.68095!10188-103D8;0.792544!10552-107I3;0.290583!10553-107I4;0.316582!10013-101C4;0.653769!10536-107G5;0.00535074!10618-108G6;0.758875!10423-106C9;0.0192768!10785-110H2;0.119694!12238-129G6;0.0371865!12239-129G7;0.054267!12240-129G8;0.0711158!10416-106C2;0.121668!10801-110I9;0.0724276!10766-110F1;0.129229!10824-111C5;0.0742193!10825-111C6;0.0600691!10826-111C7;0.0597492!10454-106G4;0.0623972!10409-106B4;0.101829!10638-108I8;0.0436635!10636-108I6;0.13956!10513-107D9;0.501507!10420-106C6;0.125262!10082-102B1;0.176872!10014-101C5;0.00873787!10070-101I7;0.00760621!10452-106G2;0.0472451!10453-106G3;0.0131775!10449-106F8;0.0147206!10042-101F6;0.0168075!10069-101I6;0.155176!10193-103E4;0.0268986!10631-108I1;0.323541!10438-106E6;0.105842!10488-107B2;0.127745!10196-103E7;0.132989!10071-101I8;0.00140609!10071-101I8;0.0155275!10041-101F5;0.585824!10451-106G1;0.0385565!10450-106F9;0.0115955!10604-108F1;0.0483825!10605-108F2;0.069681!10606-108F3;0.225495!10603-108E9;0.0813533!10497-107C2;0.125873!10448-106F7;0.297337!10643-109A4;0.7695!10426-106D3;0.483199!10431-106D8;0.449546!10197-103E8;0.208825!10443-106F2;0.0127035!10815-111B5;0.278925!10816-111B6;0.252415!10817-111B7;0.201922!10015-101C6;0.231071!10410-106B5;0.00548284!10054-101G9;0.107715!10758-110E2;0.0775757!10711-109H9;0.189576!10040-101F4;0.239484!10470-106I2;0.367923!10415-106C1;0.281269!10198-103E9;0.75841!10614-108G2;0.011002!10612-108F9;0.223785!10549-107H9;0.314088!10615-108G3;0.240948!10487-107B1;0.115601!10433-106E1;0.245999!10688-109F4;0.172843!10444-106F3;0.222477!10444-106F3;0.872908!10485-107A8;0.811402!10413-106B8;0.847384!10175-103C4;0.566753!10161-103A8;0.316501!12131-128D7;0.214985!10624-108H3;0.0469852!10712-109I1;0.0356355!10205-103F7;0.00826132!10206-103F8;0.0111244!10207-103F9;0.0298134!10050-101G5;0.0448604!10051-101G6;0.0107929!10016-101C7;0.022075!10046-101G1;0.0144475!10778-110G4;0.0397465!10633-108I3;0.00470513!10818-111B8;0.0842996!10819-111B9;0.382825!10820-111C1;0.390516!10484-107A7;0.43346!10808-111A7;0.630669!10169-103B7;0.173488!10153-102I9;0.429037!13425-144D5;0.285989!13433-144E4;0.0039073!13437-144E8;0.0024235!11904-125F5;0.00352034!11905-125F6;0.104124!10039-101F3;0.155784!10791-110H8;0.327494!10017-101C8;0.690898!10045-101F9;0.113207!10509-107D5;0.225511!10839-111E2;0.274085!10692-109F8;0.162402!10079-102A7;0.0981533!10078-102A6;0.0139419!10721-110A1;0.0239337!10569-108B2;0.342024!10570-108B3;0.0308792!10571-108B4;0.00346989!10647-109A8;0.0167413!10752-110D5;0.2056!10782-110G8;0.0546459!10726-110A6;0.0421296!10018-101C9;0.309071!10086-102B5;0.0746196!10182-103D2;0.259773!10165-103B3;0.372183!10499-107C4;0.329765!10408-106B3;0.596483!10019-101D1;0.228581!10068-101I5;0.074767!10075-102A3;0.0854771!10077-102A5;0.0678516!10727-110A7;0.304833!10775-110G1;0.0956354!10412-106B7;0.0859796!12231-129F8;0.846806!12232-129F9;0.10104!12233-129G1;0.0307736!12234-129G2;0.130389!10414-106B9;0.183147!10170-103B8;0.155175!10183-103D3;0.505065!10150-102I6;0.399148!10174-103C3;0.326288!10155-103A2;0.129788!10038-101F2;0.175724!10838-111E1;0.19906!10759-110E3;0.0269183!10514-107E1;0.245251!10465-106H6;0.0318201!10691-109F7;0.275069!10843-111E6;0.245003!10844-111E7;0.0291217!11747-123G1;0.0337111!11748-123G2;0.0141566!11749-123G3;0.0272433!11750-123G4;0.0320198!11751-123G5;5.78259e-05!11840-124H4;0.000679381!11752-123G6;0.00105709!11753-123G7;0.0527431!11754-123G8;0.0174811!11755-123G9;0.00283882!11756-123H1;0.165743!11833-124G6;0.0858187!11760-123H5;0.224648!11836-124G9;0.101706!11758-123H3;0.000241255!11835-124G8;0.0227036!11762-123H7;0.0240212!11838-124H2;0.142685!11757-123H2;0.0476428!11759-123H4;0.0244617!11761-123H6;0.0143247!11842-124H6;0.132719!11837-124H1;0.0216211!10568-108B1;0.014718!13230-141I8;0.146973!13231-141I9;0.0149747!10696-109G3;0.0119326!10493-107B7;0.0033638!10494-107B8;0.333954!10850-111F4;0.291834!10851-111F5;0.0646603!10852-111F6;0.952823!10853-111F7;0.983913!10854-111F8;0.13391!10855-111F9;0.762684!10856-111G1;0.792153!10847-111F1;0.463913!10846-111E9;0.617645!10848-111F2;0.357252!10845-111E8;0.340651!10857-111G2;0.064439!10858-111G3;0.445524!10156-103A3;0.640368!11901-125F2;0.311281!11902-125F3;0.000941879!11903-125F4;0.00066565!10689-109F5;0.00100022!10648-109A9;0.681481!10784-110H1;0.503557!10744-110C6;0.282425!10772-110F7;0.00116749!10474-106I6;0.100464!10600-108E6;0.136222!10684-109E9;0.893977!12226-129F3;0.693504!12227-129F4;0.646723!10508-107D4;0.314615!10539-107G8;0.0456555!10607-108F4;0.262202!10555-107I6;0.0399268!10774-110F9;0.0541774!10637-108I7;0.277759!10663-109C6;0.30774!10728-110A8;0.102865!10729-110A9;0.101112!10430-106D7;0.0264912!10730-110B1;0.0356085!10813-111B3;0.155766!10812-111B2;0.0122833!10037-101F1;0.142052!10172-103C1;0.307146!10163-103B1;0.383956!10076-102A4;0.299811!10073-102A1;0.382179!10036-101E9;0.605282!10195-103E6;0.390393!10277-104E7;0.332051!10434-106E2;0.24129!10550-107I1;0.152422!10545-107H5;0.180314!10544-107H4;0.538064!10704-109H2;0.144293!10510-107D6;0.156362!10558-107I9;0.107393!10020-101D2;0.751714!10732-110B3;0.0142774!10049-101G4;0.256245!10698-109G5;0.246143!10437-106E5;0.119541!10417-106C3;0.816809!10035-101E8;0.783925!10171-103B9;0.369009!10157-103A4;0.469172!10034-101E7;0.349621!10072-101I9;0.361787!10199-103F1;0.608245!10200-103F2;0.000285754!10697-109G4;0.00792095!10723-110A3;0.192946!10179-103C8;0.978794!10160-103A7;0.527937!10180-103C9;0.518015!10162-103A9;0.389423!10021-101D3;0.173139!10840-111E3;0.165834!10706-109H4;0.0110879!10033-101E6;0.197215!10032-101E5;0.384178!10490-107B4;0.366537!10439-106E7;0.268992!10022-101D4;0.0861913!10176-103C5;0.00949476!10469-106I1;0.454783!10067-101I4;0.172163!10411-106B6;0.0497118!10471-106I3;0.822733!10030-101E3;0.344779!10475-106I7;0.160677!10787-110H4;0.0338384!10477-106I9;0.125488!10695-109G2;0.199545!11771-123I7;0.0982398!11772-123I8;0.325489!11773-123I9;0.9031!10093-102C3;0.265429!10442-106F1;0.00242895!10442-106F1;0.171541!10201-103F3;0.133914!10639-108I9;0.0018304!11843-124H7;0.95263!11841-124H5;0.152847!10693-109F9;0.487493!10436-106E4;0.0258257!10483-107A6;0.47485!10282-104F3;0.367898!10023-101D5;0.0702523!10066-101I3;0.0453193!10065-101I2;0.0572404!10800-110I8;0.0110547!10610-108F7;0.0179493!10841-111E4;0.250587!10541-107H1;0.0716838!10842-111E5;0.0568494!10562-108A4;0.00651277!10024-101D6;0.0363723!10064-101I1;0.0072074!10609-108F6;0.00919486!10048-101G3;0.282768!10781-110G7;0.00432689!10181-103D1;0.0541626!10159-103A6;0.216652!10056-101H2;0.162828!10737-110B8;0.116325!10025-101D7;0.0064006!10044-101F8;0.362734!10424-106D1;0.284736!10463-106H4;0.0217267!10616-108G4;0.326052!10486-107A9;0.443918!10062-101H8;0.24638!10202-103F4;0.0593714!10158-103A5;0.00207072!10441-106E9;0.136472!10031-101E4;0.0208806!10063-101H9;0.338559!10063-101H9;0.758795!11763-123H8;0.0315066!11765-123I1;0.00313966!11768-123I4;0.00344917!10807-111A6;0.000519116!10790-110H7;0.0675772!10798-110I6;0.0211266!10786-110H3;0.0384098!10591-108D6;0.0333689!10593-108D8;0.0148525!10590-108D5;0.016647!10026-101D8;0.0262375!10096-102C6;0.00916986!10168-103B6;0.370744!10154-103A1;0.3759!10209-103G2;0.198381!10061-101H7;0.00600914!10027-101D9;0.02175!10043-101F7;0.0043429!10783-110G9;0.777365!10028-101E1;0.974431!10060-101H6;0.00959016!10203-103F5;0.0253856!10059-101H5;0.00733727!10047-101G2;0.00698669!10029-101E2;0.010086!10058-101H4;0.00230543!10418-106C4;0.00671382!10492-107B6;0.332151!10694-109G1;0.298643!10797-110I5;0.649726!10057-101H3;0.056082!10100-102D1;0.0128339!10055-101H1;0.0149153!10204-103F6;0.0122063!10191-103E2;0.0423917!10563-108A5;0.0443361
|name=CNhs13800_bu_f2
|name=CNhs13800_bu_f2
|tomtom_result=NFIC#MA0161.1;-1;0.00142013;0.675981;1;6;CTGCCAGC;TGCCAA;-!CTCF#MA0139.1;0;0.00355323;1.69134;1;8;CTGCCAGC;TGGCCACCAGGGGGCGCTA;+!Hand1::Tcfe2a#MA0092.1;0;0.00366761;1.74578;1;8;CTGCCAGC;ATGCCAGACC;-!GCR1#MA0304.1;2;0.01087;5.17412;1;6;CTGCCAGC;GGCTTCCA;-!vis#MA0252.1;-1;0.0127698;6.07843;1;6;CTGCCAGC;TGACAG;+!ACE2#MA0267.1;-2;0.012853;6.11804;1;6;CTGCCAGC;ACCAGCA;+!Stat3#MA0144.1;-1;0.0139347;6.6329;1;7;CTGCCAGC;TTCCAGGAAG;+!ELK1#MA0028.1;0;0.0146414;6.96931;1;8;CTGCCAGC;CTTCCGGCTC;-!TLX1::NFIC#MA0119.1;8;0.0151402;7.20674;1;6;CTGCCAGC;TTGGCATGGTGCCA;-!Mafb#MA0117.1;0;0.0154805;7.36871;1;8;CTGCCAGC;GCGTCAGC;-!achi#MA0207.1;0;0.0158895;7.56342;1;6;CTGCCAGC;CTGTCA;-!RPN4#MA0373.1;-1;0.0165295;7.86805;1;7;CTGCCAGC;CGCCACC;-!YY1#MA0095.1;-2;0.0167724;7.98369;1;6;CTGCCAGC;GCCATC;+!hth#MA0227.1;0;0.0197055;9.37983;1;6;CTGCCAGC;CTGTCA;-!Eip74EF#MA0026.1;0;0.0201394;9.58637;1;7;CTGCCAGC;CTTCCGG;-!SWI5#MA0402.1;-1;0.0206927;9.84975;1;7;CTGCCAGC;AACCAGCA;-
}}
}}

Latest revision as of 14:33, 7 September 2012

Full Name: CNhs13800_bu_f2

Motif matrix
POACGT
1407.81124235601891120.5798565262066170.55828847316542419.9607186642061
2279.6978507230819634.1978156568911430.1701717617517421774.8442678778724
314.87807275679613891.931907018028331321.056639910536691.0434863342383
40.02118.9101060195960.00.0
50.02118.9101060195960.00.0
62107.22182279784373.8960944072505483.8960944072505483.896094407250548
7162.78360328599047538.94823448732341191.1239262451973226.05434200108533
899.773756591346631188.5424039083416415.3899207029484415.2040248169625

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFIC#MA0161.1-10.001420130.67598116CTGCCAGCTGCCAA-
CTCF#MA0139.100.003553231.6913418CTGCCAGCTGGCCACCAGGGGGCGCTA+
Hand1::Tcfe2a#MA0092.100.003667611.7457818CTGCCAGCATGCCAGACC-
GCR1#MA0304.120.010875.1741216CTGCCAGCGGCTTCCA-
vis#MA0252.1-10.01276986.0784316CTGCCAGCTGACAG+
ACE2#MA0267.1-20.0128536.1180416CTGCCAGCACCAGCA+
Stat3#MA0144.1-10.01393476.632917CTGCCAGCTTCCAGGAAG+
ELK1#MA0028.100.01464146.9693118CTGCCAGCCTTCCGGCTC-
TLX1::NFIC#MA0119.180.01514027.2067416CTGCCAGCTTGGCATGGTGCCA-
Mafb#MA0117.100.01548057.3687118CTGCCAGCGCGTCAGC-
achi#MA0207.100.01588957.5634216CTGCCAGCCTGTCA-
RPN4#MA0373.1-10.01652957.8680517CTGCCAGCCGCCACC-
YY1#MA0095.1-20.01677247.9836916CTGCCAGCGCCATC+
hth#MA0227.100.01970559.3798316CTGCCAGCCTGTCA-
Eip74EF#MA0026.100.02013949.5863717CTGCCAGCCTTCCGG-
SWI5#MA0402.1-10.02069279.8497517CTGCCAGCAACCAGCA-
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