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MacroAPE 1083:CNhs12530 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;155.824194035477;160.14990079278974;72.51329411758108;50.866557890615184!2;108.21745175706613;179.63058832711928;41.25201431127922;110.25389...")
 
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9-106D6;0.056574!10464-106H5;0.0638276!10827-111C8;0.0831003!10789-110H6;0.773875!10828-111C9;0.689632!10788-110H5;0.924218!10792-110H9;0.35282!10765-110E9;0.936501!10829-111D1;0.278448!10830-111D2;0.597344!10831-111D3;0.224627!10832-111D4;0.430609!10833-111D5;0.700399!10764-110E8;0.432304!10770-110F5;0.0590113!10399-106A3;0.305153!10400-106A4;0.219905!10405-106A9;0.178446!10834-111D6;0.231006!10835-111D7;0.606886!10836-111D8;0.172209!10837-111D9;0.410234!10699-109G6;0.553651!10802-111A1;0.425794!10796-110I4;0.235955!10010-101C1;0.429372!10810-111A9;0.00587413!10421-106C7;0.0463447!10708-109H6;0.672112!12235-129G3;0.0426369!12236-129G4;0.229156!12237-129G5;0.518047!10167-103B5;0.549807!10151-102I7;0.356012!10428-106D5;0.411292!10795-110I3;0.0151782!10805-111A4;0.107774!10052-101G7;0.0952988!10189-103D9;0.02571!10589-108D4;0.0455068!10425-106D2;0.0889278!10427-106D4;0.0387847!10702-109G9;0.087277!10432-106D9;0.190788!10496-107C1;0.17695!10718-109I7;0.141875!10011-101C2;0.467044!10053-101G8;0.0284014!10686-109F2;0.119087!10084-102B3;0.615569!10012-101C3;0.653498!10085-102B4;0.504353!10482-107A5;0.188232!10419-106C5;0.199503!10080-102A8;0.299769!10760-110E4;0.0610174!10709-109H7;0.193427!10710-109H8;0.0451446!10703-109H1;0.3324!10719-109I8;0.0187028!10642-109A3;0.0197697!10177-103C6;0.0560171!10164-103B2;0.484973!10173-103C2;0.383207!10166-103B4;0.167725!10083-102B2;0.231205!10188-103D8;0.283543!10552-107I3;0.582257!10553-107I4;0.188663!10013-101C4;0.226193!10536-107G5;0.0382106!10618-108G6;0.0761781!10423-106C9;0.193957!10785-110H2;0.500299!12238-129G6;0.649944!12239-129G7;0.00530852!12240-129G8;0.0349714!10416-106C2;0.00118439!10801-110I9;0.400818!10766-110F1;0.612609!10824-111C5;0.728238!10825-111C6;0.0821795!10826-111C7;0.0826112!10454-106G4;0.0997502!10409-106B4;0.152557!10638-108I8;0.712147!10636-108I6;0.139162!10513-107D9;0.381474!10420-106C6;0.164647!10082-102B1;0.0518122!10014-101C5;0.00596263!10070-101I7;0.0103341!10452-106G2;0.0552617!10453-106G3;0.102421!10449-106F8;0.10107!10042-101F6;0.0999554!10069-101I6;0.961296!10193-103E4;0.00827748!10631-108I1;0.535259!10438-106E6;0.121166!10488-107B2;0.450636!10196-103E7;0.455409!10071-101I8;0.0857422!10071-101I8;0.0122139!10041-101F5;0.113187!10451-106G1;0.201554!10450-106F9;0.183355!10604-108F1;0.16442!10605-108F2;0.194821!10606-108F3;0.273381!10603-108E9;0.127272!10497-107C2;0.161147!10448-106F7;0.707498!10643-109A4;0.165514!10426-106D3;0.982012!10431-106D8;0.393083!10197-103E8;0.0941364!10443-106F2;0.0150906!10815-111B5;0.0303428!10816-111B6;0.391221!10817-111B7;0.206875!10015-101C6;0.322391!10410-106B5;0.00449254!10054-101G9;0.0225923!10758-110E2;0.162591!10711-109H9;0.0409082!10040-101F4;0.00296882!10470-106I2;0.32062!10415-106C1;0.249528!10198-103E9;0.0719626!10614-108G2;0.00659116!10612-108F9;0.449388!10549-107H9;0.324516!10615-108G3;0.0166424!10487-107B1;0.0394068!10433-106E1;0.373747!10688-109F4;0.365965!10444-106F3;0.728881!10444-106F3;0.134467!10485-107A8;0.166288!10413-106B8;0.0185508!10175-103C4;0.0115847!10161-103A8;0.47467!12131-128D7;0.752082!10624-108H3;0.200334!10712-109I1;0.25909!10205-103F7;0.491513!10206-103F8;0.0466051!10207-103F9;0.0199108!10050-101G5;0.00366635!10051-101G6;0.00268908!10016-101C7;0.00478401!10046-101G1;0.0014733!10778-110G4;0.0328177!10633-108I3;0.424003!10818-111B8;0.326033!10819-111B9;0.374844!10820-111C1;0.340276!10484-107A7;0.342701!10808-111A7;0.170536!10169-103B7;0.282207!10153-102I9;0.347974!13425-144D5;0.518621!13433-144E4;0.0589772!13437-144E8;0.0566004!11904-125F5;0.0432371!11905-125F6;0.740443!10039-101F3;0.961451!10791-110H8;0.406855!10017-101C8;0.363376!10045-101F9;0.00166112!10509-107D5;0.0363686!10839-111E2;0.185477!10692-109F8;0.103354!10079-102A7;0.146915!10078-102A6;0.0291045!10721-110A1;0.00199361!10569-108B2;0.280415!10570-108B3;0.120914!10571-108B4;0.3118!10647-109A8;0.414236!10752-110D5;0.116572!10782-110G8;0.421297!10726-110A6;0.617323!10018-101C9;0.401476!10086-102B5;0.0363487!10182-103D2;0.0036053!10165-103B3;0.669545!10499-107C4;0.62787!10408-106B3;0.120799!10019-101D1;0.71691!10068-101I5;0.00671554!10075-102A3;0.0112335!10077-102A5;0.00614347!10727-110A7;0.038457!10775-110G1;0.189964!10412-106B7;0.180385!12231-129F8;0.224342!12232-129F9;0.399553!12233-129G1;0.0792493!12234-129G2;0.172854!10414-106B9;0.406962!10170-103B8;0.0246918!10183-103D3;0.326433!10150-102I6;0.374121!10174-103C3;0.350933!10155-103A2;0.964114!10038-101F2;0.915827!10838-111E1;0.883089!10759-110E3;0.0830121!10514-107E1;0.100819!10465-106H6;0.0431435!10691-109F7;0.0612573!10843-111E6;0.163129!10844-111E7;0.0176926!11747-123G1;0.0410023!11748-123G2;0.887351!11749-123G3;0.759438!11750-123G4;0.428753!11751-123G5;0.481919!11840-124H4;0.365721!11752-123G6;0.379605!11753-123G7;0.671521!11754-123G8;0.358617!11755-123G9;0.662159!11756-123H1;0.633553!11833-124G6;0.449713!11760-123H5;0.620713!11836-124G9;0.624467!11758-123H3;0.688571!11835-124G8;0.308153!11762-123H7;0.306116!11838-124H2;0.584432!11757-123H2;0.345353!11759-123H4;0.856913!11761-123H6;0.895104!11842-124H6;0.875064!11837-124H1;0.990089!10568-108B1;0.580097!13230-141I8;0.30207!13231-141I9;0.363762!10696-109G3;0.316245!10493-107B7;0.487094!10494-107B8;0.0544377!10850-111F4;0.355416!10851-111F5;0.558046!10852-111F6;0.755095!10853-111F7;0.345279!10854-111F8;0.401136!10855-111F9;0.278304!10856-111G1;0.210713!10847-111F1;0.629113!10846-111E9;0.384132!10848-111F2;0.339972!10845-111E8;0.231523!10857-111G2;0.304618!10858-111G3;0.872769!10156-103A3;0.315034!11901-125F2;0.391858!11902-125F3;0.765123!11903-125F4;0.959978!10689-109F5;0.991036!10648-109A9;0.759363!10784-110H1;0.0748235!10744-110C6;0.13118!10772-110F7;0.516184!10474-106I6;0.278192!10600-108E6;0.245502!10684-109E9;0.401012!12226-129F3;0.00072728!12227-129F4;0.841426!10508-107D4;0.687056!10539-107G8;0.0494497!10607-108F4;0.214425!10555-107I6;0.0430935!10774-110F9;0.078803!10637-108I7;0.109578!10663-109C6;0.0258175!10728-110A8;0.0269674!10729-110A9;0.0770603!10430-106D7;0.0756468!10730-110B1;0.0276567!10813-111B3;0.0138003!10812-111B2;0.25023!10037-101F1;0.138533!10172-103C1;0.397886!10163-103B1;0.223883!10076-102A4;0.418319!10073-102A1;0.398741!10036-101E9;0.0777909!10195-103E6;0.495854!10277-104E7;0.475519!10434-106E2;0.815127!10550-107I1;0.312946!10545-107H5;0.184045!10544-107H4;0.397036!10704-109H2;0.403915!10510-107D6;0.659891!10558-107I9;0.158441!10020-101D2;0.208932!10732-110B3;0.123238!10049-101G4;0.0108443!10698-109G5;0.00548862!10437-106E5;0.539243!10417-106C3;0.384762!10035-101E8;0.485588!10171-103B9;0.360919!10157-103A4;0.304512!10034-101E7;0.349072!10072-101I9;0.394404!10199-103F1;0.0771267!10200-103F2;0.00685131!10697-109G4;0.00465408!10723-110A3;0.0949285!10179-103C8;0.184228!10160-103A7;0.491456!10180-103C9;0.280823!10162-103A9;0.221804!10021-101D3;0.20611!10840-111E3;0.000101519!10706-109H4;0.0337792!10033-101E6;0.0617594!10032-101E5;0.541052!10490-107B4;0.462729!10439-106E7;0.032302!10022-101D4;0.301489!10176-103C5;0.029149!10469-106I1;0.336725!10067-101I4;0.351035!10411-106B6;0.65258!10471-106I3;0.916469!10030-101E3;0.328254!10475-106I7;0.276636!10787-110H4;0.0734511!10477-106I9;0.117241!10695-109G2;0.0486083!11771-123I7;0.591446!11772-123I8;0.633421!11773-123I9;0.34999!10093-102C3;0.739048!10442-106F1;0.00180171!10442-106F1;0.00387581!10201-103F3;0.00453162!10639-108I9;0.0354771!11843-124H7;0.999601!11841-124H5;0.194938!10693-109F9;0.0183888!10436-106E4;0.945245!10483-107A6;0.32745!10282-104F3;0.304292!10023-101D5;0.0022802!10066-101I3;0.00102691!10065-101I2;0.0177905!10800-110I8;0.0475221!10610-108F7;0.0818089!10841-111E4;0.089794!10541-107H1;0.0194335!10842-111E5;0.0516499!10562-108A4;0.0424601!10024-101D6;0.0510071!10064-101I1;0.0119718!10609-108F6;0.0441282!10048-101G3;0.0164082!10781-110G7;0.137033!10181-103D1;0.0282436!10159-103A6;0.943968!10056-101H2;0.82377!10737-110B8;0.725355!10025-101D7;0.815013!10044-101F8;0.00727266!10424-106D1;0.000930022!10463-106H4;0.149339!10616-108G4;0.236802!10486-107A9;0.478758!10062-101H8;0.272838!10202-103F4;0.0136528!10158-103A5;0.00321618!10441-106E9;0.796259!10031-101E4;0.00262877!10063-101H9;0.592943!10063-101H9;0.0909726!11763-123H8;0.0375642!11765-123I1;0.118295!11768-123I4;0.0766625!10807-111A6;0.0373159!10790-110H7;0.0688105!10798-110I6;0.0207471!10786-110H3;0.302001!10591-108D6;0.028178!10593-108D8;0.00993929!10590-108D5;0.0120276!10026-101D8;0.0295117!10096-102C6;0.0222481!10168-103B6;0.688428!10154-103A1;0.662338!10209-103G2;0.646512!10061-101H7;0.00253011!10027-101D9;0.0240179!10043-101F7;0.592461!10783-110G9;0.641099!10028-101E1;0.203142!10060-101H6;0.00108987!10203-103F5;0.00817497!10059-101H5;0.00271778!10047-101G2;0.00243224!10029-101E2;0.000310562!10058-101H4;0.00074899!10418-106C4;0.00910967!10492-107B6;0.0452572!10694-109G1;0.0413791!10797-110I5;0.765432!10057-101H3;0.434447!10100-102D1;0.0258148!10055-101H1;0.132533!10204-103F6;0.196597!10191-103E2;0.249254!10563-108A5;0.0147661
|name=CNhs12530_bu_f2
|name=CNhs12530_bu_f2
|tomtom_result=znf143#MA0088.1;1;0.000819132;0.389907;0.779814;9;CCTGCCCAG;GATTTCCCATAATGCCTTGC;+!SP1#MA0079.1;2;0.00589909;2.80797;1;8;CCTGCCCAG;ACCCCGCCCC;-!SRF#MA0083.1;-3;0.00619608;2.94934;1;6;CCTGCCCAG;GCCCATATATGG;+!NFIC#MA0161.1;-2;0.00971121;4.62254;1;6;CCTGCCCAG;TGCCAA;-!Tal1::Gata1#MA0140.1;9;0.0122207;5.81707;1;9;CCTGCCCAG;CTTATCTGTCCCCACCAG;-!MZF1_1-4#MA0056.1;-2;0.0136469;6.49595;1;6;CCTGCCCAG;TCCCCA;-!Zfx#MA0146.1;0;0.0191169;9.09963;1;9;CCTGCCCAG;GGGGCCGAGGCCTG;+!ZMS1#MA0441.1;-2;0.0201036;9.56931;1;7;CCTGCCCAG;TTCCCCGCA;+
}}
}}

Latest revision as of 13:57, 7 September 2012

Full Name: CNhs12530_bu_f2

Motif matrix
POACGT
1155.824194035477160.1499007927897472.5132941175810850.866557890615184
2108.21745175706613179.6305883271192841.25201431127922110.25389244099851
311.7457850497406271.1624477522285988152.9270653280964273.51864870639724
40.404413275126312870.1681218363730589351.3056984924840587.47571323247969
50.0439.353946836462850.00.0
60.0439.285499390140160.00.06844744632266782
70.0439.32228077830250.00.03166605816032701
8300.800192320371295.11440590858581.408139165989332542.031209441516815
960.8449014666597677.26930951851513164.23373071145255137.0060051398357

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
znf143#MA0088.110.0008191320.3899070.7798149CCTGCCCAGGATTTCCCATAATGCCTTGC+
SP1#MA0079.120.005899092.8079718CCTGCCCAGACCCCGCCCC-
SRF#MA0083.1-30.006196082.9493416CCTGCCCAGGCCCATATATGG+
NFIC#MA0161.1-20.009711214.6225416CCTGCCCAGTGCCAA-
Tal1::Gata1#MA0140.190.01222075.8170719CCTGCCCAGCTTATCTGTCCCCACCAG-
MZF1_1-4#MA0056.1-20.01364696.4959516CCTGCCCAGTCCCCA-
Zfx#MA0146.100.01911699.0996319CCTGCCCAGGGGGCCGAGGCCTG+
ZMS1#MA0441.1-20.02010369.5693117CCTGCCCAGTTCCCCGCA+
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