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MacroAPE 1083:Motif GACNGT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;1840;0!02;1840;0;0;0!03;0;1840;0;0!04;460;460;460;460!05;0;0;1840;0!06;0;0;0;1840 |macroape_1083_sample_pvalues=11376-118A8;0.898658!1...")
 
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88-110H5;0.28159!10792-110H9;0.485237!10765-110E9;0.424831!10829-111D1;0.542656!10830-111D2;0.699927!10831-111D3;0.555102!10832-111D4;0.964516!10833-111D5;0.580879!10764-110E8;0.627897!10770-110F5;0.994456!10399-106A3;0.993372!10400-106A4;0.885138!10405-106A9;0.892623!10834-111D6;0.927617!10835-111D7;0.707444!10836-111D8;0.444413!10837-111D9;0.942738!10699-109G6;0.842047!10802-111A1;0.444598!10796-110I4;0.761547!10010-101C1;0.910372!10810-111A9;0.891723!10421-106C7;0.795999!10708-109H6;0.223965!12235-129G3;0.984953!12236-129G4;0.930999!12237-129G5;0.615302!10167-103B5;0.603853!10151-102I7;0.500809!10428-106D5;0.643175!10795-110I3;0.148063!10805-111A4;0.707155!10052-101G7;0.763773!10189-103D9;0.818853!10589-108D4;0.386903!10425-106D2;0.790035!10427-106D4;0.484187!10702-109G9;0.446831!10432-106D9;0.435762!10496-107C1;0.97288!10718-109I7;0.870479!10011-101C2;0.74562!10053-101G8;0.977118!10686-109F2;0.789942!10084-102B3;0.907233!10012-101C3;0.610358!10085-102B4;0.580109!10482-107A5;0.499003!10419-106C5;0.261358!10080-102A8;0.266552!10760-110E4;0.243286!10709-109H7;0.854017!10710-109H8;0.700171!10703-109H1;0.922476!10719-109I8;0.579186!10642-109A3;0.882376!10177-103C6;0.480847!10164-103B2;0.655095!10173-103C2;0.705129!10166-103B4;0.901595!10083-102B2;0.923279!10188-103D8;0.777124!10552-107I3;0.523629!10553-107I4;0.989886!10013-101C4;0.293938!10536-107G5;0.981948!10618-108G6;0.734019!10423-106C9;0.526663!10785-110H2;0.987998!12238-129G6;0.941472!12239-129G7;0.86203!12240-129G8;0.542948!10416-106C2;0.603616!10801-110I9;0.655892!10766-110F1;0.778731!10824-111C5;0.778817!10825-111C6;0.693698!10826-111C7;0.680135!10454-106G4;0.590888!10409-106B4;0.723188!10638-108I8;0.577667!10636-108I6;0.547895!10513-107D9;0.79413!10420-106C6;0.906536!10082-102B1;0.636548!10014-101C5;0.789021!10070-101I7;0.638196!10452-106G2;0.802373!10453-106G3;0.476343!10449-106F8;0.62327!10042-101F6;0.604753!10069-101I6;0.913802!10193-103E4;0.894006!10631-108I1;0.643354!10438-106E6;0.17494!10488-107B2;0.678764!10196-103E7;0.740447!10071-101I8;0.625798!10071-101I8;0.701997!10041-101F5;0.827079!10451-106G1;0.846044!10450-106F9;0.6873!10604-108F1;0.953961!10605-108F2;0.699509!10606-108F3;0.993696!10603-108E9;0.783812!10497-107C2;0.915985!10448-106F7;0.659595!10643-109A4;0.64382!10426-106D3;0.564533!10431-106D8;0.982073!10197-103E8;0.860879!10443-106F2;0.905201!10815-111B5;0.579599!10816-111B6;0.972018!10817-111B7;0.892999!10015-101C6;0.986013!10410-106B5;0.822716!10054-101G9;0.867228!10758-110E2;0.855802!10711-109H9;0.785806!10040-101F4;0.682177!10470-106I2;0.62245!10415-106C1;0.649555!10198-103E9;0.754044!10614-108G2;0.966269!10612-108F9;0.475139!10549-107H9;0.643518!10615-108G3;0.863794!10487-107B1;0.463414!10433-106E1;0.935516!10688-109F4;0.899244!10444-106F3;0.992568!10444-106F3;0.33833!10485-107A8;0.309768!10413-106B8;0.755236!10175-103C4;0.657139!10161-103A8;0.595357!12131-128D7;0.830925!10624-108H3;0.751116!10712-109I1;0.407722!10205-103F7;0.100572!10206-103F8;0.658235!10207-103F9;0.708591!10050-101G5;0.915453!10051-101G6;0.541983!10016-101C7;0.767302!10046-101G1;0.831443!10778-110G4;0.649181!10633-108I3;0.35161!10818-111B8;0.826172!10819-111B9;0.786421!10820-111C1;0.775864!10484-107A7;0.757522!10808-111A7;0.598362!10169-103B7;0.332693!10153-102I9;0.625131!13425-144D5;0.673967!13433-144E4;0.873976!13437-144E8;0.786046!11904-125F5;0.71518!11905-125F6;0.895053!10039-101F3;0.941346!10791-110H8;0.574141!10017-101C8;0.627164!10045-101F9;0.9682!10509-107D5;0.925161!10839-111E2;0.512805!10692-109F8;0.644767!10079-102A7;0.764088!10078-102A6;0.764317!10721-110A1;0.803972!10569-108B2;0.634111!10570-108B3;0.261801!10571-108B4;0.290281!10647-109A8;0.245837!10752-110D5;0.512673!10782-110G8;0.547475!10726-110A6;0.581869!10018-101C9;0.585802!10086-102B5;0.86506!10182-103D2;0.753495!10165-103B3;0.708889!10499-107C4;0.779278!10408-106B3;0.792838!10019-101D1;0.848984!10068-101I5;0.862351!10075-102A3;0.76928!10077-102A5;0.700192!10727-110A7;0.361483!10775-110G1;0.347705!10412-106B7;0.455841!12231-129F8;0.727213!12232-129F9;0.708773!12233-129G1;0.451858!12234-129G2;0.359651!10414-106B9;0.226968!10170-103B8;0.960799!10183-103D3;0.558503!10150-102I6;0.540198!10174-103C3;0.634552!10155-103A2;0.878233!10038-101F2;0.944528!10838-111E1;0.820388!10759-110E3;0.874864!10514-107E1;0.522363!10465-106H6;0.835479!10691-109F7;0.62546!10843-111E6;0.589843!10844-111E7;0.668687!11747-123G1;0.977615!11748-123G2;0.816341!11749-123G3;0.697606!11750-123G4;0.863257!11751-123G5;0.0583491!11840-124H4;0.841249!11752-123G6;0.807617!11753-123G7;0.167096!11754-123G8;0.241159!11755-123G9;0.69942!11756-123H1;0.464096!11833-124G6;0.285213!11760-123H5;0.590062!11836-124G9;0.61383!11758-123H3;0.616879!11835-124G8;0.579026!11762-123H7;0.674785!11838-124H2;0.677419!11757-123H2;0.999313!11759-123H4;0.469554!11761-123H6;0.229241!11842-124H6;0.989085!11837-124H1;0.433452!10568-108B1;0.956558!13230-141I8;0.981234!13231-141I9;0.752252!10696-109G3;0.637112!10493-107B7;0.725593!10494-107B8;0.746589!10850-111F4;0.811744!10851-111F5;0.794712!10852-111F6;0.800444!10853-111F7;0.87938!10854-111F8;0.431484!10855-111F9;0.81893!10856-111G1;0.404695!10847-111F1;0.358824!10846-111E9;0.269449!10848-111F2;0.745648!10845-111E8;0.766805!10857-111G2;0.573986!10858-111G3;0.748863!10156-103A3;0.821409!11901-125F2;0.642436!11902-125F3;0.162376!11903-125F4;0.429743!10689-109F5;0.268832!10648-109A9;0.261603!10784-110H1;0.935555!10744-110C6;0.88786!10772-110F7;0.69531!10474-106I6;0.540069!10600-108E6;0.254071!10684-109E9;0.923523!12226-129F3;0.918198!12227-129F4;0.853736!10508-107D4;0.531682!10539-107G8;0.678883!10607-108F4;0.701164!10555-107I6;0.982973!10774-110F9;0.286494!10637-108I7;0.829186!10663-109C6;0.953845!10728-110A8;0.911801!10729-110A9;0.949126!10430-106D7;0.945212!10730-110B1;0.299195!10813-111B3;0.663927!10812-111B2;0.375669!10037-101F1;0.368813!10172-103C1;0.64491!10163-103B1;0.520449!10076-102A4;0.628565!10073-102A1;0.515068!10036-101E9;0.794052!10195-103E6;0.552871!10277-104E7;0.604245!10434-106E2;0.821922!10550-107I1;0.780787!10545-107H5;0.685823!10544-107H4;0.945711!10704-109H2;0.578719!10510-107D6;0.20166!10558-107I9;0.402284!10020-101D2;0.264251!10732-110B3;0.969544!10049-101G4;0.563235!10698-109G5;0.600732!10437-106E5;0.601968!10417-106C3;0.516895!10035-101E8;0.556892!10171-103B9;0.613019!10157-103A4;0.538691!10034-101E7;0.61764!10072-101I9;0.599918!10199-103F1;0.812585!10200-103F2;0.870314!10697-109G4;0.847051!10723-110A3;0.9027!10179-103C8;0.584144!10160-103A7;0.920999!10180-103C9;0.803789!10162-103A9;0.373566!10021-101D3;0.636916!10840-111E3;0.763824!10706-109H4;0.205338!10033-101E6;0.380566!10032-101E5;0.742413!10490-107B4;0.576238!10439-106E7;0.959162!10022-101D4;0.781649!10176-103C5;0.648741!10469-106I1;0.687827!10067-101I4;0.808816!10411-106B6;0.853301!10471-106I3;0.228805!10030-101E3;0.0359974!10475-106I7;0.611403!10787-110H4;0.690854!10477-106I9;0.896555!10695-109G2;0.801216!11771-123I7;0.34954!11772-123I8;0.595531!11773-123I9;0.905743!10093-102C3;0.350446!10442-106F1;0.755185!10442-106F1;0.658972!10201-103F3;0.725628!10639-108I9;0.455809!11843-124H7;0.71455!11841-124H5;0.906783!10693-109F9;0.992042!10436-106E4;0.886365!10483-107A6;0.848035!10282-104F3;0.272824!10023-101D5;0.76553!10066-101I3;0.997212!10065-101I2;0.920779!10800-110I8;0.814723!10610-108F7;0.936889!10841-111E4;0.431269!10541-107H1;0.502423!10842-111E5;0.839156!10562-108A4;0.843163!10024-101D6;0.773864!10064-101I1;0.331445!10609-108F6;0.434029!10048-101G3;0.979218!10781-110G7;0.761655!10181-103D1;0.380439!10159-103A6;0.917669!10056-101H2;0.974343!10737-110B8;0.97395!10025-101D7;0.755006!10044-101F8;0.627061!10424-106D1;0.779304!10463-106H4;0.177777!10616-108G4;0.801775!10486-107A9;0.850124!10062-101H8;0.653113!10202-103F4;0.673134!10158-103A5;0.934505!10441-106E9;0.941565!10031-101E4;0.412186!10063-101H9;0.595894!10063-101H9;0.734541!11763-123H8;0.573645!11765-123I1;0.532675!11768-123I4;0.712186!10807-111A6;0.945968!10790-110H7;0.925485!10798-110I6;0.998173!10786-110H3;0.906266!10591-108D6;0.928451!10593-108D8;0.474693!10590-108D5;0.796183!10026-101D8;0.608487!10096-102C6;0.0992461!10168-103B6;0.0660623!10154-103A1;0.741831!10209-103G2;0.844472!10061-101H7;0.788038!10027-101D9;0.893334!10043-101F7;0.0591874!10783-110G9;0.208015!10028-101E1;0.8363!10060-101H6;0.76093!10203-103F5;0.990165!10059-101H5;0.87918!10047-101G2;0.786781!10029-101E2;0.590598!10058-101H4;0.830618!10418-106C4;0.999244!10492-107B6;0.907267!10694-109G1;0.916842!10797-110I5;0.273285!10057-101H3;0.855981!10100-102D1;0.691622!10055-101H1;0.672023!10204-103F6;0.968001!10191-103E2;0.305218!10563-108A5;0.491315
|name=motif_GACNGT
|name=motif_GACNGT
|tomtom_result=Myb#MA0100.1;0;0.000916729;0.436363;0.872726;6;GACAGT;GGCCGTTG;+!myb.Ph3#MA0054.1;1;0.00499142;2.37591;1;6;GACAGT;AAACGGTTA;-!hth#MA0227.1;1;0.0121937;5.80422;1;5;GACAGT;TGACAG;+!achi#MA0207.1;1;0.0137901;6.56407;1;5;GACAGT;TGACAG;+!Gamyb#MA0034.1;0;0.014375;6.84251;1;6;GACAGT;GGCGGTTGTC;-!ovo#MA0126.1;-1;0.0170084;8.096;1;5;GACAGT;ACTGTTACT;-!prd#MA0239.1;-1;0.0170084;8.096;1;5;GACAGT;ACTGTTACT;-!vis#MA0252.1;1;0.0204191;9.71948;1;5;GACAGT;TGACAG;+
}}
}}

Latest revision as of 13:02, 7 September 2012

Full Name: motif_GACNGT

Motif matrix
POACGT
010018400
021840000
030184000
04460460460460
050018400
060001840

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Myb#MA0100.100.0009167290.4363630.8727266GACAGTGGCCGTTG+
myb.Ph3#MA0054.110.004991422.3759116GACAGTAAACGGTTA-
hth#MA0227.110.01219375.8042215GACAGTTGACAG+
achi#MA0207.110.01379016.5640715GACAGTTGACAG+
Gamyb#MA0034.100.0143756.8425116GACAGTGGCGGTTGTC-
ovo#MA0126.1-10.01700848.09615GACAGTACTGTTACT-
prd#MA0239.1-10.01700848.09615GACAGTACTGTTACT-
vis#MA0252.110.02041919.7194815GACAGTTGACAG+
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